View source for Q element gene transcriptions

{{AE}} Henry A. Hoff

"The basal regulatory elements identified include a putative TATA-box (−30/−24) for RNA polymerase binding and a CAAT box (−64/−61; [...]). Several putative floral expression-related cis-elements identified included a putative 6-nucleotide Q element (−770/−665), three GTGA boxes (−372/−369, −209/−206 and −164/−161) and four putative highly-conserved POLLEN1 boxes (−737/−733, −711/−707, −150/−146 and −36/−32; [...])."<ref name=Ye>{{ cite journal
|author=Zi-Wei Ye, Jie Xu, Jianxin Shi, Dabing Zhang and Mee-Len Chye
|title=Kelch-motif containing acyl-CoA binding proteins AtACBP4 and AtACBP5 are differentially expressed and function in floral lipid metabolism
|journal=Plant Molecular Biology
|date=January 2017
|volume=93
|issue=
|pages=209-225
|url=https://www.researchgate.net/profile/Jianxin_Shi6/publication/309799453_Kelch-motif_containing_acyl-CoA_binding_proteins_AtACBP4_and_AtACBP5_are_differentially_expressed_and_function_in_floral_lipid_metabolism/links/5d11201c458515c11cf5f6b1/Kelch-motif-containing-acyl-CoA-binding-proteins-AtACBP4-and-AtACBP5-are-differentially-expressed-and-function-in-floral-lipid-metabolism.pdf
|arxiv=
|bibcode=
|doi=10.1007/s11103-016-0557-5
|pmid=27826761
|accessdate=7 May 2020 }}</ref>

==Human genes==

==Consensus sequences==

The consensus sequence for a Q element is 3'-AGGTCA-5'.<ref name=Ye/>

==Samplings==
{{main|Model samplings}}
Copying the apparent consensus sequence for the QE (AGGTCA) and putting it in "⌘F" finds two located between ZSCAN22 or three between ZNF497 and A1BG as can be found by the computer programs.

For the Basic programs testing consensus sequence AGGTCA (starting with SuccessablesQE.bas) written to compare nucleotide sequences with the sequences on either the template strand (-), or coding strand (+), of the DNA, in the negative direction (-), or the positive direction (+), the programs are, are looking for, and found:
# negative strand, negative direction, looking for AAAAAAAA, 0.
# positive strand, negative direction, looking for AAAAAAAA, 0.
# positive strand, positive direction, looking for AAAAAAAA, 0.
# negative strand, positive direction, looking for AAAAAAAA, 0.
# complement, negative strand, negative direction, looking for TTTTTTTT, 0.
# complement, positive strand, negative direction, looking for TTTTTTTT, 0.
# complement, positive strand, positive direction, looking for TTTTTTTT, 0.
# complement, negative strand, positive direction, looking for TTTTTTTT, 0.
# inverse complement, negative strand, negative direction, looking for TTTTTTTT, 0.
# inverse complement, positive strand, negative direction, looking for TTTTTTTT, 0.
# inverse complement, positive strand, positive direction, looking for TTTTTTTT, 0.
# inverse complement, negative strand, positive direction, looking for TTTTTTTT, 0.
# inverse negative strand, negative direction, looking for AAAAAAAA, 0.
# inverse positive strand, negative direction, looking for AAAAAAAA, 0.
# inverse positive strand, positive direction, looking for AAAAAAAA, 0.
# inverse negative strand, positive direction, looking for AAAAAAAA, 0.

===QE UTRs===
{{main|UTR promoter gene transcriptions}}

===QE core promoters===
{{main|Core promoter gene transcriptions}}

===QE proximal promoters===
{{main|Proximal promoter gene transcriptions}}

===QE distal promoters===
{{main|Distal promoter gene transcriptions}}

==See also==
{{div col|colwidth=20em}}
* [[Complex locus A1BG and ZNF497]]
* [[Peroxisome proliferator hormone response element gene transcriptions]]
* [[Transcription factor]]
{{Div col end}}

==References==
{{reflist|2}}

==External links==

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{{Gene project}}

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[[Category:Resources last modified in September 2020]]