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{{ | '''Programmed cell death protein 6''' is a [[protein]] that in humans is encoded by the ''PDCD6'' [[gene]].<ref name="pmid8560270">{{cite journal |vauthors=Vito P, Lacana E, D'Adamio L | title = Interfering with apoptosis: Ca(2+)-binding protein ALG-2 and Alzheimer's disease gene ALG-3 | journal = Science | volume = 271 | issue = 5248 | pages = 521–5 | date=February 1996| pmid = 8560270 | pmc = | doi =10.1126/science.271.5248.521 | bibcode =1996Sci...271..521V}}</ref> | ||
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{{PBB_Summary | {{PBB_Summary | ||
| section_title = | | section_title = | ||
| summary_text = This gene encodes a calcium-binding protein belonging to the penta-EF-hand protein family. Calcium binding is important for homodimerization and for conformational changes required for binding to other protein partners. This gene product participates in T cell receptor-, Fas-, and glucocorticoid-induced programmed cell death. In mice deficient for this gene product, however, apoptosis was not blocked suggesting this gene product is functionally redundant.<ref name="entrez">{{cite web | title = Entrez Gene: PDCD6 programmed cell death 6| url = | | summary_text = This gene encodes a calcium-binding protein belonging to the penta-EF-hand protein family. Calcium binding is important for homodimerization and for conformational changes required for binding to other protein partners. This gene product participates in T cell receptor-, Fas-, and glucocorticoid-induced programmed cell death. In mice deficient for this gene product, however, apoptosis was not blocked suggesting this gene product is functionally redundant.<ref name="entrez">{{cite web | title = Entrez Gene: PDCD6 programmed cell death 6| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=10016| accessdate = }}</ref> | ||
}} | }} | ||
==Interactions== | |||
PDCD6 has been shown to [[Protein-protein interaction|interact]] with [[ASK1]],<ref name=pmid12372597>{{cite journal |last=Hwang |first=In-Sik |authorlink= |author2=Jung Yong-Sam |author3=Kim Eunhee |date=October 2002|title=Interaction of ALG-2 with ASK1 influences ASK1 localization and subsequent JNK activation |journal=FEBS Lett. |volume=529 |issue=2–3 |pages=183–7 |publisher= |location = Netherlands| issn = 0014-5793| pmid = 12372597 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |doi=10.1016/S0014-5793(02)03329-X }}</ref> [[PDCD6IP]],<ref name=pmid9880530>{{cite journal |last=Vito |first=P |authorlink= |author2=Pellegrini L |author3=Guiet C |author4=D'Adamio L |date=January 1999|title=Cloning of AIP1, a novel protein that associates with the apoptosis-linked gene ALG-2 in a Ca2+-dependent reaction |journal=J. Biol. Chem. |volume=274 |issue=3 |pages=1533–40 |publisher= |location = UNITED STATES| issn = 0021-9258| pmid = 9880530 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |doi=10.1074/jbc.274.3.1533 }}</ref><ref name=pmid11883939>{{cite journal |last=Satoh |first=Hirokazu |authorlink= |author2=Shibata Hideki |author3=Nakano Yoshimi |author4=Kitaura Yasuyuki |author5=Maki Masatoshi |date=March 2002|title=ALG-2 interacts with the amino-terminal domain of annexin XI in a Ca(2+)-dependent manner |journal=Biochem. Biophys. Res. Commun. |volume=291 |issue=5 |pages=1166–72 |publisher= |location = United States| issn = 0006-291X| pmid = 11883939 |doi = 10.1006/bbrc.2002.6600 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = }}</ref> [[Fas receptor]],<ref name=pmid11606059>{{cite journal |last=Jung |first=Y S |authorlink= |author2=Kim K S |author3=Kim K D |author4=Lim J S |author5=Kim J W |author6=Kim E |date=October 2001|title=Apoptosis-linked gene 2 binds to the death domain of Fas and dissociates from Fas during Fas-mediated apoptosis in Jurkat cells |journal=Biochem. Biophys. Res. Commun. |volume=288 |issue=2 |pages=420–6 |publisher= |location = United States| issn = 0006-291X| pmid = 11606059 |doi = 10.1006/bbrc.2001.5769 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = }}</ref> [[ANXA11]]<ref name=pmid11883939/> and [[PEF1]].<ref name=pmid11278427>{{cite journal |last=Kitaura |first=Y |authorlink= |author2=Matsumoto S |author3=Satoh H |author4=Hitomi K |author5=Maki M |date=April 2001|title=Peflin and ALG-2, members of the penta-EF-hand protein family, form a heterodimer that dissociates in a Ca2+-dependent manner |journal=J. Biol. Chem. |volume=276 |issue=17 |pages=14053–8 |publisher= |location = United States| issn = 0021-9258| pmid = 11278427 |doi = 10.1074/jbc.M008649200 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = }}</ref> | |||
==References== | ==References== | ||
{{reflist | {{reflist}} | ||
==Further reading== | ==Further reading== | ||
{{refbegin | 2}} | {{refbegin | 2}} | ||
{{PBB_Further_reading | {{PBB_Further_reading | ||
| citations = | | citations = | ||
*{{cite journal | | *{{cite journal |vauthors=Krebs J, Klemenz R |title=The ALG-2/AIP-complex, a modulator at the interface between cell proliferation and cell death? A hypothesis |journal=Biochim. Biophys. Acta |volume=1498 |issue= 2–3 |pages= 153–61 |year= 2001 |pmid= 11108958 |doi= 10.1016/S0167-4889(00)00091-4}} | ||
*{{cite journal | | *{{cite journal |vauthors=Maruyama K, Sugano S |title=Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides |journal=Gene |volume=138 |issue= 1–2 |pages= 171–4 |year= 1994 |pmid= 8125298 |doi=10.1016/0378-1119(94)90802-8 }} | ||
*{{cite journal | *{{cite journal |vauthors=Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, etal |title=Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library |journal=Gene |volume=200 |issue= 1–2 |pages= 149–56 |year= 1997 |pmid= 9373149 |doi=10.1016/S0378-1119(97)00411-3 }} | ||
*{{cite journal | | *{{cite journal |vauthors=Vito P, Pellegrini L, Guiet C, D'Adamio L |title=Cloning of AIP1, a novel protein that associates with the apoptosis-linked gene ALG-2 in a Ca2+-dependent reaction |journal=J. Biol. Chem. |volume=274 |issue= 3 |pages= 1533–40 |year= 1999 |pmid= 9880530 |doi=10.1074/jbc.274.3.1533 }} | ||
*{{cite journal | *{{cite journal |vauthors=Tarabykina S, Møller AL, Durussel I, etal |title=Two forms of the apoptosis-linked protein ALG-2 with different Ca(2+) affinities and target recognition |journal=J. Biol. Chem. |volume=275 |issue= 14 |pages= 10514–8 |year= 2000 |pmid= 10744743 |doi=10.1074/jbc.275.14.10514 }} | ||
*{{cite journal | *{{cite journal |vauthors=Chen B, Borinstein SC, Gillis J, etal |title=The glioma-associated protein SETA interacts with AIP1/Alix and ALG-2 and modulates apoptosis in astrocytes |journal=J. Biol. Chem. |volume=275 |issue= 25 |pages= 19275–81 |year= 2000 |pmid= 10858458 |doi= 10.1074/jbc.M908994199 }} | ||
*{{cite journal | *{{cite journal |vauthors=Kitaura Y, Matsumoto S, Satoh H, etal |title=Peflin and ALG-2, members of the penta-EF-hand protein family, form a heterodimer that dissociates in a Ca2+-dependent manner |journal=J. Biol. Chem. |volume=276 |issue= 17 |pages= 14053–8 |year= 2001 |pmid= 11278427 |doi= 10.1074/jbc.M008649200 }} | ||
*{{cite journal | *{{cite journal |vauthors=Suzuki H, Fukunishi Y, Kagawa I, etal |title=Protein–Protein Interaction Panel Using Mouse Full-Length cDNAs |journal=Genome Res. |volume=11 |issue= 10 |pages= 1758–65 |year= 2001 |pmid= 11591653 |doi= 10.1101/gr.180101 | pmc=311163 }} | ||
*{{cite journal | *{{cite journal |vauthors=Jung YS, Kim KS, Kim KD, etal |title=Apoptosis-linked gene 2 binds to the death domain of Fas and dissociates from Fas during Fas-mediated apoptosis in Jurkat cells |journal=Biochem. Biophys. Res. Commun. |volume=288 |issue= 2 |pages= 420–6 |year= 2001 |pmid= 11606059 |doi= 10.1006/bbrc.2001.5769 }} | ||
*{{cite journal | *{{cite journal |vauthors=Kitaura Y, Satoh H, Takahashi H, etal |title=Both ALG-2 and peflin, penta-EF-hand (PEF) proteins, are stabilized by dimerization through their fifth EF-hand regions |journal=Arch. Biochem. Biophys. |volume=399 |issue= 1 |pages= 12–8 |year= 2002 |pmid= 11883899 |doi= 10.1006/abbi.2001.2736 }} | ||
*{{cite journal | *{{cite journal |vauthors=Satoh H, Shibata H, Nakano Y, etal |title=ALG-2 interacts with the amino-terminal domain of annexin XI in a Ca(2+)-dependent manner |journal=Biochem. Biophys. Res. Commun. |volume=291 |issue= 5 |pages= 1166–72 |year= 2002 |pmid= 11883939 |doi= 10.1006/bbrc.2002.6600 }} | ||
*{{cite journal | *{{cite journal |vauthors=Chatellard-Causse C, Blot B, Cristina N, etal |title=Alix (ALG-2-interacting protein X), a protein involved in apoptosis, binds to endophilins and induces cytoplasmic vacuolization |journal=J. Biol. Chem. |volume=277 |issue= 32 |pages= 29108–15 |year= 2002 |pmid= 12034747 |doi= 10.1074/jbc.M204019200 }} | ||
*{{cite journal | | *{{cite journal |vauthors=Hwang IS, Jung YS, Kim E |title=Interaction of ALG-2 with ASK1 influences ASK1 localization and subsequent JNK activation |journal=FEBS Lett. |volume=529 |issue= 2–3 |pages= 183–7 |year= 2002 |pmid= 12372597 |doi=10.1016/S0014-5793(02)03329-X }} | ||
*{{cite journal | | *{{cite journal |vauthors=Satoh H, Nakano Y, Shibata H, Maki M |title=The penta-EF-hand domain of ALG-2 interacts with amino-terminal domains of both annexin VII and annexin XI in a Ca2+-dependent manner |journal=Biochim. Biophys. Acta |volume=1600 |issue= 1–2 |pages= 61–7 |year= 2002 |pmid= 12445460 |doi= 10.1016/S1570-9639(02)00445-4}} | ||
*{{cite journal | | *{{cite journal |vauthors=Krebs J, Saremaslani P, Caduff R |title=ALG-2: a Ca2+ -binding modulator protein involved in cell proliferation and in cell death |journal=Biochim. Biophys. Acta |volume=1600 |issue= 1–2 |pages= 68–73 |year= 2002 |pmid= 12445461 |doi= 10.1016/S1570-9639(02)00446-6}} | ||
*{{cite journal | *{{cite journal |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 |bibcode=2002PNAS...9916899M }} | ||
*{{cite journal | | *{{cite journal |vauthors=Tomsig JL, Snyder SL, Creutz CE |title=Identification of targets for calcium signaling through the copine family of proteins. Characterization of a coiled-coil copine-binding motif |journal=J. Biol. Chem. |volume=278 |issue= 12 |pages= 10048–54 |year= 2003 |pmid= 12522145 |doi= 10.1074/jbc.M212632200 }} | ||
*{{cite journal | *{{cite journal |vauthors=Hansen C, Tarabykina S, la Cour JM, etal |title=The PEF family proteins sorcin and grancalcin interact in vivo and in vitro |journal=FEBS Lett. |volume=545 |issue= 2–3 |pages= 151–4 |year= 2003 |pmid= 12804766 |doi=10.1016/S0014-5793(03)00518-0 }} | ||
}} | }} | ||
{{refend}} | {{refend}} | ||
==External links== | |||
* {{UCSC genome browser|PDCD6}} | |||
* {{UCSC gene details|PDCD6}} | |||
{{PDB Gallery|geneid=10016}} | |||
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{{protein-stub}} | {{protein-stub}} | ||
[[Category:Penta-EF-hand proteins]] |
Latest revision as of 19:39, 25 June 2018
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External IDs | GeneCards: [1] | ||||||
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Species | Human | Mouse | |||||
Entrez |
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Ensembl |
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UniProt |
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RefSeq (mRNA) |
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RefSeq (protein) |
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Location (UCSC) | n/a | n/a | |||||
PubMed search | n/a | n/a | |||||
Wikidata | |||||||
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Programmed cell death protein 6 is a protein that in humans is encoded by the PDCD6 gene.[1]
This gene encodes a calcium-binding protein belonging to the penta-EF-hand protein family. Calcium binding is important for homodimerization and for conformational changes required for binding to other protein partners. This gene product participates in T cell receptor-, Fas-, and glucocorticoid-induced programmed cell death. In mice deficient for this gene product, however, apoptosis was not blocked suggesting this gene product is functionally redundant.[2]
Interactions
PDCD6 has been shown to interact with ASK1,[3] PDCD6IP,[4][5] Fas receptor,[6] ANXA11[5] and PEF1.[7]
References
- ↑ Vito P, Lacana E, D'Adamio L (February 1996). "Interfering with apoptosis: Ca(2+)-binding protein ALG-2 and Alzheimer's disease gene ALG-3". Science. 271 (5248): 521–5. Bibcode:1996Sci...271..521V. doi:10.1126/science.271.5248.521. PMID 8560270.
- ↑ "Entrez Gene: PDCD6 programmed cell death 6".
- ↑ Hwang, In-Sik; Jung Yong-Sam; Kim Eunhee (October 2002). "Interaction of ALG-2 with ASK1 influences ASK1 localization and subsequent JNK activation". FEBS Lett. Netherlands. 529 (2–3): 183–7. doi:10.1016/S0014-5793(02)03329-X. ISSN 0014-5793. PMID 12372597.
- ↑ Vito, P; Pellegrini L; Guiet C; D'Adamio L (January 1999). "Cloning of AIP1, a novel protein that associates with the apoptosis-linked gene ALG-2 in a Ca2+-dependent reaction". J. Biol. Chem. UNITED STATES. 274 (3): 1533–40. doi:10.1074/jbc.274.3.1533. ISSN 0021-9258. PMID 9880530.
- ↑ 5.0 5.1 Satoh, Hirokazu; Shibata Hideki; Nakano Yoshimi; Kitaura Yasuyuki; Maki Masatoshi (March 2002). "ALG-2 interacts with the amino-terminal domain of annexin XI in a Ca(2+)-dependent manner". Biochem. Biophys. Res. Commun. United States. 291 (5): 1166–72. doi:10.1006/bbrc.2002.6600. ISSN 0006-291X. PMID 11883939.
- ↑ Jung, Y S; Kim K S; Kim K D; Lim J S; Kim J W; Kim E (October 2001). "Apoptosis-linked gene 2 binds to the death domain of Fas and dissociates from Fas during Fas-mediated apoptosis in Jurkat cells". Biochem. Biophys. Res. Commun. United States. 288 (2): 420–6. doi:10.1006/bbrc.2001.5769. ISSN 0006-291X. PMID 11606059.
- ↑ Kitaura, Y; Matsumoto S; Satoh H; Hitomi K; Maki M (April 2001). "Peflin and ALG-2, members of the penta-EF-hand protein family, form a heterodimer that dissociates in a Ca2+-dependent manner". J. Biol. Chem. United States. 276 (17): 14053–8. doi:10.1074/jbc.M008649200. ISSN 0021-9258. PMID 11278427.
Further reading
- Krebs J, Klemenz R (2001). "The ALG-2/AIP-complex, a modulator at the interface between cell proliferation and cell death? A hypothesis". Biochim. Biophys. Acta. 1498 (2–3): 153–61. doi:10.1016/S0167-4889(00)00091-4. PMID 11108958.
- Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
- Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
- Vito P, Pellegrini L, Guiet C, D'Adamio L (1999). "Cloning of AIP1, a novel protein that associates with the apoptosis-linked gene ALG-2 in a Ca2+-dependent reaction". J. Biol. Chem. 274 (3): 1533–40. doi:10.1074/jbc.274.3.1533. PMID 9880530.
- Tarabykina S, Møller AL, Durussel I, et al. (2000). "Two forms of the apoptosis-linked protein ALG-2 with different Ca(2+) affinities and target recognition". J. Biol. Chem. 275 (14): 10514–8. doi:10.1074/jbc.275.14.10514. PMID 10744743.
- Chen B, Borinstein SC, Gillis J, et al. (2000). "The glioma-associated protein SETA interacts with AIP1/Alix and ALG-2 and modulates apoptosis in astrocytes". J. Biol. Chem. 275 (25): 19275–81. doi:10.1074/jbc.M908994199. PMID 10858458.
- Kitaura Y, Matsumoto S, Satoh H, et al. (2001). "Peflin and ALG-2, members of the penta-EF-hand protein family, form a heterodimer that dissociates in a Ca2+-dependent manner". J. Biol. Chem. 276 (17): 14053–8. doi:10.1074/jbc.M008649200. PMID 11278427.
- Suzuki H, Fukunishi Y, Kagawa I, et al. (2001). "Protein–Protein Interaction Panel Using Mouse Full-Length cDNAs". Genome Res. 11 (10): 1758–65. doi:10.1101/gr.180101. PMC 311163. PMID 11591653.
- Jung YS, Kim KS, Kim KD, et al. (2001). "Apoptosis-linked gene 2 binds to the death domain of Fas and dissociates from Fas during Fas-mediated apoptosis in Jurkat cells". Biochem. Biophys. Res. Commun. 288 (2): 420–6. doi:10.1006/bbrc.2001.5769. PMID 11606059.
- Kitaura Y, Satoh H, Takahashi H, et al. (2002). "Both ALG-2 and peflin, penta-EF-hand (PEF) proteins, are stabilized by dimerization through their fifth EF-hand regions". Arch. Biochem. Biophys. 399 (1): 12–8. doi:10.1006/abbi.2001.2736. PMID 11883899.
- Satoh H, Shibata H, Nakano Y, et al. (2002). "ALG-2 interacts with the amino-terminal domain of annexin XI in a Ca(2+)-dependent manner". Biochem. Biophys. Res. Commun. 291 (5): 1166–72. doi:10.1006/bbrc.2002.6600. PMID 11883939.
- Chatellard-Causse C, Blot B, Cristina N, et al. (2002). "Alix (ALG-2-interacting protein X), a protein involved in apoptosis, binds to endophilins and induces cytoplasmic vacuolization". J. Biol. Chem. 277 (32): 29108–15. doi:10.1074/jbc.M204019200. PMID 12034747.
- Hwang IS, Jung YS, Kim E (2002). "Interaction of ALG-2 with ASK1 influences ASK1 localization and subsequent JNK activation". FEBS Lett. 529 (2–3): 183–7. doi:10.1016/S0014-5793(02)03329-X. PMID 12372597.
- Satoh H, Nakano Y, Shibata H, Maki M (2002). "The penta-EF-hand domain of ALG-2 interacts with amino-terminal domains of both annexin VII and annexin XI in a Ca2+-dependent manner". Biochim. Biophys. Acta. 1600 (1–2): 61–7. doi:10.1016/S1570-9639(02)00445-4. PMID 12445460.
- Krebs J, Saremaslani P, Caduff R (2002). "ALG-2: a Ca2+ -binding modulator protein involved in cell proliferation and in cell death". Biochim. Biophys. Acta. 1600 (1–2): 68–73. doi:10.1016/S1570-9639(02)00446-6. PMID 12445461.
- Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
- Tomsig JL, Snyder SL, Creutz CE (2003). "Identification of targets for calcium signaling through the copine family of proteins. Characterization of a coiled-coil copine-binding motif". J. Biol. Chem. 278 (12): 10048–54. doi:10.1074/jbc.M212632200. PMID 12522145.
- Hansen C, Tarabykina S, la Cour JM, et al. (2003). "The PEF family proteins sorcin and grancalcin interact in vivo and in vitro". FEBS Lett. 545 (2–3): 151–4. doi:10.1016/S0014-5793(03)00518-0. PMID 12804766.
External links
- PDCD6 human gene location in the UCSC Genome Browser.
- PDCD6 human gene details in the UCSC Genome Browser.
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