ARHGAP26: Difference between revisions

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Identifiers
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Orthologs
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Latest revision as of 15:11, 26 January 2018

Rho GTPase activating protein 26 (ARHGAP26) also known as GTPase Regulator Associated with Focal Adhesion Kinase (GRAF) is a protein that in humans is encoded by the ARHGAP26 gene.^[1]^[2]^[3]

Function

GRAF1 is a multidomain protein that is necessary for the CLIC/GEEC endocytic pathway.^[4] By virtue of an N-terminal BAR domain, GRAF1 sculpts the endocytic membranes of this pathway into 40 nm diameter tubules and vesicles that allow uptake of extracellular fluid, GPI-linked proteins and certain bacterial exotoxins into cells. The role of dynamin in the CLIC/GEEC pathway is controversial, but GRAF1 interacts strongly with this protein and acute inhibition of dynamin action abrogates CLIC/GEEC endocytosis. There are several members of the GRAF family of proteins, including GRAF2, GRAF3, and oligophrenin, all of which likely playing similar roles during clathrin-independent endocytic events. Mutations of both GRAF1 and oligophrenin are strongly implicated in causing human disease (leukaemia and mental retardation, respectively). Recently, autoantibodies to ARHGAP26 have been implicated in autoimmune cerebellar ataxia.^[5]^[6]^[7]

Interactions

ARHGAP26 has been shown to interact with PKN3.^[8]

References

↑ "Entrez Gene: ARHGAP26 Rho GTPase activating protein 26".
↑ Hildebrand JD, Taylor JM, Parsons JT (June 1996). "An SH3 domain-containing GTPase-activating protein for Rho and Cdc42 associates with focal adhesion kinase". Mol. Cell. Biol. 16 (6): 3169–78. PMC 231310. PMID 8649427.
↑ Taylor JM, Macklem MM, Parsons JT (January 1999). "Cytoskeletal changes induced by GRAF, the GTPase regulator associated with focal adhesion kinase, are mediated by Rho". J. Cell Sci. 112 (2): 231–42. PMID 9858476.
↑ Lundmark R, Doherty GJ, Howes MT, Cortese K, Vallis Y, Parton RG, McMahon HT (November 2008). "The GTPase-activating protein GRAF1 regulates the CLIC/GEEC endocytic pathway". Curr. Biol. 18 (22): 1802–8. doi:10.1016/j.cub.2008.10.044. PMC 2726289. PMID 19036340.
↑ Jarius S, Wandinger KP, Horn S, Heuer H, Wildemann B (2010). "A new Purkinje cell antibody (anti-Ca) associated with subacute cerebellar ataxia: immunological characterization". J Neuroinflammation. 7 (1): 21. doi:10.1186/1742-2094-7-21. PMC 2848133. PMID 20226058.
↑ Jarius S, Martínez-García P, Hernandez AL, Brase JC, Borowski K, Regula JU, Meinck HM, Stöcker W, Wildemann B, Wandinger KP (Jan 2013). "Two new cases of anti-Ca (anti-ARHGAP26/GRAF) autoantibody-associated cerebellar ataxia". J Neuroinflammation. 10 (1): 7. doi:10.1186/1742-2094-10-7. PMC 3549891. PMID 23320754.
↑ Doss S, Nümann A, Ziegler A, Siebert E, Borowski K, Stöcker W, Prüss H, Wildemann B, Endres M, Jarius S (15 Feb 2014). "Anti-Ca/anti-ARHGAP26 antibodies associated with cerebellar atrophy and cognitive decline". J. Neuroimmunol. 267 (1–2): 102–4. doi:10.1016/j.jneuroim.2013.10.010. PMID 24439423.
↑ Shibata H, Oishi K, Yamagiwa A, Matsumoto M, Mukai H, Ono Y (2001). "PKNbeta interacts with the SH3 domains of Graf and a novel Graf related protein, Graf2, which are GTPase activating proteins for Rho family". J. Biochem. 130 (1): 23–31. doi:10.1093/oxfordjournals.jbchem.a002958. PMID 11432776.

External links

ARHGAP26 Info with links in the Cell Migration Gateway
Human ARHGAP26 genome location and ARHGAP26 gene details page in the UCSC Genome Browser.

This article on a gene on human chromosome 5 is a stub. You can help Wikipedia by expanding it.

[entrez-1] "Entrez Gene: ARHGAP26 Rho GTPase activating protein 26".

[pmid8649427-2] Hildebrand JD, Taylor JM, Parsons JT (June 1996). "An SH3 domain-containing GTPase-activating protein for Rho and Cdc42 associates with focal adhesion kinase". Mol. Cell. Biol. 16 (6): 3169–78. PMC 231310. PMID 8649427.

[pmid9858476-3] Taylor JM, Macklem MM, Parsons JT (January 1999). "Cytoskeletal changes induced by GRAF, the GTPase regulator associated with focal adhesion kinase, are mediated by Rho". J. Cell Sci. 112 (2): 231–42. PMID 9858476.

[pmid19036340-4] Lundmark R, Doherty GJ, Howes MT, Cortese K, Vallis Y, Parton RG, McMahon HT (November 2008). "The GTPase-activating protein GRAF1 regulates the CLIC/GEEC endocytic pathway". Curr. Biol. 18 (22): 1802–8. doi:10.1016/j.cub.2008.10.044. PMC 2726289. PMID 19036340.

[pmid20226058-5] Jarius S, Wandinger KP, Horn S, Heuer H, Wildemann B (2010). "A new Purkinje cell antibody (anti-Ca) associated with subacute cerebellar ataxia: immunological characterization". J Neuroinflammation. 7 (1): 21. doi:10.1186/1742-2094-7-21. PMC 2848133. PMID 20226058.

[pmid23320754-6] Jarius S, Martínez-García P, Hernandez AL, Brase JC, Borowski K, Regula JU, Meinck HM, Stöcker W, Wildemann B, Wandinger KP (Jan 2013). "Two new cases of anti-Ca (anti-ARHGAP26/GRAF) autoantibody-associated cerebellar ataxia". J Neuroinflammation. 10 (1): 7. doi:10.1186/1742-2094-10-7. PMC 3549891. PMID 23320754.

[pmid24439423-7] Doss S, Nümann A, Ziegler A, Siebert E, Borowski K, Stöcker W, Prüss H, Wildemann B, Endres M, Jarius S (15 Feb 2014). "Anti-Ca/anti-ARHGAP26 antibodies associated with cerebellar atrophy and cognitive decline". J. Neuroimmunol. 267 (1–2): 102–4. doi:10.1016/j.jneuroim.2013.10.010. PMID 24439423.

[pmid11432776-8] Shibata H, Oishi K, Yamagiwa A, Matsumoto M, Mukai H, Ono Y (2001). "PKNbeta interacts with the SH3 domains of Graf and a novel Graf related protein, Graf2, which are GTPase activating proteins for Rho family". J. Biochem. 130 (1): 23–31. doi:10.1093/oxfordjournals.jbchem.a002958. PMID 11432776.

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@@ Line 1: / Line 1: @@
-<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
+{{Infobox_gene}}
-{{PBB_Controls
+'''Rho GTPase activating protein 26''' ('''ARHGAP26''') also known as '''<u>G</u>TPase <u>R</u>egulator <u>A</u>ssociated with <u>F</u>ocal Adhesion Kinase''' ('''GRAF''') is a [[protein]] that in humans is encoded by the ''ARHGAP26'' [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: ARHGAP26 Rho GTPase activating protein 26| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=23092| accessdate = }}</ref><ref name="pmid8649427">{{cite journal | vauthors = Hildebrand JD, Taylor JM, Parsons JT | title = An SH3 domain-containing GTPase-activating protein for Rho and Cdc42 associates with focal adhesion kinase | journal = Mol. Cell. Biol. | volume = 16 | issue = 6 | pages = 3169–78  | date = June 1996 | pmid = 8649427 | pmc = 231310 | doi =  | url = http://mcb.asm.org/cgi/pmidlookup?view=long&pmid=8649427 }}</ref><ref name="pmid9858476">{{cite journal | vauthors = Taylor JM, Macklem MM, Parsons JT | title = Cytoskeletal changes induced by GRAF, the GTPase regulator associated with focal adhesion kinase, are mediated by Rho | journal = J. Cell Sci. | volume = 112 | issue =  2| pages = 231–42  | date = January 1999 | pmid = 9858476 | doi =  | url = http://jcs.biologists.org/cgi/pmidlookup?view=long&pmid=9858476 }}</ref>
-| update_page = yes
-| require_manual_inspection = no
-| update_protein_box = yes
-| update_summary = yes
-| update_citations = yes
-}}
-<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
+== Function ==
-{{GNF_Protein_box
+GRAF1 is a multidomain protein that is necessary for the [[Clathrin-independent carrier|CLIC]]/[[GEEC]] endocytic pathway.<ref name="pmid19036340">{{cite journal | vauthors = Lundmark R, Doherty GJ, Howes MT, Cortese K, Vallis Y, Parton RG, McMahon HT | title = The GTPase-activating protein GRAF1 regulates the CLIC/GEEC endocytic pathway | journal = Curr. Biol. | volume = 18 | issue = 22 | pages = 1802–8  | date = November 2008 | pmid = 19036340 | pmc = 2726289 | doi = 10.1016/j.cub.2008.10.044 }}</ref>  By virtue of an N-terminal [[BAR domain]], GRAF1 sculpts the endocytic membranes of this pathway into 40&nbsp;nm diameter tubules and vesicles that allow uptake of extracellular fluid, GPI-linked proteins and certain bacterial exotoxins into cells.  The role of [[dynamin]] in the CLIC/GEEC pathway is controversial, but GRAF1 interacts strongly with this protein and acute inhibition of [[dynamin]] action abrogates CLIC/GEEC [[endocytosis]].  There are several members of the GRAF family of proteins, including [[ARHGAP10|GRAF2]], GRAF3, and [[oligophrenin]], all of which likely playing similar roles during clathrin-independent endocytic events.  Mutations of both GRAF1 and oligophrenin are strongly implicated in causing human disease ([[leukaemia]] and [[mental retardation]], respectively). Recently, [[autoantibody|autoantibodies]] to ARHGAP26 have been implicated in autoimmune [[cerebellar ataxia]].<ref name="pmid20226058">{{cite journal | vauthors = Jarius S, Wandinger KP, Horn S, Heuer H, Wildemann B | title = A new Purkinje cell antibody (anti-Ca) associated with subacute cerebellar ataxia: immunological characterization | journal = J Neuroinflammation | volume = 7 | issue = 1 | pages = 21 | year = 2010 | pmid = 20226058 | doi = 10.1186/1742-2094-7-21 | url = http://www.jneuroinflammation.com/content/7/1/21 | pmc=2848133}}</ref><ref name="pmid23320754">{{cite journal | vauthors = Jarius S, Martínez-García P, Hernandez AL, Brase JC, Borowski K, Regula JU, Meinck HM, Stöcker W, Wildemann B, Wandinger KP | title = Two new cases of anti-Ca (anti-ARHGAP26/GRAF) autoantibody-associated cerebellar ataxia | journal = J Neuroinflammation | volume = 10 | issue = 1 | pages = 7  | date = Jan 2013 | pmid = 23320754 | doi = 10.1186/1742-2094-10-7 | url = http://www.jneuroinflammation.com/content/10/1/7 | pmc=3549891}}</ref><ref name="pmid24439423">{{cite journal | vauthors = Doss S, Nümann A, Ziegler A, Siebert E, Borowski K, Stöcker W, Prüss H, Wildemann B, Endres M, Jarius S | title = Anti-Ca/anti-ARHGAP26 antibodies associated with cerebellar atrophy and cognitive decline | journal = J. Neuroimmunol. | volume = 267 | issue = 1–2 | pages = 102–4  | date = 15 Feb 2014 | pmid = 24439423 | doi = 10.1016/j.jneuroim.2013.10.010 | url = http://www.sciencedirect.com/science/article/pii/S0165572813003056 }}</ref>
- | image = PBB_Protein_ARHGAP26_image.jpg
- | image_source = [[Protein_Data_Bank|PDB]] rendering based on 1f7c.
- | PDB = {{PDB2|1f7c}}, {{PDB2|1ugv}}
- | Name = Rho GTPase activating protein 26
- | HGNCid = 17073
- | Symbol = ARHGAP26
- | AltSymbols =; FLJ42530; GRAF; KIAA0621; OPHN1L; OPHN1L1
- | OMIM = 605370
-  | ECnumber =
- | Homologene = 36349
- | MGIid = 1918552
- | GeneAtlas_image1 = PBB_GE_ARHGAP26_205068_s_at_tn.png
-  | GeneAtlas_image2 = PBB_GE_ARHGAP26_205069_s_at_tn.png
-  | GeneAtlas_image3 = PBB_GE_ARHGAP26_215955_x_at_tn.png
-  | Function = {{GNF_GO|id=GO:0005096 |text = GTPase activator activity}} {{GNF_GO|id=GO:0005100 |text = Rho GTPase activator activity}}
- | Component = {{GNF_GO|id=GO:0005575 |text = cellular_component}} {{GNF_GO|id=GO:0005622 |text = intracellular}}
- | Process = {{GNF_GO|id=GO:0007165 |text = signal transduction}} {{GNF_GO|id=GO:0007399 |text = nervous system development}} {{GNF_GO|id=GO:0030036 |text = actin cytoskeleton organization and biogenesis}}
- | Orthologs = {{GNF_Ortholog_box
-    | Hs_EntrezGene = 23092
-    | Hs_Ensembl = ENSG00000145819
-    | Hs_RefseqProtein = NP_055886
-    | Hs_RefseqmRNA = NM_015071
-    | Hs_GenLoc_db =
-    | Hs_GenLoc_chr = 5
-    | Hs_GenLoc_start = 142130133
-    | Hs_GenLoc_end = 142588769
-    | Hs_Uniprot = Q9UNA1
-    | Mm_EntrezGene = 71302
-    | Mm_Ensembl = ENSMUSG00000036452
-    | Mm_RefseqmRNA = XM_988482
-    | Mm_RefseqProtein = XP_993576
-    | Mm_GenLoc_db =
-    | Mm_GenLoc_chr = 18
-    | Mm_GenLoc_start = 39119119
-    | Mm_GenLoc_end = 39502259
-    | Mm_Uniprot =
-  }}
-}}
-'''Rho GTPase activating protein 26''', also known as '''ARHGAP26''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: ARHGAP26 Rho GTPase activating protein 26| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=23092| accessdate = }}</ref>
-<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
+== Interactions ==
-{{PBB_Summary
-| section_title =
-| summary_text =
-}}
-==References==
+ARHGAP26 has been shown to [[Protein-protein interaction|interact]] with [[PKN3 (gene)|PKN3]].<ref name="pmid11432776">{{cite journal | vauthors = Shibata H, Oishi K, Yamagiwa A, Matsumoto M, Mukai H, Ono Y | title = PKNbeta interacts with the SH3 domains of Graf and a novel Graf related protein, Graf2, which are GTPase activating proteins for Rho family | journal = J. Biochem. | volume = 130 | issue = 1 | pages = 23–31 | year = 2001 | pmid = 11432776 | doi = 10.1093/oxfordjournals.jbchem.a002958 }}</ref>
-{{reflist|2}}
-==Further reading==
-{{refbegin | 2}}
-{{PBB_Further_reading
-| citations =
-*{{cite journal  | author=Ramakers GJ |title=Rho proteins, mental retardation and the cellular basis of cognition. |journal=Trends Neurosci. |volume=25 |issue= 4 |pages= 191-9 |year= 2002 |pmid= 11998687 |doi=  }}
-*{{cite journal  | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
-*{{cite journal  | author=Shibata H, Oishi K, Yamagiwa A, ''et al.'' |title=PKNbeta interacts with the SH3 domains of Graf and a novel Graf related protein, Graf2, which are GTPase activating proteins for Rho family. |journal=J. Biochem. |volume=130 |issue= 1 |pages= 23-31 |year= 2001 |pmid= 11432776 |doi=  }}
-*{{cite journal  | author=Borkhardt A, Bojesen S, Haas OA, ''et al.'' |title=The human GRAF gene is fused to MLL in a unique t(5;11)(q31;q23) and both alleles are disrupted in three cases of myelodysplastic syndrome/acute myeloid leukemia with a deletion 5q. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=97 |issue= 16 |pages= 9168-73 |year= 2000 |pmid= 10908648 |doi= 10.1073/pnas.150079597 }}
-*{{cite journal  | author=Dias Neto E, Correa RG, Verjovski-Almeida S, ''et al.'' |title=Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=97 |issue= 7 |pages= 3491-6 |year= 2000 |pmid= 10737800 |doi=  }}
-*{{cite journal  | author=Taylor JM, Macklem MM, Parsons JT |title=Cytoskeletal changes induced by GRAF, the GTPase regulator associated with focal adhesion kinase, are mediated by Rho. |journal=J. Cell. Sci. |volume=112 ( Pt 2) |issue=  |pages= 231-42 |year= 1999 |pmid= 9858476 |doi=  }}
-*{{cite journal  | author=Ishikawa K, Nagase T, Suyama M, ''et al.'' |title=Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. |journal=DNA Res. |volume=5 |issue= 3 |pages= 169-76 |year= 1998 |pmid= 9734811 |doi=  }}
-*{{cite journal  | author=Billuart P, Bienvenu T, Ronce N, ''et al.'' |title=Oligophrenin-1 encodes a rhoGAP protein involved in X-linked mental retardation. |journal=Nature |volume=392 |issue= 6679 |pages= 923-6 |year= 1998 |pmid= 9582072 |doi= 10.1038/31940 }}
-*{{cite journal  | author=Taylor JM, Hildebrand JD, Mack CP, ''et al.'' |title=Characterization of graf, the GTPase-activating protein for rho associated with focal adhesion kinase. Phosphorylation and possible regulation by mitogen-activated protein kinase. |journal=J. Biol. Chem. |volume=273 |issue= 14 |pages= 8063-70 |year= 1998 |pmid= 9525907 |doi=  }}
-*{{cite journal  | author=Hildebrand JD, Taylor JM, Parsons JT |title=An SH3 domain-containing GTPase-activating protein for Rho and Cdc42 associates with focal adhesion kinase. |journal=Mol. Cell. Biol. |volume=16 |issue= 6 |pages= 3169-78 |year= 1996 |pmid= 8649427 |doi=  }}
-*{{cite journal  | author=Pillay TS, Sasaoka T, Olefsky JM |title=Insulin stimulates the tyrosine dephosphorylation of pp125 focal adhesion kinase. |journal=J. Biol. Chem. |volume=270 |issue= 3 |pages= 991-4 |year= 1995 |pmid= 7836419 |doi=  }}
-}}
-{{refend}}
-{{protein-stub}}
+== References ==
-{{WikiDoc Sources}}
+{{Reflist}}
+== Further reading ==
+{{Refbegin | 2}}
+* {{cite journal | vauthors = Ramakers GJ | title = Rho proteins, mental retardation and the cellular basis of cognition | journal = Trends Neurosci. | volume = 25 | issue = 4 | pages = 191–9 | year = 2002 | pmid = 11998687 | doi = 10.1016/S0166-2236(00)02118-4 }}
+* {{cite journal | vauthors = Borkhardt A, Bojesen S, Haas OA, Fuchs U, Bartelheimer D, Loncarevic IF, Bohle RM, Harbott J, Repp R, Jaeger U, Viehmann S, Henn T, Korth P, Scharr D, Lampert F | title = The human GRAF gene is fused to MLL in a unique t(5;11)(q31;q23) and both alleles are disrupted in three cases of myelodysplastic syndrome/acute myeloid leukemia with a deletion 5q | journal = Proc. Natl. Acad. Sci. U.S.A. | volume = 97 | issue = 16 | pages = 9168–73 | year = 2000 | pmid = 10908648 | pmc = 16840 | doi = 10.1073/pnas.150079597 }}
+* {{cite journal | vauthors = Dias Neto E, Correa RG, Verjovski-Almeida S, Briones MR, Nagai MA, da Silva W, Zago MA, Bordin S, Costa FF, Goldman GH, Carvalho AF, Matsukuma A, Baia GS, Simpson DH, Brunstein A, de Oliveira PS, Bucher P, Jongeneel CV, O'Hare MJ, Soares F, Brentani RR, Reis LF, de Souza SJ, Simpson AJ | title = Shotgun sequencing of the human transcriptome with ORF expressed sequence tags | journal = Proc. Natl. Acad. Sci. U.S.A. | volume = 97 | issue = 7 | pages = 3491–6 | year = 2000 | pmid = 10737800 | pmc = 16267 | doi = 10.1073/pnas.97.7.3491 }}
+* {{cite journal | vauthors = Ishikawa K, Nagase T, Suyama M, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O | title = Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro | journal = DNA Res. | volume = 5 | issue = 3 | pages = 169–76 | year = 1998 | pmid = 9734811 | doi = 10.1093/dnares/5.3.169 }}
+* {{cite journal | vauthors = Billuart P, Bienvenu T, Ronce N, des Portes V, Vinet MC, Zemni R, Roest Crollius H, Carrié A, Fauchereau F, Cherry M, Briault S, Hamel B, Fryns JP, Beldjord C, Kahn A, Moraine C, Chelly J | title = Oligophrenin-1 encodes a rhoGAP protein involved in X-linked mental retardation | journal = Nature | volume = 392 | issue = 6679 | pages = 923–6 | year = 1998 | pmid = 9582072 | doi = 10.1038/31940 }}
+* {{cite journal | vauthors = Taylor JM, Hildebrand JD, Mack CP, Cox ME, Parsons JT | title = Characterization of graf, the GTPase-activating protein for rho associated with focal adhesion kinase. Phosphorylation and possible regulation by mitogen-activated protein kinase | journal = J. Biol. Chem. | volume = 273 | issue = 14 | pages = 8063–70 | year = 1998 | pmid = 9525907 | doi = 10.1074/jbc.273.14.8063 }}
+* {{cite journal | vauthors = Pillay TS, Sasaoka T, Olefsky JM | title = Insulin stimulates the tyrosine dephosphorylation of pp125 focal adhesion kinase | journal = J. Biol. Chem. | volume = 270 | issue = 3 | pages = 991–4 | year = 1995 | pmid = 7836419 | doi = 10.1074/jbc.270.3.991 }}
+{{Refend}}
+== External links ==
+*[https://web.archive.org/web/20110722014007/http://cmkb.cellmigration.org/report.cgi?report=orth_overview&orth_acc=co00001687 ARHGAP26] Info with links in the [http://www.cellmigration.org/index.shtml Cell Migration Gateway]
+* {{UCSC gene info|ARHGAP26}}
+{{PDB Gallery|geneid=23092}}
+{{Gene-5-stub}}

ARHGAP26: Difference between revisions

Latest revision as of 15:11, 26 January 2018

Contents

Function

Interactions

References

Further reading

External links

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