KRR1: Difference between revisions

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Latest revision as of 06:37, 2 September 2017

KRR1 small subunit processome component homolog is a protein that in humans is encoded by the KRR1 gene.^[1]^[2]^[3]^[4]^[5]

References

↑ Epplen C, Epplen JT (Feb 1994). "Expression of (cac)n/(gtg)n simple repetitive sequences in mRNA of human lymphocytes". Hum Genet. 93 (1): 35–41. doi:10.1007/BF00218910. PMID 7505766.
↑ Sasaki T, Toh-E A, Kikuchi Y (Oct 2000). "Yeast Krr1p Physically and Functionally Interacts with a Novel Essential Kri1p, and Both Proteins Are Required for 40S Ribosome Biogenesis in the Nucleolus". Mol Cell Biol. 20 (21): 7971–9. doi:10.1128/MCB.20.21.7971-7979.2000. PMC 86407. PMID 11027267.
↑ Chan HY, Brogna S, O'Kane CJ (May 2001). "Dribble, the Drosophila KRR1p Homologue, Is Involved in rRNA Processing". Mol Biol Cell. 12 (5): 1409–19. doi:10.1091/mbc.12.5.1409. PMC 34593. PMID 11359931.
↑ Gromadka R, Kaniak A, Slonimski PP, Rytka J (Aug 1996). "A novel cross-phylum family of proteins comprises a KRR1 (YCL059c) gene which is essential for viability of Saccharomyces cerevisiae cells". Gene. 171 (1): 27–32. doi:10.1016/0378-1119(96)00024-8. PMID 8675026.
↑ "Entrez Gene: KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast)".

Muthumani K, Choo AY, Premkumar A, et al. (2006). "Human immunodeficiency virus type 1 (HIV-1) Vpr-regulated cell death: insights into mechanism". Cell Death Differ. 12 Suppl 1: 962–70. doi:10.1038/sj.cdd.4401583. PMID 15832179.
Andersen JS, Lyon CE, Fox AH, et al. (2002). "Directed proteomic analysis of the human nucleolus". Curr. Biol. 12 (1): 1–11. doi:10.1016/S0960-9822(01)00650-9. PMID 11790298.
Scherl A, Couté Y, Déon C, et al. (2003). "Functional Proteomic Analysis of Human Nucleolus". Mol. Biol. Cell. 13 (11): 4100–9. doi:10.1091/mbc.E02-05-0271. PMC 133617. PMID 12429849.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Micheau O, Tschopp J (2003). "Induction of TNF receptor I-mediated apoptosis via two sequential signaling complexes". Cell. 114 (2): 181–90. doi:10.1016/S0092-8674(03)00521-X. PMID 12887920.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Bernstein KA, Gallagher JE, Mitchell BM, et al. (2005). "The Small-Subunit Processome Is a Ribosome Assembly Intermediate". Eukaryotic Cell. 3 (6): 1619–26. doi:10.1128/EC.3.6.1619-1626.2004. PMC 539036. PMID 15590835.
Andersen JS, Lam YW, Leung AK, et al. (2005). "Nucleolar proteome dynamics". Nature. 433 (7021): 77–83. doi:10.1038/nature03207. PMID 15635413.
Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514.
Oh JH, Yang JO, Hahn Y, et al. (2006). "Transcriptome analysis of human gastric cancer". Mamm. Genome. 16 (12): 942–54. doi:10.1007/s00335-005-0075-2. PMID 16341674.
Olsen JV, Blagoev B, Gnad F, et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983.

This article on a gene on human chromosome 12 is a stub. You can help Wikipedia by expanding it.

[pmid7505766-1] Epplen C, Epplen JT (Feb 1994). "Expression of (cac)n/(gtg)n simple repetitive sequences in mRNA of human lymphocytes". Hum Genet. 93 (1): 35–41. doi:10.1007/BF00218910. PMID 7505766.

[pmid11027267-2] Sasaki T, Toh-E A, Kikuchi Y (Oct 2000). "Yeast Krr1p Physically and Functionally Interacts with a Novel Essential Kri1p, and Both Proteins Are Required for 40S Ribosome Biogenesis in the Nucleolus". Mol Cell Biol. 20 (21): 7971–9. doi:10.1128/MCB.20.21.7971-7979.2000. PMC 86407. PMID 11027267.

[pmid11359931-3] Chan HY, Brogna S, O'Kane CJ (May 2001). "Dribble, the Drosophila KRR1p Homologue, Is Involved in rRNA Processing". Mol Biol Cell. 12 (5): 1409–19. doi:10.1091/mbc.12.5.1409. PMC 34593. PMID 11359931.

[pmid8675026-4] Gromadka R, Kaniak A, Slonimski PP, Rytka J (Aug 1996). "A novel cross-phylum family of proteins comprises a KRR1 (YCL059c) gene which is essential for viability of Saccharomyces cerevisiae cells". Gene. 171 (1): 27–32. doi:10.1016/0378-1119(96)00024-8. PMID 8675026.

[entrez-5] "Entrez Gene: KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast)".

[1]

[2]

[3]

[4]

[5]

@@ Line 1: / Line 1: @@
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+{{Infobox_gene}}
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+'''KRR1 small subunit processome component homolog''' is a [[protein]] that in humans is encoded by the ''KRR1'' [[gene]].<ref name="pmid7505766">{{cite journal |vauthors=Epplen C, Epplen JT | title = Expression of (cac)n/(gtg)n simple repetitive sequences in mRNA of human lymphocytes | journal = Hum Genet | volume = 93 | issue = 1 | pages = 35–41 |date=Feb 1994 | pmid = 7505766 | pmc =  | doi =  10.1007/BF00218910}}</ref><ref name="pmid11027267">{{cite journal |vauthors=Sasaki T, Toh-E A, Kikuchi Y | title = Yeast Krr1p Physically and Functionally Interacts with a Novel Essential Kri1p, and Both Proteins Are Required for 40S Ribosome Biogenesis in the Nucleolus | journal = Mol Cell Biol | volume = 20 | issue = 21 | pages = 7971–9 |date=Oct 2000 | pmid = 11027267 | pmc = 86407 | doi =10.1128/MCB.20.21.7971-7979.2000  }}</ref><ref name="pmid11359931">{{cite journal |vauthors=Chan HY, Brogna S, O'Kane CJ | title = Dribble, the Drosophila KRR1p Homologue, Is Involved in rRNA Processing | journal = Mol Biol Cell | volume = 12 | issue = 5 | pages = 1409–19 |date=May 2001 | pmid = 11359931 | pmc = 34593 | doi =  10.1091/mbc.12.5.1409}}</ref><ref name="pmid8675026">{{cite journal |vauthors=Gromadka R, Kaniak A, Slonimski PP, Rytka J | title = A novel cross-phylum family of proteins comprises a KRR1 (YCL059c) gene which is essential for viability of Saccharomyces cerevisiae cells | journal = Gene | volume = 171 | issue = 1 | pages = 27–32 |date=Aug 1996 | pmid = 8675026 | pmc =  | doi =10.1016/0378-1119(96)00024-8  }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=11103| accessdate = }}</ref>
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-{{GNF_Protein_box
- | image =
- | image_source =
- | PDB =
- | Name = KRR1, small subunit (SSU) processome component, homolog (yeast)
- | HGNCid = 5176
- | Symbol = KRR1
- | AltSymbols =; HRB2; RIP-1
- | OMIM =
- | ECnumber =
- | Homologene = 5114
- | MGIid = 1289274
-  | GeneAtlas_image1 = PBB_GE_KRR1_203202_at_tn.png
-  | GeneAtlas_image2 = PBB_GE_KRR1_203203_s_at_tn.png
- | Function = {{GNF_GO|id=GO:0003676 |text = nucleic acid binding}} {{GNF_GO|id=GO:0005515 |text = protein binding}} {{GNF_GO|id=GO:0030515 |text = snoRNA binding}}
- | Component = {{GNF_GO|id=GO:0005634 |text = nucleus}} {{GNF_GO|id=GO:0005732 |text = small nucleolar ribonucleoprotein complex}}
- | Process = {{GNF_GO|id=GO:0006364 |text = rRNA processing}}
- | Orthologs = {{GNF_Ortholog_box
-    | Hs_EntrezGene = 11103
-    | Hs_Ensembl = ENSG00000111615
-    | Hs_RefseqProtein = NP_008974
-    | Hs_RefseqmRNA = NM_007043
-    | Hs_GenLoc_db =
-    | Hs_GenLoc_chr = 12
-    | Hs_GenLoc_start = 74177688
-    | Hs_GenLoc_end = 74191659
-    | Hs_Uniprot = Q13601
-    | Mm_EntrezGene = 52705
-    | Mm_Ensembl = ENSMUSG00000063334
-    | Mm_RefseqmRNA = NM_178610
-    | Mm_RefseqProtein = NP_848725
-    | Mm_GenLoc_db =
-    | Mm_GenLoc_chr = 10
-    | Mm_GenLoc_start = 111376894
-    | Mm_GenLoc_end = 111391193
-    | Mm_Uniprot = Q52KQ6
-  }}
-}}
-'''KRR1, small subunit (SSU) processome component, homolog (yeast)''', also known as '''KRR1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast)| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=11103| accessdate = }}</ref>
 <!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
@@ Line 56: / Line 9: @@
 ==References==
-{{reflist|2}}
+{{reflist|30em}}
 ==Further reading==
-{{refbegin | 2}}
+{{refbegin|35em}}
 {{PBB_Further_reading
 | citations =
-*{{cite journal  | author=Muthumani K, Choo AY, Premkumar A, ''et al.'' |title=Human immunodeficiency virus type 1 (HIV-1) Vpr-regulated cell death: insights into mechanism. |journal=Cell Death Differ. |volume=12 Suppl 1 |issue=  |pages= 962-70 |year= 2006 |pmid= 15832179 |doi= 10.1038/sj.cdd.4401583 }}
+*{{cite journal   |vauthors=Muthumani K, Choo AY, Premkumar A, etal |title=Human immunodeficiency virus type 1 (HIV-1) Vpr-regulated cell death: insights into mechanism |journal=Cell Death Differ. |volume=12 Suppl 1 |issue=  |pages= 962–70 |year= 2006 |pmid= 15832179 |doi= 10.1038/sj.cdd.4401583 }}
-*{{cite journal  | author=Epplen C, Epplen JT |title=Expression of (cac)n/(gtg)n simple repetitive sequences in mRNA of human lymphocytes. |journal=Hum. Genet. |volume=93 |issue= 1 |pages= 35-41 |year= 1994 |pmid= 7505766 |doi=  }}
+*{{cite journal   |vauthors=Andersen JS, Lyon CE, Fox AH, etal |title=Directed proteomic analysis of the human nucleolus |journal=Curr. Biol. |volume=12 |issue= 1 |pages= 1–11 |year= 2002 |pmid= 11790298 |doi=10.1016/S0960-9822(01)00650-9  }}
-*{{cite journal  | author=Gromadka R, Kaniak A, Slonimski PP, Rytka J |title=A novel cross-phylum family of proteins comprises a KRR1 (YCL059c) gene which is essential for viability of Saccharomyces cerevisiae cells. |journal=Gene |volume=171 |issue= 1 |pages= 27-32 |year= 1996 |pmid= 8675026 |doi=  }}
+*{{cite journal   |vauthors=Scherl A, Couté Y, Déon C, etal |title=Functional Proteomic Analysis of Human Nucleolus |journal=Mol. Biol. Cell |volume=13 |issue= 11 |pages= 4100–9 |year= 2003 |pmid= 12429849 |doi= 10.1091/mbc.E02-05-0271  | pmc=133617 }}
-*{{cite journal  | author=Sasaki T, Toh-E A, Kikuchi Y |title=Yeast Krr1p physically and functionally interacts with a novel essential Kri1p, and both proteins are required for 40S ribosome biogenesis in the nucleolus. |journal=Mol. Cell. Biol. |volume=20 |issue= 21 |pages= 7971-9 |year= 2000 |pmid= 11027267 |doi=  }}
+*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 }}
-*{{cite journal  | author=Chan HY, Brogna S, O'Kane CJ |title=Dribble, the Drosophila KRR1p homologue, is involved in rRNA processing. |journal=Mol. Biol. Cell |volume=12 |issue= 5 |pages= 1409-19 |year= 2001 |pmid= 11359931 |doi=  }}
+*{{cite journal  |vauthors=Micheau O, Tschopp J |title=Induction of TNF receptor I-mediated apoptosis via two sequential signaling complexes |journal=Cell |volume=114 |issue= 2 |pages= 181–90 |year= 2003 |pmid= 12887920 |doi=10.1016/S0092-8674(03)00521-X  }}
-*{{cite journal  | author=Andersen JS, Lyon CE, Fox AH, ''et al.'' |title=Directed proteomic analysis of the human nucleolus. |journal=Curr. Biol. |volume=12 |issue= 1 |pages= 1-11 |year= 2002 |pmid= 11790298 |doi=  }}
+*{{cite journal   |vauthors=Ota T, Suzuki Y, Nishikawa T, etal |title=Complete sequencing and characterization of 21,243 full-length human cDNAs |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
-*{{cite journal  | author=Scherl A, Couté Y, Déon C, ''et al.'' |title=Functional proteomic analysis of human nucleolus. |journal=Mol. Biol. Cell |volume=13 |issue= 11 |pages= 4100-9 |year= 2003 |pmid= 12429849 |doi= 10.1091/mbc.E02-05-0271 }}
+*{{cite journal   |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC) |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504  | pmc=528928 }}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
+*{{cite journal   |vauthors=Bernstein KA, Gallagher JE, Mitchell BM, etal |title=The Small-Subunit Processome Is a Ribosome Assembly Intermediate |journal=Eukaryotic Cell |volume=3 |issue= 6 |pages= 1619–26 |year= 2005 |pmid= 15590835 |doi= 10.1128/EC.3.6.1619-1626.2004  | pmc=539036 }}
-*{{cite journal  | author=Micheau O, Tschopp J |title=Induction of TNF receptor I-mediated apoptosis via two sequential signaling complexes. |journal=Cell |volume=114 |issue= 2 |pages= 181-90 |year= 2003 |pmid= 12887920 |doi=  }}
+*{{cite journal   |vauthors=Andersen JS, Lam YW, Leung AK, etal |title=Nucleolar proteome dynamics |journal=Nature |volume=433 |issue= 7021 |pages= 77–83 |year= 2005 |pmid= 15635413 |doi= 10.1038/nature03207 }}
-*{{cite journal  | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
+*{{cite journal   |vauthors=Rual JF, Venkatesan K, Hao T, etal |title=Towards a proteome-scale map of the human protein-protein interaction network |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
-*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
+*{{cite journal   |vauthors=Oh JH, Yang JO, Hahn Y, etal |title=Transcriptome analysis of human gastric cancer |journal=Mamm. Genome |volume=16 |issue= 12 |pages= 942–54 |year= 2006 |pmid= 16341674 |doi= 10.1007/s00335-005-0075-2 }}
-*{{cite journal  | author=Bernstein KA, Gallagher JE, Mitchell BM, ''et al.'' |title=The small-subunit processome is a ribosome assembly intermediate. |journal=Eukaryotic Cell |volume=3 |issue= 6 |pages= 1619-26 |year= 2005 |pmid= 15590835 |doi= 10.1128/EC.3.6.1619-1626.2004 }}
+*{{cite journal   |vauthors=Olsen JV, Blagoev B, Gnad F, etal |title=Global, in vivo, and site-specific phosphorylation dynamics in signaling networks |journal=Cell |volume=127 |issue= 3 |pages= 635–48 |year= 2006 |pmid= 17081983 |doi= 10.1016/j.cell.2006.09.026 }}
-*{{cite journal  | author=Andersen JS, Lam YW, Leung AK, ''et al.'' |title=Nucleolar proteome dynamics. |journal=Nature |volume=433 |issue= 7021 |pages= 77-83 |year= 2005 |pmid= 15635413 |doi= 10.1038/nature03207 }}
-*{{cite journal  | author=Rual JF, Venkatesan K, Hao T, ''et al.'' |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173-8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
-*{{cite journal  | author=Oh JH, Yang JO, Hahn Y, ''et al.'' |title=Transcriptome analysis of human gastric cancer. |journal=Mamm. Genome |volume=16 |issue= 12 |pages= 942-54 |year= 2006 |pmid= 16341674 |doi= 10.1007/s00335-005-0075-2 }}
-*{{cite journal  | author=Olsen JV, Blagoev B, Gnad F, ''et al.'' |title=Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. |journal=Cell |volume=127 |issue= 3 |pages= 635-48 |year= 2006 |pmid= 17081983 |doi= 10.1016/j.cell.2006.09.026 }}
 }}
 {{refend}}
-{{protein-stub}}
+<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
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+{{PBB_Controls
+| update_page = yes
+| require_manual_inspection = no
+| update_protein_box = yes
+| update_summary = yes
+| update_citations = yes
+}}
+{{gene-12-stub}}

KRR1: Difference between revisions

Latest revision as of 06:37, 2 September 2017

References

Further reading

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