KIFAP3: Difference between revisions
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{{ | '''Kinesin-associated protein 3''' is a [[protein]] that in humans is encoded by the ''KIFAP3'' (also known as ''KAP3'') [[gene]].<ref name="pmid8900189">{{cite journal |vauthors=Shimizu K, Kawabe H, Minami S, Honda T, Takaishi K, Shirataki H, Takai Y | title = SMAP, an Smg GDS-associating protein having arm repeats and phosphorylated by Src tyrosine kinase | journal = J Biol Chem | volume = 271 | issue = 43 | pages = 27013–7 |date=Dec 1996 | pmid = 8900189 | pmc = | doi =10.1074/jbc.271.43.27013 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: KIFAP3 kinesin-associated protein 3| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=22920| accessdate = }}</ref> It is a non-motor, accessory subunit which co-oligomerizes with the motor subunits KIF3A and KIF3B or KIF3C, to form heterotrimeric kinesin-2 motor proteins. Kinesin-2 KAP subunits were initially characterized in echinoderms and mice.<ref name="pmid8636215">{{cite journal |vauthors=Wedaman KP, Meyer DW, Rashid DJ, Cole DG, Scholey JM | title = Sequence and submolecular localization of the 115-kD accessory subunit of the heterotrimeric kinesin-II (KRP85/95) complex | journal = J. Cell Biol. | volume = 132 | issue = 3 | pages = 371–80 |date=February 1996 | pmid = 8636215 | pmc = 2120715 | doi = 10.1083/jcb.132.3.371}}</ref><ref name="pmid8710890">{{cite journal |vauthors=Yamazaki H, Nakata T, Okada Y, Hirokawa N | title = Cloning and characterization of KAP3: a novel kinesin superfamily-associated protein of KIF3A/3B | journal = Proc. Natl. Acad. Sci. U.S.A. | volume = 93 | issue = 16 | pages = 8443–8 |date=August 1996 | pmid = 8710890 | pmc = 38690 | doi = 10.1073/pnas.93.16.8443}}</ref> | ||
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== Function == | |||
The small G protein GDP dissociation stimulator ([[RAP1GDS1|smg GDS]]) is a regulator protein having two activities on a group of [[small GTPase|small G protein]]s including the [[Rho family of GTPases|Rho]] and [[Rap1]] family members and Ki-Ras; one is to stimulate their GDP/GTP exchange reactions, and the other is to inhibit their interactions with membranes. The protein encoded by this gene contains 9 [[Armadillo repeats]] and interacts with the smg GDS protein through these repeats. This protein, which is highly concentrated around the [[endoplasmic reticulum]], is [[phosphorylation|phosphorylated]] by {{SWL|target= Src (gene)|label=v-src|type=phosphorylated_by}}, and this phosphorylation reduces the affinity of the protein for smg GDS. It is thought that this protein serves as a linker between human chromosome-associated polypeptide ([[SMC2|HCAP]]) and KIF3A/B, a [[kinesin]] superfamily protein in the nucleus, and that it plays a role in the interaction of chromosomes with an ATPase motor protein.<ref name="entrez" /> | |||
==References== | == Interactions == | ||
{{reflist | |||
==Further reading== | KIFAP3 has been shown to [[Protein-protein interaction|interact]] with {{SWL|target=APC (gene)|label=APC|type=PPI}},<ref name="pmid11912492">{{cite journal |vauthors=Jimbo T, Kawasaki Y, Koyama R, Sato R, Takada S, Haraguchi K, Akiyama T | title = Identification of a link between the tumour suppressor APC and the kinesin superfamily | journal = Nat. Cell Biol. | volume = 4 | issue = 4 | pages = 323–7 |date=April 2002 | pmid = 11912492 | doi = 10.1038/ncb779 | url = }}</ref> {{SWL|target=SMC3 (gene)|type=PPI|label=SMC3}}<ref name="pmid9506951">{{cite journal |vauthors=Shimizu K, Shirataki H, Honda T, Minami S, Takai Y | title = Complex formation of SMAP/KAP3, a KIF3A/B ATPase motor-associated protein, with a human chromosome-associated polypeptide | journal = J. Biol. Chem. | volume = 273 | issue = 12 | pages = 6591–4 |date=March 1998 | pmid = 9506951 | doi = 10.1074/jbc.273.12.6591| url = }}</ref> and {{SWL|target=RAP1GDS1|type=PPI}}.<ref name="pmid8900189" /> | ||
== References == | |||
{{reflist}} | |||
== Further reading == | |||
{{refbegin | 2}} | {{refbegin | 2}} | ||
*{{cite journal | author=Nagata K |title=The MAP kinase kinase kinase MLK2 co-localizes with activated JNK along microtubules and associates with kinesin superfamily motor KIF3 |journal=EMBO J. |volume=17 |issue= 1 |pages= 149–58 |year= 1998 |pmid= 9427749 |doi= 10.1093/emboj/17.1.149 | pmc=1170366 |name-list-format=vanc| author2=Puls A | author3=Futter C | display-authors=3 | last4=Aspenstrom | first4=P | last5=Schaefer | first5=E | last6=Nakata | first6=T | last7=Hirokawa | first7=N | last8=Hall | first8=A }} | |||
*{{cite journal | author=Shimizu K |title=Complex formation of SMAP/KAP3, a KIF3A/B ATPase motor-associated protein, with a human chromosome-associated polypeptide |journal=J. Biol. Chem. |volume=273 |issue= 12 |pages= 6591–4 |year= 1998 |pmid= 9506951 |doi=10.1074/jbc.273.12.6591 |name-list-format=vanc| author2=Shirataki H | author3=Honda T | display-authors=3 | last4=Minami | first4=S | last5=Takai | first5=Y }} | |||
*{{cite journal | author=Strausberg RL |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 |name-list-format=vanc| author2=Feingold EA | author3=Grouse LH | display-authors=3 | last4=Derge | first4=JG | last5=Klausner | first5=RD | last6=Collins | first6=FS | last7=Wagner | first7=L | last8=Shenmen | first8=CM | last9=Schuler | first9=GD }} | |||
*{{cite journal | author=Nagata K | *{{cite journal | author=Ota T |title=Complete sequencing and characterization of 21,243 full-length human cDNAs |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 |name-list-format=vanc| author2=Suzuki Y | author3=Nishikawa T | display-authors=3 | last4=Otsuki | first4=Tetsuji | last5=Sugiyama | first5=Tomoyasu | last6=Irie | first6=Ryotaro | last7=Wakamatsu | first7=Ai | last8=Hayashi | first8=Koji | last9=Sato | first9=Hiroyuki }} | ||
*{{cite journal | author=Shimizu K | *{{cite journal | author=Gerhard DS |title=The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC) |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 |name-list-format=vanc| author2=Wagner L | author3=Feingold EA | display-authors=3 | last4=Shenmen | first4=CM | last5=Grouse | first5=LH | last6=Schuler | first6=G | last7=Klein | first7=SL | last8=Old | first8=S | last9=Rasooly | first9=R }} | ||
*{{cite journal | author=Khanna H |title=RPGR-ORF15, which is mutated in retinitis pigmentosa, associates with SMC1, SMC3, and microtubule transport proteins |journal=J. Biol. Chem. |volume=280 |issue= 39 |pages= 33580–7 |year= 2005 |pmid= 16043481 |doi= 10.1074/jbc.M505827200 | pmc=1249479 |name-list-format=vanc| author2=Hurd TW | author3=Lillo C | display-authors=3 | last4=Shu | first4=X | last5=Parapuram | first5=SK | last6=He | first6=S | last7=Akimoto | first7=M | last8=Wright | first8=AF | last9=Margolis | first9=B }} | |||
*{{cite journal | author=Strausberg RL | *{{cite journal | author=Rual JF |title=Towards a proteome-scale map of the human protein-protein interaction network |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 |name-list-format=vanc| author2=Venkatesan K | author3=Hao T | display-authors=3 | last4=Hirozane-Kishikawa | first4=Tomoko | last5=Dricot | first5=Amélie | last6=Li | first6=Ning | last7=Berriz | first7=Gabriel F. | last8=Gibbons | first8=Francis D. | last9=Dreze | first9=Matija }} | ||
*{{cite journal | author=Ota T | *{{cite journal | author=Brown CL |title=Kinesin-2 is a motor for late endosomes and lysosomes |journal=Traffic |volume=6 |issue= 12 |pages= 1114–24 |year= 2006 |pmid= 16262723 |doi= 10.1111/j.1600-0854.2005.00347.x |name-list-format=vanc| author2=Maier KC | author3=Stauber T | display-authors=3 | last4=Ginkel | first4=Laura M. | last5=Wordeman | first5=Linda | last6=Vernos | first6=Isabelle | last7=Schroer | first7=Trina A. }} | ||
*{{cite journal | author=Gerhard DS | *{{cite journal | author=Haraguchi K |title=Role of the kinesin-2 family protein, KIF3, during mitosis |journal=J. Biol. Chem. |volume=281 |issue= 7 |pages= 4094–9 |year= 2006 |pmid= 16298999 |doi= 10.1074/jbc.M507028200 |name-list-format=vanc| author2=Hayashi T | author3=Jimbo T | display-authors=3 | last4=Yamamoto | first4=T | last5=Akiyama | first5=T }} | ||
*{{cite journal | author=Khanna H | *{{cite journal | author=Gregory SG |title=The DNA sequence and biological annotation of human chromosome 1 |journal=Nature |volume=441 |issue= 7091 |pages= 315–21 |year= 2006 |pmid= 16710414 |doi= 10.1038/nature04727 |name-list-format=vanc| author2=Barlow KF | author3=McLay KE | display-authors=3 | last4=Kaul | first4=R. | last5=Swarbreck | first5=D. | last6=Dunham | first6=A. | last7=Scott | first7=C. E. | last8=Howe | first8=K. L. | last9=Woodfine | first9=K. }} | ||
*{{cite journal | author=Rual JF | *{{cite journal | author=Lim J |title=A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration |journal=Cell |volume=125 |issue= 4 |pages= 801–14 |year= 2006 |pmid= 16713569 |doi= 10.1016/j.cell.2006.03.032 |name-list-format=vanc| author2=Hao T | author3=Shaw C | display-authors=3 | last4=Patel | first4=Akash J. | last5=Szabó | first5=Gábor | last6=Rual | first6=Jean-François | last7=Fisk | first7=C. Joseph | last8=Li | first8=Ning | last9=Smolyar | first9=Alex }} | ||
*{{cite journal | author=Brown CL | *{{cite journal | author=Kuraguchi M |title=Adenomatous Polyposis Coli (APC) Is Required for Normal Development of Skin and Thymus |journal=PLoS Genet. |volume=2 |issue= 9 |pages= e146 |year= 2006 |pmid= 17002498 |doi= 10.1371/journal.pgen.0020146 | pmc=1564426 |name-list-format=vanc| author2=Wang XP | author3=Bronson RT | display-authors=3 | last4=Rothenberg | first4=Rebecca | last5=Ohene-Baah | first5=Nana Yaw | last6=Lund | first6=Jennifer J. | last7=Kucherlapati | first7=Melanie | last8=Maas | first8=Richard L. | last9=Kucherlapati | first9=Raju }} | ||
*{{cite journal | author=Haraguchi K | *{{cite journal |vauthors=Stauber T, Simpson JC, Pepperkok R, Vernos I |title=A role for kinesin-2 in COPI-dependent recycling between the ER and the Golgi complex |journal=Curr. Biol. |volume=16 |issue= 22 |pages= 2245–51 |year= 2007 |pmid= 17113389 |doi= 10.1016/j.cub.2006.09.060 }} | ||
*{{cite journal | author=Gregory SG | |||
*{{cite journal | author=Lim J | |||
*{{cite journal | author=Kuraguchi M | |||
*{{cite journal | | |||
}} | |||
{{refend}} | {{refend}} | ||
{{ | |||
{{gene-1-stub}} | |||
[[Category:Armadillo-repeat-containing proteins]] |
Latest revision as of 06:28, 2 September 2017
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External IDs | GeneCards: [1] | ||||||
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Species | Human | Mouse | |||||
Entrez |
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UniProt |
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RefSeq (mRNA) |
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Location (UCSC) | n/a | n/a | |||||
PubMed search | n/a | n/a | |||||
Wikidata | |||||||
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Kinesin-associated protein 3 is a protein that in humans is encoded by the KIFAP3 (also known as KAP3) gene.[1][2] It is a non-motor, accessory subunit which co-oligomerizes with the motor subunits KIF3A and KIF3B or KIF3C, to form heterotrimeric kinesin-2 motor proteins. Kinesin-2 KAP subunits were initially characterized in echinoderms and mice.[3][4]
Function
The small G protein GDP dissociation stimulator (smg GDS) is a regulator protein having two activities on a group of small G proteins including the Rho and Rap1 family members and Ki-Ras; one is to stimulate their GDP/GTP exchange reactions, and the other is to inhibit their interactions with membranes. The protein encoded by this gene contains 9 Armadillo repeats and interacts with the smg GDS protein through these repeats. This protein, which is highly concentrated around the endoplasmic reticulum, is phosphorylated by v-src , and this phosphorylation reduces the affinity of the protein for smg GDS. It is thought that this protein serves as a linker between human chromosome-associated polypeptide (HCAP) and KIF3A/B, a kinesin superfamily protein in the nucleus, and that it plays a role in the interaction of chromosomes with an ATPase motor protein.[2]
Interactions
KIFAP3 has been shown to interact with APC ,[5] SMC3 [6] and RAP1GDS1 .[1]
References
- ↑ 1.0 1.1 Shimizu K, Kawabe H, Minami S, Honda T, Takaishi K, Shirataki H, Takai Y (Dec 1996). "SMAP, an Smg GDS-associating protein having arm repeats and phosphorylated by Src tyrosine kinase". J Biol Chem. 271 (43): 27013–7. doi:10.1074/jbc.271.43.27013. PMID 8900189.
- ↑ 2.0 2.1 "Entrez Gene: KIFAP3 kinesin-associated protein 3".
- ↑ Wedaman KP, Meyer DW, Rashid DJ, Cole DG, Scholey JM (February 1996). "Sequence and submolecular localization of the 115-kD accessory subunit of the heterotrimeric kinesin-II (KRP85/95) complex". J. Cell Biol. 132 (3): 371–80. doi:10.1083/jcb.132.3.371. PMC 2120715. PMID 8636215.
- ↑ Yamazaki H, Nakata T, Okada Y, Hirokawa N (August 1996). "Cloning and characterization of KAP3: a novel kinesin superfamily-associated protein of KIF3A/3B". Proc. Natl. Acad. Sci. U.S.A. 93 (16): 8443–8. doi:10.1073/pnas.93.16.8443. PMC 38690. PMID 8710890.
- ↑ Jimbo T, Kawasaki Y, Koyama R, Sato R, Takada S, Haraguchi K, Akiyama T (April 2002). "Identification of a link between the tumour suppressor APC and the kinesin superfamily". Nat. Cell Biol. 4 (4): 323–7. doi:10.1038/ncb779. PMID 11912492.
- ↑ Shimizu K, Shirataki H, Honda T, Minami S, Takai Y (March 1998). "Complex formation of SMAP/KAP3, a KIF3A/B ATPase motor-associated protein, with a human chromosome-associated polypeptide". J. Biol. Chem. 273 (12): 6591–4. doi:10.1074/jbc.273.12.6591. PMID 9506951.
Further reading
- Nagata K, Puls A, Futter C, et al. (1998). "The MAP kinase kinase kinase MLK2 co-localizes with activated JNK along microtubules and associates with kinesin superfamily motor KIF3". EMBO J. 17 (1): 149–58. doi:10.1093/emboj/17.1.149. PMC 1170366. PMID 9427749.
- Shimizu K, Shirataki H, Honda T, et al. (1998). "Complex formation of SMAP/KAP3, a KIF3A/B ATPase motor-associated protein, with a human chromosome-associated polypeptide". J. Biol. Chem. 273 (12): 6591–4. doi:10.1074/jbc.273.12.6591. PMID 9506951.
- Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
- Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
- Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
- Khanna H, Hurd TW, Lillo C, et al. (2005). "RPGR-ORF15, which is mutated in retinitis pigmentosa, associates with SMC1, SMC3, and microtubule transport proteins". J. Biol. Chem. 280 (39): 33580–7. doi:10.1074/jbc.M505827200. PMC 1249479. PMID 16043481.
- Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514.
- Brown CL, Maier KC, Stauber T, et al. (2006). "Kinesin-2 is a motor for late endosomes and lysosomes". Traffic. 6 (12): 1114–24. doi:10.1111/j.1600-0854.2005.00347.x. PMID 16262723.
- Haraguchi K, Hayashi T, Jimbo T, et al. (2006). "Role of the kinesin-2 family protein, KIF3, during mitosis". J. Biol. Chem. 281 (7): 4094–9. doi:10.1074/jbc.M507028200. PMID 16298999.
- Gregory SG, Barlow KF, McLay KE, et al. (2006). "The DNA sequence and biological annotation of human chromosome 1". Nature. 441 (7091): 315–21. doi:10.1038/nature04727. PMID 16710414.
- Lim J, Hao T, Shaw C, et al. (2006). "A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration". Cell. 125 (4): 801–14. doi:10.1016/j.cell.2006.03.032. PMID 16713569.
- Kuraguchi M, Wang XP, Bronson RT, et al. (2006). "Adenomatous Polyposis Coli (APC) Is Required for Normal Development of Skin and Thymus". PLoS Genet. 2 (9): e146. doi:10.1371/journal.pgen.0020146. PMC 1564426. PMID 17002498.
- Stauber T, Simpson JC, Pepperkok R, Vernos I (2007). "A role for kinesin-2 in COPI-dependent recycling between the ER and the Golgi complex". Curr. Biol. 16 (22): 2245–51. doi:10.1016/j.cub.2006.09.060. PMID 17113389.
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