HIST1H4I: Difference between revisions

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{{Infobox_gene}}
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'''Histone H4''' is a [[protein]] that, in humans, is encoded by the ''HIST1H4I'' [[gene]].<ref name="pmid8988030">{{cite journal |vauthors=Akasaka T, Miura I, Takahashi N, Akasaka H, Yonetani N, Ohno H, Fukuhara S, Okuma M | title = A recurring translocation, t(3;6)(q27;p21), in non-Hodgkin's lymphoma results in replacement of the 5' regulatory region of BCL6 with a novel H4 histone gene | journal = Cancer Res | volume = 57 | issue = 1 | pages = 7–12 |date=Jan 1997 | pmid = 8988030 | pmc =  | doi }}</ref><ref name="pmid9439656">{{cite journal |vauthors=Albig W, Doenecke D | title = The human histone gene cluster at the D6S105 locus | journal = Hum Genet | volume = 101 | issue = 3 | pages = 284–94 |date=Feb 1998 | pmid = 9439656 | pmc =  | doi =10.1007/s004390050630 }}</ref><ref name="pmid12408966">{{cite journal |vauthors=Marzluff WF, Gongidi P, Woods KR, Jin J, Maltais LJ | title = The human and mouse replication-dependent histone genes | journal = Genomics | volume = 80 | issue = 5 | pages = 487–98 |date=Oct 2002 | pmid = 12408966 | pmc =  | doi =10.1016/S0888-7543(02)96850-3 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: HIST1H4I histone cluster 1, H4i| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=8294| accessdate = }}</ref>
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{{GNF_Protein_box
| image = PBB_Protein_HIST1H4I_image.jpg
| image_source = [[Protein_Data_Bank|PDB]] rendering based on 1aoi.
| PDB = {{PDB2|1aoi}}, {{PDB2|1eqz}}, {{PDB2|1f66}}, {{PDB2|1hio}}, {{PDB2|1hq3}}, {{PDB2|1id3}}, {{PDB2|1kx3}}, {{PDB2|1kx4}}, {{PDB2|1kx5}}, {{PDB2|1m18}}, {{PDB2|1m19}}, {{PDB2|1m1a}}, {{PDB2|1p34}}, {{PDB2|1p3a}}, {{PDB2|1p3b}}, {{PDB2|1p3f}}, {{PDB2|1p3g}}, {{PDB2|1p3i}}, {{PDB2|1p3k}}, {{PDB2|1p3l}}, {{PDB2|1p3m}}, {{PDB2|1p3o}}, {{PDB2|1p3p}}, {{PDB2|1s32}}, {{PDB2|1tzy}}, {{PDB2|1u35}}, {{PDB2|1zbb}}, {{PDB2|1zla}}, {{PDB2|2aro}}, {{PDB2|2cv5}}, {{PDB2|2f8n}}, {{PDB2|2fj7}}, {{PDB2|2hio}}, {{PDB2|2hue}}, {{PDB2|2io5}}, {{PDB2|2nzd}}
| Name = Histone cluster 1, H4i
| HGNCid = 4793
| Symbol = HIST1H4I
| AltSymbols =; H4/m; H4FM; H4M
| OMIM = 602833
| ECnumber =
| Homologene = 88583
  | MGIid = 2448425
  | Function =  
| Component =  
| Process =  
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 8294
    | Hs_Ensembl =
    | Hs_RefseqProtein = NP_003486
    | Hs_RefseqmRNA = NM_003495
    | Hs_GenLoc_db =
    | Hs_GenLoc_chr =   
    | Hs_GenLoc_start =   
    | Hs_GenLoc_end =
    | Hs_Uniprot =
    | Mm_EntrezGene = 319157
    | Mm_Ensembl =
    | Mm_RefseqmRNA = NM_175655
    | Mm_RefseqProtein = NP_783586
    | Mm_GenLoc_db =
    | Mm_GenLoc_chr =
    | Mm_GenLoc_start =
    | Mm_GenLoc_end =   
    | Mm_Uniprot =   
  }}
}}
'''Histone cluster 1, H4i''', also known as '''HIST1H4I''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: HIST1H4I histone cluster 1, H4i| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=8294| accessdate = }}</ref>


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{{PBB_Summary
{{PBB_Summary
| section_title =  
| section_title =  
| summary_text = Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a member of the histone H4 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. This gene is found in the histone microcluster on chromosome 6p21.33.<ref name="entrez">{{cite web | title = Entrez Gene: HIST1H4I histone cluster 1, H4i| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=8294| accessdate = }}</ref>
| summary_text = Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a member of the histone H4 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. This gene is found in the histone microcluster on chromosome 6p21.33.<ref name="entrez" />
}}
}}


==References==
==References==
{{reflist|2}}
{{reflist}}
 
==Further reading==
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading  
{{PBB_Further_reading  
| citations =  
| citations =  
*{{cite journal  | author=Albig W, Kardalinou E, Drabent B, ''et al.'' |title=Isolation and characterization of two human H1 histone genes within clusters of core histone genes. |journal=Genomics |volume=10 |issue= 4 |pages= 940-8 |year= 1991 |pmid= 1916825 |doi=  }}
*{{cite journal  | author=Albig W |title=Isolation and characterization of two human H1 histone genes within clusters of core histone genes |journal=Genomics |volume=10 |issue= 4 |pages= 940–8 |year= 1991 |pmid= 1916825 |doi=10.1016/0888-7543(91)90183-F |name-list-format=vanc| author2=Kardalinou E | author3=Drabent B  | display-authors=| last4=Zimmer  | first4=Andreas  | last5=Doenecke  | first5=Detlef }}
*{{cite journal | author=Turner BM, O'Neill LP, Allan IM |title=Histone H4 acetylation in human cells. Frequency of acetylation at different sites defined by immunolabeling with site-specific antibodies. |journal=FEBS Lett. |volume=253 |issue= 1-2 |pages= 141-5 |year= 1989 |pmid= 2474456 |doi=  }}
*{{cite journal  |vauthors=Turner BM, O'Neill LP, Allan IM |title=Histone H4 acetylation in human cells. Frequency of acetylation at different sites defined by immunolabeling with site-specific antibodies |journal=FEBS Lett. |volume=253 |issue= 1–2 |pages= 141–5 |year= 1989 |pmid= 2474456 |doi=10.1016/0014-5793(89)80947-0 }}
*{{cite journal  | author=Pauli U, Chrysogelos S, Stein G, ''et al.'' |title=Protein-DNA interactions in vivo upstream of a cell cycle-regulated human H4 histone gene. |journal=Science |volume=236 |issue= 4806 |pages= 1308-11 |year= 1987 |pmid= 3035717 |doi=  }}
*{{cite journal  | author=Pauli U |title=Protein-DNA interactions in vivo upstream of a cell cycle-regulated human H4 histone gene |journal=Science |volume=236 |issue= 4806 |pages= 1308–11 |year= 1987 |pmid= 3035717 |doi=10.1126/science.3035717 |name-list-format=vanc| author2=Chrysogelos S  | author3=Stein G  | display-authors=| last4=Stein  | first4=| last5=Nick  | first5=H }}
*{{cite journal  | author=Ebralidse KK, Grachev SA, Mirzabekov AD |title=A highly basic histone H4 domain bound to the sharply bent region of nucleosomal DNA. |journal=Nature |volume=331 |issue= 6154 |pages= 365-7 |year= 1988 |pmid= 3340182 |doi= 10.1038/331365a0 }}
*{{cite journal  |vauthors=Ebralidse KK, Grachev SA, Mirzabekov AD |title=A highly basic histone H4 domain bound to the sharply bent region of nucleosomal DNA |journal=Nature |volume=331 |issue= 6154 |pages= 365–7 |year= 1988 |pmid= 3340182 |doi= 10.1038/331365a0 }}
*{{cite journal | author=Sierra F, Stein G, Stein J |title=Structure and in vitro transcription of a human H4 histone gene. |journal=Nucleic Acids Res. |volume=11 |issue= 20 |pages= 7069-86 |year= 1983 |pmid= 6314274 |doi=  }}
*{{cite journal  |vauthors=Sierra F, Stein G, Stein J |title=Structure and in vitro transcription of a human H4 histone gene |journal=Nucleic Acids Res. |volume=11 |issue= 20 |pages= 7069–86 |year= 1983 |pmid= 6314274 |doi=10.1093/nar/11.20.7069  | pmc=326439  }}
*{{cite journal  | author=Drabent B, Kardalinou E, Bode C, Doenecke D |title=Association of histone H4 genes with the mammalian testis-specific H1t histone gene. |journal=DNA Cell Biol. |volume=14 |issue= 7 |pages= 591-7 |year= 1995 |pmid= 7626218 |doi= }}
*{{cite journal  |vauthors=Drabent B, Kardalinou E, Bode C, Doenecke D |title=Association of histone H4 genes with the mammalian testis-specific H1t histone gene |journal=DNA Cell Biol. |volume=14 |issue= 7 |pages= 591–7 |year= 1995 |pmid= 7626218 |doi=10.1089/dna.1995.14.591 }}
*{{cite journal  | author=Akasaka T, Miura I, Takahashi N, ''et al.'' |title=A recurring translocation, t(3;6)(q27;p21), in non-Hodgkin's lymphoma results in replacement of the 5' regulatory region of BCL6 with a novel H4 histone gene. |journal=Cancer Res. |volume=57 |issue= 1 |pages= 7-12 |year= 1997 |pmid= 8988030 |doi= }}
*{{cite journal  |vauthors=Albig W, Meergans T, Doenecke D |title=Characterization of the H1.5 gene completes the set of human H1 subtype genes |journal=Gene |volume=184 |issue= 2 |pages= 141–8 |year= 1997 |pmid= 9031620 |doi=10.1016/S0378-1119(96)00582-3  }}
*{{cite journal  | author=Albig W, Meergans T, Doenecke D |title=Characterization of the H1.5 gene completes the set of human H1 subtype genes. |journal=Gene |volume=184 |issue= 2 |pages= 141-8 |year= 1997 |pmid= 9031620 |doi=  }}
*{{cite journal  | author=Albig W |title=Human histone gene organization: nonregular arrangement within a large cluster |journal=Genomics |volume=40 |issue= 2 |pages= 314–22 |year= 1997 |pmid= 9119399 |doi= 10.1006/geno.1996.4592 |name-list-format=vanc| author2=Kioschis P | author3=Poustka A | display-authors=| last4=Meergans  | first4=Konstanze  | last5=Doenecke  | first5=Detlef }}
*{{cite journal  | author=Albig W, Kioschis P, Poustka A, ''et al.'' |title=Human histone gene organization: nonregular arrangement within a large cluster. |journal=Genomics |volume=40 |issue= 2 |pages= 314-22 |year= 1997 |pmid= 9119399 |doi= 10.1006/geno.1996.4592 }}
*{{cite journal  |vauthors=El Kharroubi A, Piras G, Zensen R, Martin MA |title=Transcriptional Activation of the Integrated Chromatin-Associated Human Immunodeficiency Virus Type 1 Promoter |journal=Mol. Cell. Biol. |volume=18 |issue= 5 |pages= 2535–44 |year= 1998 |pmid= 9566873 |doi= 10.1128/mcb.18.5.2535| pmc=110633  }}
*{{cite journal  | author=Albig W, Doenecke D |title=The human histone gene cluster at the D6S105 locus. |journal=Hum. Genet. |volume=101 |issue= 3 |pages= 284-94 |year= 1998 |pmid= 9439656 |doi=  }}
*{{cite journal  | author=Albig W |title=The human H2A and H2B histone gene complement |journal=Biol. Chem. |volume=380 |issue= 1 |pages= 7–18 |year= 1999 |pmid= 10064132 |doi=10.1515/BC.1999.002 |name-list-format=vanc| author2=Trappe R  | author3=Kardalinou E | display-authors=3  | last4=Eick  | first4=S. | last5=Doenecke  | first5=D. }}
*{{cite journal | author=El Kharroubi A, Piras G, Zensen R, Martin MA |title=Transcriptional activation of the integrated chromatin-associated human immunodeficiency virus type 1 promoter. |journal=Mol. Cell. Biol. |volume=18 |issue= 5 |pages= 2535-44 |year= 1998 |pmid= 9566873 |doi= }}
*{{cite journal  |vauthors=Ahn J, Gruen JR |title=The genomic organization of the histone clusters on human 6p21.3 |journal=Mamm. Genome |volume=10 |issue= 7 |pages= 768–70 |year= 1999 |pmid= 10384058 |doi=10.1007/s003359901089  }}
*{{cite journal  | author=Albig W, Trappe R, Kardalinou E, ''et al.'' |title=The human H2A and H2B histone gene complement. |journal=Biol. Chem. |volume=380 |issue= 1 |pages= 7-18 |year= 1999 |pmid= 10064132 |doi=  }}
*{{cite journal  | author=Deng L |title=Acetylation of HIV-1 Tat by CBP/P300 increases transcription of integrated HIV-1 genome and enhances binding to core histones |journal=Virology |volume=277 |issue= 2 |pages= 278–95 |year= 2001 |pmid= 11080476 |doi= 10.1006/viro.2000.0593  |name-list-format=vanc| author2=de la Fuente C | author3=Fu P | display-authors=| last4=Wang  | first4=| last5=Donnelly  | first5=| last6=Wade  | first6=JD  | last7=Lambert  | first7=P  | last8=Li  | first8=| last9=Lee | first9=CG }}
*{{cite journal  | author=Ahn J, Gruen JR |title=The genomic organization of the histone clusters on human 6p21.3. |journal=Mamm. Genome |volume=10 |issue= 7 |pages= 768-70 |year= 1999 |pmid= 10384058 |doi=  }}
*{{cite journal  | author=Deng L |title=Enhancement of the p300 HAT activity by HIV-1 Tat on chromatin DNA |journal=Virology |volume=289 |issue= 2 |pages= 312–26 |year= 2001 |pmid= 11689053 |doi= 10.1006/viro.2001.1129 |name-list-format=vanc| author2=Wang D  | author3=de la Fuente C  | display-authors=| last4=Wang  | first4=L  | last5=Li  | first5=| last6=Lee  | first6=CG  | last7=Donnelly  | first7=R  | last8=Wade  | first8=JD  | last9=Lambert  | first9=P }}
*{{cite journal | author=Deng L, de la Fuente C, Fu P, ''et al.'' |title=Acetylation of HIV-1 Tat by CBP/P300 increases transcription of integrated HIV-1 genome and enhances binding to core histones. |journal=Virology |volume=277 |issue= 2 |pages= 278-95 |year= 2001 |pmid= 11080476 |doi= 10.1006/viro.2000.0593 }}
*{{cite journal  | author=Strausberg RL |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 |name-list-format=vanc| author2=Feingold EA  | author3=Grouse LH  | display-authors=3  | last4=Derge  | first4=JG  | last5=Klausner  | first5=RD  | last6=Collins  | first6=FS  | last7=Wagner  | first7=L  | last8=Shenmen  | first8=CM  | last9=Schuler  | first9=GD }}
*{{cite journal  | author=Deng L, Wang D, de la Fuente C, ''et al.'' |title=Enhancement of the p300 HAT activity by HIV-1 Tat on chromatin DNA. |journal=Virology |volume=289 |issue= 2 |pages= 312-26 |year= 2001 |pmid= 11689053 |doi= 10.1006/viro.2001.1129 }}
*{{cite journal  | author=Mungall AJ |title=The DNA sequence and analysis of human chromosome 6 |journal=Nature |volume=425 |issue= 6960 |pages= 805–11 |year= 2003 |pmid= 14574404 |doi= 10.1038/nature02055  |name-list-format=vanc| author2=Palmer SA  | author3=Sims SK  | display-authors=3  | last4=Edwards  | first4=C. A.  | last5=Ashurst  | first5=J. L.  | last6=Wilming  | first6=L.  | last7=Jones  | first7=M. C.  | last8=Horton  | first8=R.  | last9=Hunt  | first9=S. E. }}
*{{cite journal | author=Marzluff WF, Gongidi P, Woods KR, ''et al.'' |title=The human and mouse replication-dependent histone genes. |journal=Genomics |volume=80 |issue= 5 |pages= 487-98 |year= 2003 |pmid= 12408966 |doi=  }}
*{{cite journal  |vauthors=Lusic M, Marcello A, Cereseto A, Giacca M |title=Regulation of HIV-1 gene expression by histone acetylation and factor recruitment at the LTR promoter |journal=EMBO J. |volume=22 |issue= 24 |pages= 6550–61 |year= 2004 |pmid= 14657027 |doi= 10.1093/emboj/cdg631  | pmc=291826 }}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  | author=Bouwmeester T |title=A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway |journal=Nat. Cell Biol. |volume=6 |issue= 2 |pages= 97–105 |year= 2004 |pmid= 14743216 |doi= 10.1038/ncb1086  |name-list-format=vanc| author2=Bauch A  | author3=Ruffner H  | display-authors=3  | last4=Angrand  | first4=Pierre-Olivier  | last5=Bergamini  | first5=Giovanna  | last6=Croughton  | first6=Karen  | last7=Cruciat  | first7=Cristina  | last8=Eberhard  | first8=Dirk  | last9=Gagneur  | first9=Julien }}
*{{cite journal | author=Mungall AJ, Palmer SA, Sims SK, ''et al.'' |title=The DNA sequence and analysis of human chromosome 6. |journal=Nature |volume=425 |issue= 6960 |pages= 805-11 |year= 2003 |pmid= 14574404 |doi= 10.1038/nature02055 }}
*{{cite journal  | author=Lusic M, Marcello A, Cereseto A, Giacca M |title=Regulation of HIV-1 gene expression by histone acetylation and factor recruitment at the LTR promoter. |journal=EMBO J. |volume=22 |issue= 24 |pages= 6550-61 |year= 2004 |pmid= 14657027 |doi= 10.1093/emboj/cdg631 }}
*{{cite journal | author=Bouwmeester T, Bauch A, Ruffner H, ''et al.'' |title=A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway. |journal=Nat. Cell Biol. |volume=6 |issue= 2 |pages= 97-105 |year= 2004 |pmid= 14743216 |doi= 10.1038/ncb1086 }}
}}
}}
{{refend}}
{{refend}}
{{PDB Gallery|geneid=8294}}
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Latest revision as of 13:42, 31 August 2017

VALUE_ERROR (nil)
Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

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Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Histone H4 is a protein that, in humans, is encoded by the HIST1H4I gene.[1][2][3][4]

Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a member of the histone H4 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. This gene is found in the histone microcluster on chromosome 6p21.33.[4]

References

  1. Akasaka T, Miura I, Takahashi N, Akasaka H, Yonetani N, Ohno H, Fukuhara S, Okuma M (Jan 1997). "A recurring translocation, t(3;6)(q27;p21), in non-Hodgkin's lymphoma results in replacement of the 5' regulatory region of BCL6 with a novel H4 histone gene". Cancer Res. 57 (1): 7–12. PMID 8988030.
  2. Albig W, Doenecke D (Feb 1998). "The human histone gene cluster at the D6S105 locus". Hum Genet. 101 (3): 284–94. doi:10.1007/s004390050630. PMID 9439656.
  3. Marzluff WF, Gongidi P, Woods KR, Jin J, Maltais LJ (Oct 2002). "The human and mouse replication-dependent histone genes". Genomics. 80 (5): 487–98. doi:10.1016/S0888-7543(02)96850-3. PMID 12408966.
  4. 4.0 4.1 "Entrez Gene: HIST1H4I histone cluster 1, H4i".

Further reading