RNF5: Difference between revisions

Jump to navigation Jump to search
VisualWikitext
m (Robot: Automated text replacement (-{{reflist}} +{{reflist|2}}, -<references /> +{{reflist|2}}, -{{WikiDoc Cardiology Network Infobox}} +))
 
imported>Boghog
(removed no longer needed PBB controls and templates consistent citation formatting; removed further reading citations not specific to this gene; consistent citation formattingo)
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{Infobox_gene}}
{{PBB_Controls
'''E3 ubiquitin-protein ligase RNF5''' is an [[enzyme]] that in humans is encoded by the ''RNF5'' [[gene]].<ref name="pmid9533025">{{cite journal | vauthors = Kyushiki H, Kuga Y, Suzuki M, Takahashi E, Horie M | title = Cloning, expression and mapping of a novel RING-finger gene (RNF5), a human homologue of a putative zinc-finger gene from Caenorhabditis elegans | journal = Cytogenetics and Cell Genetics | volume = 79 | issue = 1-2 | pages = 114–7 | date = Apr 1998 | pmid = 9533025 | pmc =  | doi = 10.1159/000134695 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: RNF5 ring finger protein 5| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=6048| access-date = }}</ref>
| update_page = yes
| require_manual_inspection = no
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}


<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
== Function ==
{{GNF_Protein_box
| image =
| image_source =
| PDB =
| Name = Ring finger protein 5
| HGNCid = 10068
| Symbol = RNF5
| AltSymbols =; RING5; RMA1
| OMIM = 602677
| ECnumber = 
| Homologene = 56004
| MGIid = 1860076
| GeneAtlas_image1 = PBB_GE_RNF5_209111_at_tn.png
| Function = {{GNF_GO|id=GO:0005515 |text = protein binding}} {{GNF_GO|id=GO:0008270 |text = zinc ion binding}} {{GNF_GO|id=GO:0016874 |text = ligase activity}} {{GNF_GO|id=GO:0046872 |text = metal ion binding}}
| Component = {{GNF_GO|id=GO:0016020 |text = membrane}} {{GNF_GO|id=GO:0016021 |text = integral to membrane}}
| Process = {{GNF_GO|id=GO:0006512 |text = ubiquitin cycle}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 6048
    | Hs_Ensembl = ENSG00000183574
    | Hs_RefseqProtein = NP_008844
    | Hs_RefseqmRNA = NM_006913
    | Hs_GenLoc_db = 
    | Hs_GenLoc_chr = c6_QBL
    | Hs_GenLoc_start = 32246607
    | Hs_GenLoc_end = 32249017
    | Hs_Uniprot = Q99942
    | Mm_EntrezGene = 54197
    | Mm_Ensembl = ENSMUSG00000015478
    | Mm_RefseqmRNA = NM_019403
    | Mm_RefseqProtein = NP_062276
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 17
    | Mm_GenLoc_start = 34209153
    | Mm_GenLoc_end = 34211627
    | Mm_Uniprot = O35445
  }}
}}
'''Ring finger protein 5''', also known as '''RNF5''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: RNF5 ring finger protein 5| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=6048| accessdate = }}</ref>


<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
The protein encoded by this gene contains a [[RING finger domain|RING finger]], which is a motif known to be involved in protein-protein interactions. This protein is a membrane-bound [[ubiquitin ligase]]. It can regulate [[cell motility]] by targeting [[paxillin]] ubiquitination and altering the distribution and localization of paxillin in cytoplasm and cell [[focal adhesion]]s.<ref name="entrez" />
{{PBB_Summary
| section_title =
| summary_text = The protein encoded by this gene contains a RING finger, which is a motif known to be involved in protein-protein interactions. This protein is a membrane-bound ubiquitin ligase. It can regulate cell motility by targeting paxillin ubiquitination and altering the distribution and localization of paxillin in cytoplasm and cell focal adhesions.<ref name="entrez">{{cite web | title = Entrez Gene: RNF5 ring finger protein 5| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=6048| accessdate = }}</ref>
}}


==See also==
== References ==
* [[RING finger domain]]
{{reflist}}


==References==
== Further reading ==
{{reflist|2}}
 
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading
* {{cite journal | vauthors = Kendall E, Sargent CA, Campbell RD | title = Human major histocompatibility complex contains a new cluster of genes between the HLA-D and complement C4 loci | journal = Nucleic Acids Research | volume = 18 | issue = 24 | pages = 7251–7 | date = December 1990 | pmid = 2259622 | pmc = 332860 | doi = 10.1093/nar/18.24.7251 }}
| citations =
* {{cite journal | vauthors = Bonaldo MF, Lennon G, Soares MB | title = Normalization and subtraction: two approaches to facilitate gene discovery | journal = Genome Research | volume = 6 | issue = 9 | pages = 791–806 | date = September 1996 | pmid = 8889548 | doi = 10.1101/gr.6.9.791 }}
*{{cite journal | author=Kendall E, Sargent CA, Campbell RD |title=Human major histocompatibility complex contains a new cluster of genes between the HLA-D and complement C4 loci. |journal=Nucleic Acids Res. |volume=18 |issue= 24 |pages= 7251-7 |year= 1991 |pmid= 2259622 |doi= }}
* {{cite journal | vauthors = Barritt DS, Pearn MT, Zisch AH, Lee SS, Javier RT, Pasquale EB, Stallcup WB | title = The multi-PDZ domain protein MUPP1 is a cytoplasmic ligand for the membrane-spanning proteoglycan NG2 | journal = Journal of Cellular Biochemistry | volume = 79 | issue = 2 | pages = 213–24 | date = August 2000 | pmid = 10967549 | pmc = 3501957 | doi = 10.1002/1097-4644(20001101)79:2<213::AID-JCB50>3.0.CO;2-G }}
*{{cite journal | author=Bonaldo MF, Lennon G, Soares MB |title=Normalization and subtraction: two approaches to facilitate gene discovery. |journal=Genome Res. |volume=6 |issue= 9 |pages= 791-806 |year= 1997 |pmid= 8889548 |doi= }}
* {{cite journal | vauthors = Matsuda N, Suzuki T, Tanaka K, Nakano A | title = Rma1, a novel type of RING finger protein conserved from Arabidopsis to human, is a membrane-bound ubiquitin ligase | journal = Journal of Cell Science | volume = 114 | issue = Pt 10 | pages = 1949–57 | date = May 2001 | pmid = 11329381 | doi =  }}
*{{cite journal  | author=Kyushiki H, Kuga Y, Suzuki M, ''et al.'' |title=Cloning, expression and mapping of a novel RING-finger gene (RNF5), a human homologue of a putative zinc-finger gene from Caenorhabditis elegans. |journal=Cytogenet. Cell Genet. |volume=79 |issue= 1-2 |pages= 114-7 |year= 1998 |pmid= 9533025 |doi=  }}
* {{cite journal | vauthors = Pouly S, Prat A, Blain M, Olivier A, Antel J | title = NG2 immunoreactivity on human brain endothelial cells | journal = Acta Neuropathologica | volume = 102 | issue = 4 | pages = 313–20 | date = October 2001 | pmid = 11603805 | doi = 10.1007/s004010000350 }}
*{{cite journal | author=Barritt DS, Pearn MT, Zisch AH, ''et al.'' |title=The multi-PDZ domain protein MUPP1 is a cytoplasmic ligand for the membrane-spanning proteoglycan NG2. |journal=J. Cell. Biochem. |volume=79 |issue= 2 |pages= 213-24 |year= 2000 |pmid= 10967549 |doi= }}
* {{cite journal | vauthors = Didier C, Broday L, Bhoumik A, Israeli S, Takahashi S, Nakayama K, Thomas SM, Turner CE, Henderson S, Sabe H, Ronai Z | title = RNF5, a RING finger protein that regulates cell motility by targeting paxillin ubiquitination and altered localization | journal = Molecular and Cellular Biology | volume = 23 | issue = 15 | pages = 5331–45 | date = August 2003 | pmid = 12861019 | pmc = 165736 | doi = 10.1128/MCB.23.15.5331-5345.2003 }}
*{{cite journal | author=Matsuda N, Suzuki T, Tanaka K, Nakano A |title=Rma1, a novel type of RING finger protein conserved from Arabidopsis to human, is a membrane-bound ubiquitin ligase. |journal=J. Cell. Sci. |volume=114 |issue= Pt 10 |pages= 1949-57 |year= 2001 |pmid= 11329381 |doi=  }}
* {{cite journal | vauthors = Xie T, Rowen L, Aguado B, Ahearn ME, Madan A, Qin S, Campbell RD, Hood L | title = Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse | journal = Genome Research | volume = 13 | issue = 12 | pages = 2621–36 | date = December 2003 | pmid = 14656967 | pmc = 403804 | doi = 10.1101/gr.1736803 }}
*{{cite journal | author=Pouly S, Prat A, Blain M, ''et al.'' |title=NG2 immunoreactivity on human brain endothelial cells. |journal=Acta Neuropathol. |volume=102 |issue= 4 |pages= 313-20 |year= 2002 |pmid= 11603805 |doi=  }}
* {{cite journal | vauthors = Lehner B, Semple JI, Brown SE, Counsell D, Campbell RD, Sanderson CM | title = Analysis of a high-throughput yeast two-hybrid system and its use to predict the function of intracellular proteins encoded within the human MHC class III region | journal = Genomics | volume = 83 | issue = 1 | pages = 153–67 | date = January 2004 | pmid = 14667819 | doi = 10.1016/S0888-7543(03)00235-0 }}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
* {{cite journal | vauthors = Liu AM, Wong YH | title = G16-mediated activation of nuclear factor kappaB by the adenosine A1 receptor involves c-Src, protein kinase C, and ERK signaling | journal = The Journal of Biological Chemistry | volume = 279 | issue = 51 | pages = 53196–204 | date = December 2004 | pmid = 15485865 | doi = 10.1074/jbc.M410196200 }}
*{{cite journal | author=Didier C, Broday L, Bhoumik A, ''et al.'' |title=RNF5, a RING finger protein that regulates cell motility by targeting paxillin ubiquitination and altered localization. |journal=Mol. Cell. Biol. |volume=23 |issue= 15 |pages= 5331-45 |year= 2003 |pmid= 12861019 |doi= }}
* {{cite journal | vauthors = Barrios-Rodiles M, Brown KR, Ozdamar B, Bose R, Liu Z, Donovan RS, Shinjo F, Liu Y, Dembowy J, Taylor IW, Luga V, Przulj N, Robinson M, Suzuki H, Hayashizaki Y, Jurisica I, Wrana JL | title = High-throughput mapping of a dynamic signaling network in mammalian cells | journal = Science | volume = 307 | issue = 5715 | pages = 1621–5 | date = March 2005 | pmid = 15761153 | doi = 10.1126/science.1105776 }}
*{{cite journal  | author=Mungall AJ, Palmer SA, Sims SK, ''et al.'' |title=The DNA sequence and analysis of human chromosome 6. |journal=Nature |volume=425 |issue= 6960 |pages= 805-11 |year= 2003 |pmid= 14574404 |doi= 10.1038/nature02055 }}
* {{cite journal | vauthors = Zhang Y, Higashide W, Dai S, Sherman DM, Zhou D | title = Recognition and ubiquitination of Salmonella type III effector SopA by a ubiquitin E3 ligase, HsRMA1 | journal = The Journal of Biological Chemistry | volume = 280 | issue = 46 | pages = 38682–8 | date = November 2005 | pmid = 16176924 | doi = 10.1074/jbc.M506309200 }}
*{{cite journal | author=Xie T, Rowen L, Aguado B, ''et al.'' |title=Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse. |journal=Genome Res. |volume=13 |issue= 12 |pages= 2621-36 |year= 2004 |pmid= 14656967 |doi= 10.1101/gr.1736803 }}
* {{cite journal | vauthors = Younger JM, Chen L, Ren HY, Rosser MF, Turnbull EL, Fan CY, Patterson C, Cyr DM | title = Sequential quality-control checkpoints triage misfolded cystic fibrosis transmembrane conductance regulator | journal = Cell | volume = 126 | issue = 3 | pages = 571–82 | date = August 2006 | pmid = 16901789 | doi = 10.1016/j.cell.2006.06.041 }}
*{{cite journal | author=Lehner B, Semple JI, Brown SE, ''et al.'' |title=Analysis of a high-throughput yeast two-hybrid system and its use to predict the function of intracellular proteins encoded within the human MHC class III region. |journal=Genomics |volume=83 |issue= 1 |pages= 153-67 |year= 2004 |pmid= 14667819 |doi= }}
* {{cite journal | vauthors = Bromberg KD, Kluger HM, Delaunay A, Abbas S, DiVito KA, Krajewski S, Ronai Z | title = Increased expression of the E3 ubiquitin ligase RNF5 is associated with decreased survival in breast cancer | journal = Cancer Research | volume = 67 | issue = 17 | pages = 8172–9 | date = September 2007 | pmid = 17804730 | pmc = 2962863 | doi = 10.1158/0008-5472.CAN-07-0045 }}
*{{cite journal | author=Liu AM, Wong YH |title=G16-mediated activation of nuclear factor kappaB by the adenosine A1 receptor involves c-Src, protein kinase C, and ERK signaling. |journal=J. Biol. Chem. |volume=279 |issue= 51 |pages= 53196-204 |year= 2005 |pmid= 15485865 |doi= 10.1074/jbc.M410196200 }}
* {{cite journal | vauthors = Fujita Y, Khateb A, Li Y, Tinoco R, Zhang T, Bar-Yoseph H, Tam MA, Chowers Y, Sabo E, Gerassy-Vainberg S, Starosvetsky E, James B, Brown K, Shen-Orr SS, Bradley LM, Tessier PA, Ronai ZA | title = Regulation of S100A8 Stability by RNF5 in Intestinal Epithelial Cells Determines Intestinal Inflammation and Severity of Colitis | journal = Cell Reports | volume = 24 | issue = 12 | pages = 3296–3311.e6 | date = September 2018 | pmid = 30232010 | doi = 10.1016/j.celrep.2018.08.057 }}
*{{cite journal | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{cite journal  | author=Barrios-Rodiles M, Brown KR, Ozdamar B, ''et al.'' |title=High-throughput mapping of a dynamic signaling network in mammalian cells. |journal=Science |volume=307 |issue= 5715 |pages= 1621-5 |year= 2005 |pmid= 15761153 |doi= 10.1126/science.1105776 }}
*{{cite journal | author=Zhang Y, Higashide W, Dai S, ''et al.'' |title=Recognition and ubiquitination of Salmonella type III effector SopA by a ubiquitin E3 ligase, HsRMA1. |journal=J. Biol. Chem. |volume=280 |issue= 46 |pages= 38682-8 |year= 2006 |pmid= 16176924 |doi= 10.1074/jbc.M506309200 }}
*{{cite journal | author=Rual JF, Venkatesan K, Hao T, ''et al.'' |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173-8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
*{{cite journal  | author=Younger JM, Chen L, Ren HY, ''et al.'' |title=Sequential quality-control checkpoints triage misfolded cystic fibrosis transmembrane conductance regulator. |journal=Cell |volume=126 |issue= 3 |pages= 571-82 |year= 2006 |pmid= 16901789 |doi= 10.1016/j.cell.2006.06.041 }}
*{{cite journal | author=Bromberg KD, Kluger HM, Delaunay A, ''et al.'' |title=Increased expression of the E3 ubiquitin ligase RNF5 is associated with decreased survival in breast cancer. |journal=Cancer Res. |volume=67 |issue= 17 |pages= 8172-9 |year= 2007 |pmid= 17804730 |doi= 10.1158/0008-5472.CAN-07-0045 }}
}}
{{refend}}
{{refend}}


== External links ==
== External links ==
* {{MeshName|RNF5+protein,+human}}
* {{MeshName|RNF5+protein,+human}}
[[Category:RING finger proteins]]


{{protein-stub}}
{{protein-stub}}
{{WikiDoc Sources}}

Latest revision as of 10:11, 21 September 2018

VALUE_ERROR (nil)
Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez

n/a

n/a

Ensembl

n/a

n/a

UniProt

n/a

n/a

RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

E3 ubiquitin-protein ligase RNF5 is an enzyme that in humans is encoded by the RNF5 gene.[1][2]

Function

The protein encoded by this gene contains a RING finger, which is a motif known to be involved in protein-protein interactions. This protein is a membrane-bound ubiquitin ligase. It can regulate cell motility by targeting paxillin ubiquitination and altering the distribution and localization of paxillin in cytoplasm and cell focal adhesions.[2]

References

  1. ↑ Kyushiki H, Kuga Y, Suzuki M, Takahashi E, Horie M (Apr 1998). "Cloning, expression and mapping of a novel RING-finger gene (RNF5), a human homologue of a putative zinc-finger gene from Caenorhabditis elegans". Cytogenetics and Cell Genetics. 79 (1–2): 114–7. doi:10.1159/000134695. PMID 9533025.
  2. ↑ 2.0 2.1 "Entrez Gene: RNF5 ring finger protein 5".

Further reading

External links

Retrieved from "https://www.wikidoc.org/index.php?title=RNF5&oldid=1533254"