ST3GAL5: Difference between revisions

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{{Infobox_gene}}
{{GNF_Protein_box
'''Lactosylceramide alpha-2,3-sialyltransferase''' is an [[enzyme]] that in humans is encoded by the ''ST3GAL5'' [[gene]].<ref name="pmid9822625">{{cite journal | vauthors = Ishii A, Ohta M, Watanabe Y, Matsuda K, Ishiyama K, Sakoe K, Nakamura M, Inokuchi J, Sanai Y, Saito M | title = Expression cloning and functional characterization of human cDNA for ganglioside GM3 synthase | journal = J Biol Chem | volume = 273 | issue = 48 | pages = 31652–5 |date=Dec 1998 | pmid = 9822625 | pmc =  | doi =10.1074/jbc.273.48.31652 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=8869| accessdate = }}</ref>
| image = 
| image_source = 
| PDB =
| Name = ST3 beta-galactoside alpha-2,3-sialyltransferase 5
| HGNCid = 10872
| Symbol = ST3GAL5
| AltSymbols =; SIAT9; SIATGM3S; ST3GalV
| OMIM = 604402
| ECnumber = 
| Homologene = 2893
| MGIid = 1339963
| GeneAtlas_image1 = PBB_GE_ST3GAL5_203217_s_at_tn.png
| Function = {{GNF_GO|id=GO:0004513 |text = neolactotetraosylceramide alpha-2,3-sialyltransferase activity}} {{GNF_GO|id=GO:0008373 |text = sialyltransferase activity}} {{GNF_GO|id=GO:0047291 |text = lactosylceramide alpha-2,3-sialyltransferase activity}}
| Component = {{GNF_GO|id=GO:0000139 |text = Golgi membrane}} {{GNF_GO|id=GO:0005887 |text = integral to plasma membrane}} {{GNF_GO|id=GO:0016020 |text = membrane}} {{GNF_GO|id=GO:0030173 |text = integral to Golgi membrane}}
| Process = {{GNF_GO|id=GO:0001574 |text = ganglioside biosynthetic process}} {{GNF_GO|id=GO:0005975 |text = carbohydrate metabolic process}} {{GNF_GO|id=GO:0006486 |text = protein amino acid glycosylation}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 8869
    | Hs_Ensembl = ENSG00000115525
    | Hs_RefseqProtein = NP_001035902
    | Hs_RefseqmRNA = NM_001042437
    | Hs_GenLoc_db =   
    | Hs_GenLoc_chr = 2
    | Hs_GenLoc_start = 85919782
    | Hs_GenLoc_end = 85969648
    | Hs_Uniprot = Q9UNP4
    | Mm_EntrezGene = 20454
    | Mm_Ensembl = ENSMUSG00000056091
    | Mm_RefseqmRNA = NM_001035228
    | Mm_RefseqProtein = NP_001030305
    | Mm_GenLoc_db =   
    | Mm_GenLoc_chr = 6
    | Mm_GenLoc_start = 72027122
    | Mm_GenLoc_end = 72084079
    | Mm_Uniprot = Q3TMT6
  }}
}}
'''ST3 beta-galactoside alpha-2,3-sialyltransferase 5''', also known as '''ST3GAL5''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=8869| accessdate = }}</ref>


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{{PBB_Summary
{{PBB_Summary
| section_title =  
| section_title =  
| summary_text = Ganglioside GM3 is known to participate in the induction of cell differentiation, modulation of cell proliferation, maintenance of fibroblast morphology, signal transduction, and integrin-mediated cell adhesion. The protein encoded by this gene is a type II membrane protein which catalyzes the formation of GM3 using lactosylceramide as the substrate. The encoded protein is a member of glycosyltransferase family 29 and may be localized to the Golgi apparatus. Mutation in this gene has been associated with Amish infantile epilepsy syndrome. Transcript variants encoding different isoforms have been found for this gene.<ref name="entrez">{{cite web | title = Entrez Gene: ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=8869| accessdate = }}</ref>
| summary_text = [[Ganglioside]] GM3 is known to participate in the induction of [[cell differentiation]], modulation of [[cell proliferation]], maintenance of [[fibroblast]] morphology, [[signal transduction]], and integrin-mediated [[cell adhesion]]. The protein encoded by this gene is a type II [[membrane protein]] which catalyzes the formation of GM3 using lactosylceramide as the substrate. The encoded protein is a member of [[glycosyltransferase family 29]] and may be localized to the [[Golgi apparatus]]. Mutation in this gene has been associated with Amish infantile epilepsy syndrome. Transcript variants encoding different [[isoforms]] have been found for this gene.<ref name="entrez" />
}}
}}
[[Mutations]] in this gene have also been associated to ‘Salt & Pepper’ syndrome: an [[autosomal recessive]] condition characterized by severe [[intellectual disability]], [[epilepsy]], [[scoliosis]], [[choreoathetosis]], [[dysmorphic]] facial features and altered [[skin pigmentation|dermal pigmentation]]. (doi: 10.1093/hmg/ddt434)


==References==
==References==
{{reflist|2}}
{{reflist}}
 
==Further reading==
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading  
{{PBB_Further_reading  
| citations =  
| citations =  
*{{cite journal  | author=Bonaldo MF, Lennon G, Soares MB |title=Normalization and subtraction: two approaches to facilitate gene discovery. |journal=Genome Res. |volume=6 |issue= 9 |pages= 791-806 |year= 1997 |pmid= 8889548 |doi= }}
*{{cite journal  | vauthors=Bonaldo MF, Lennon G, Soares MB |title=Normalization and subtraction: two approaches to facilitate gene discovery |journal=Genome Res. |volume=6 |issue= 9 |pages= 791–806 |year= 1997 |pmid= 8889548 |doi=10.1101/gr.6.9.791 }}
*{{cite journal  | author=Ishii A, Ohta M, Watanabe Y, ''et al.'' |title=Expression cloning and functional characterization of human cDNA for ganglioside GM3 synthase. |journal=J. Biol. Chem. |volume=273 |issue= 48 |pages= 31652-5 |year= 1998 |pmid= 9822625 |doi= }}
*{{cite journal   |vauthors=Fukumoto S, Miyazaki H, Goto G, etal |title=Expression cloning of mouse cDNA of CMP-NeuAc:Lactosylceramide alpha2,3-sialyltransferase, an enzyme that initiates the synthesis of gangliosides |journal=J. Biol. Chem. |volume=274 |issue= 14 |pages= 9271–6 |year= 1999 |pmid= 10092602 |doi=10.1074/jbc.274.14.9271 }}
*{{cite journal | author=Fukumoto S, Miyazaki H, Goto G, ''et al.'' |title=Expression cloning of mouse cDNA of CMP-NeuAc:Lactosylceramide alpha2,3-sialyltransferase, an enzyme that initiates the synthesis of gangliosides. |journal=J. Biol. Chem. |volume=274 |issue= 14 |pages= 9271-6 |year= 1999 |pmid= 10092602 |doi=  }}
*{{cite journal  | vauthors=Kapitonov D, Bieberich E, Yu RK |title=Combinatorial PCR approach to homology-based cloning: cloning and expression of mouse and human GM3-synthase |journal=Glycoconj. J. |volume=16 |issue= 7 |pages= 337–50 |year= 2000 |pmid= 10619706 |doi=10.1023/A:1007091926413 }}
*{{cite journal  | author=Kapitonov D, Bieberich E, Yu RK |title=Combinatorial PCR approach to homology-based cloning: cloning and expression of mouse and human GM3-synthase. |journal=Glycoconj. J. |volume=16 |issue= 7 |pages= 337-50 |year= 2000 |pmid= 10619706 |doi=  }}
*{{cite journal   |vauthors=Allende ML, Li J, Darling DS, etal |title=Evidence supporting a late Golgi location for lactosylceramide to ganglioside GM3 conversion |journal=Glycobiology |volume=10 |issue= 10 |pages= 1025–32 |year= 2000 |pmid= 11030748 |doi=10.1093/glycob/10.10.1025 }}
*{{cite journal | author=Allende ML, Li J, Darling DS, ''et al.'' |title=Evidence supporting a late Golgi location for lactosylceramide to ganglioside GM3 conversion. |journal=Glycobiology |volume=10 |issue= 10 |pages= 1025-32 |year= 2000 |pmid= 11030748 |doi=  }}
*{{cite journal   |vauthors=Kim KW, Kim SW, Min KS, etal |title=Genomic structure of human GM3 synthase gene (hST3Gal V) and identification of mRNA isoforms in the 5'-untranslated region |journal=Gene |volume=273 |issue= 2 |pages= 163–71 |year= 2001 |pmid= 11595162 |doi=10.1016/S0378-1119(01)00595-9 }}
*{{cite journal | author=Kim KW, Kim SW, Min KS, ''et al.'' |title=Genomic structure of human GM3 synthase gene (hST3Gal V) and identification of mRNA isoforms in the 5'-untranslated region. |journal=Gene |volume=273 |issue= 2 |pages= 163-71 |year= 2001 |pmid= 11595162 |doi=  }}
*{{cite journal   |vauthors=Kim SW, Lee SH, Kim KS, etal |title=Isolation and characterization of the promoter region of the human GM3 synthase gene |journal=Biochim. Biophys. Acta |volume=1578 |issue= 1–3 |pages= 84–9 |year= 2002 |pmid= 12393190 |doi=  10.1016/s0167-4781(02)00505-5}}
*{{cite journal | author=Kim SW, Lee SH, Kim KS, ''et al.'' |title=Isolation and characterization of the promoter region of the human GM3 synthase gene. |journal=Biochim. Biophys. Acta |volume=1578 |issue= 1-3 |pages= 84-9 |year= 2002 |pmid= 12393190 |doi=  }}
*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 }}
*{{cite journal | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal   |vauthors=Zeng G, Gao L, Xia T, etal |title=Characterization of the 5'-flanking fragment of the human GM3-synthase gene |journal=Biochim. Biophys. Acta |volume=1625 |issue= 1 |pages= 30–5 |year= 2003 |pmid= 12527423 |doi=  10.1016/s0167-4781(02)00573-0}}
*{{cite journal | author=Zeng G, Gao L, Xia T, ''et al.'' |title=Characterization of the 5'-flanking fragment of the human GM3-synthase gene. |journal=Biochim. Biophys. Acta |volume=1625 |issue= 1 |pages= 30-5 |year= 2003 |pmid= 12527423 |doi=  }}
*{{cite journal   |vauthors=Clark HF, Gurney AL, Abaya E, etal |title=The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment |journal=Genome Res. |volume=13 |issue= 10 |pages= 2265–70 |year= 2003 |pmid= 12975309 |doi= 10.1101/gr.1293003 | pmc=403697 }}
*{{cite journal | author=Clark HF, Gurney AL, Abaya E, ''et al.'' |title=The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. |journal=Genome Res. |volume=13 |issue= 10 |pages= 2265-70 |year= 2003 |pmid= 12975309 |doi= 10.1101/gr.1293003 }}
*{{cite journal   |vauthors=Ota T, Suzuki Y, Nishikawa T, etal |title=Complete sequencing and characterization of 21,243 full-length human cDNAs |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal  | vauthors=Chung TW, Choi HJ, Lee YC, Kim CH |title=Molecular mechanism for transcriptional activation of ganglioside GM3 synthase and its function in differentiation of HL-60 cells |journal=Glycobiology |volume=15 |issue= 3 |pages= 233–44 |year= 2005 |pmid= 15385432 |doi= 10.1093/glycob/cwh156 }}
*{{cite journal  | author=Chung TW, Choi HJ, Lee YC, Kim CH |title=Molecular mechanism for transcriptional activation of ganglioside GM3 synthase and its function in differentiation of HL-60 cells. |journal=Glycobiology |volume=15 |issue= 3 |pages= 233-44 |year= 2005 |pmid= 15385432 |doi= 10.1093/glycob/cwh156 }}
*{{cite journal   |vauthors=Simpson MA, Cross H, Proukakis C, etal |title=Infantile-onset symptomatic epilepsy syndrome caused by a homozygous loss-of-function mutation of GM3 synthase |journal=Nat. Genet. |volume=36 |issue= 11 |pages= 1225–9 |year= 2004 |pmid= 15502825 |doi= 10.1038/ng1460 }}
*{{cite journal | author=Simpson MA, Cross H, Proukakis C, ''et al.'' |title=Infantile-onset symptomatic epilepsy syndrome caused by a homozygous loss-of-function mutation of GM3 synthase. |journal=Nat. Genet. |volume=36 |issue= 11 |pages= 1225-9 |year= 2004 |pmid= 15502825 |doi= 10.1038/ng1460 }}
*{{cite journal   |vauthors=Hillier LW, Graves TA, Fulton RS, etal |title=Generation and annotation of the DNA sequences of human chromosomes 2 and 4 |journal=Nature |volume=434 |issue= 7034 |pages= 724–31 |year= 2005 |pmid= 15815621 |doi= 10.1038/nature03466 }}
*{{cite journal | author=Hillier LW, Graves TA, Fulton RS, ''et al.'' |title=Generation and annotation of the DNA sequences of human chromosomes 2 and 4. |journal=Nature |volume=434 |issue= 7034 |pages= 724-31 |year= 2005 |pmid= 15815621 |doi= 10.1038/nature03466 }}
*{{cite journal   |vauthors=Berselli P, Zava S, Sottocornola E, etal |title=Human GM3 synthase: a new mRNA variant encodes an NH2-terminal extended form of the protein |journal=Biochim. Biophys. Acta |volume=1759 |issue= 7 |pages= 348–58 |year= 2006 |pmid= 16934889 |doi= 10.1016/j.bbaexp.2006.07.001 }}
*{{cite journal | author=Berselli P, Zava S, Sottocornola E, ''et al.'' |title=Human GM3 synthase: a new mRNA variant encodes an NH2-terminal extended form of the protein. |journal=Biochim. Biophys. Acta |volume=1759 |issue= 7 |pages= 348-58 |year= 2006 |pmid= 16934889 |doi= 10.1016/j.bbaexp.2006.07.001 }}
*{{cite journal  |vauthors=Szabo R, Skropeta D, etal |title=Advancement of Sialyltransferase Inhibitors: Therapeutic Challenges and Opportunities. |journal=Med. Res. Rev. |volume=37 |pages= 210-270 |year= 2017 |doi= 10.1002/med.21407 }}
}}
}}
{{refend}}
{{refend}}


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Latest revision as of 21:51, 20 February 2018

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Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez

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Ensembl

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UniProt

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RefSeq (mRNA)

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RefSeq (protein)

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Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Lactosylceramide alpha-2,3-sialyltransferase is an enzyme that in humans is encoded by the ST3GAL5 gene.[1][2]

Ganglioside GM3 is known to participate in the induction of cell differentiation, modulation of cell proliferation, maintenance of fibroblast morphology, signal transduction, and integrin-mediated cell adhesion. The protein encoded by this gene is a type II membrane protein which catalyzes the formation of GM3 using lactosylceramide as the substrate. The encoded protein is a member of glycosyltransferase family 29 and may be localized to the Golgi apparatus. Mutation in this gene has been associated with Amish infantile epilepsy syndrome. Transcript variants encoding different isoforms have been found for this gene.[2]

Mutations in this gene have also been associated to ‘Salt & Pepper’ syndrome: an autosomal recessive condition characterized by severe intellectual disability, epilepsy, scoliosis, choreoathetosis, dysmorphic facial features and altered dermal pigmentation. (doi: 10.1093/hmg/ddt434)

References

  1. ↑ Ishii A, Ohta M, Watanabe Y, Matsuda K, Ishiyama K, Sakoe K, Nakamura M, Inokuchi J, Sanai Y, Saito M (Dec 1998). "Expression cloning and functional characterization of human cDNA for ganglioside GM3 synthase". J Biol Chem. 273 (48): 31652–5. doi:10.1074/jbc.273.48.31652. PMID 9822625.
  2. ↑ 2.0 2.1 "Entrez Gene: ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5".

Further reading



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