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{{ | '''Protein SSXT''' is a [[protein]] that in humans is encoded by the ''SS18'' [[gene]].<ref name="pmid8152806">{{cite journal | vauthors = Shipley JM, Clark J, Crew AJ, Birdsall S, Rocques PJ, Gill S, Chelly J, Monaco AP, Abe S, Gusterson BA | title = The t(X;18)(p11.2;q11.2) translocation found in human synovial sarcomas involves two distinct loci on the X chromosome | journal = Oncogene | volume = 9 | issue = 5 | pages = 1447–53 | date = May 1994 | pmid = 8152806 | doi = }}</ref><ref name="pmid7951320">{{cite journal | vauthors = Clark J, Rocques PJ, Crew AJ, Gill S, Shipley J, Chan AM, Gusterson BA, Cooper CS | title = Identification of novel genes, SYT and SSX, involved in the t(X;18)(p11.2;q11.2) translocation found in human synovial sarcoma | journal = Nature Genetics | volume = 7 | issue = 4 | pages = 502–8 | date = Aug 1994 | pmid = 7951320 | pmc = | doi = 10.1038/ng0894-502 }}</ref><ref name="pmid16484776">{{cite journal | vauthors = de Bruijn DR, Geurts van Kessel A | title = Common origin of the human synovial sarcoma associated SS18 and SS18L1 gene loci | journal = Cytogenetic and Genome Research | volume = 112 | issue = 3-4 | pages = 222–6 | year = 2006 | pmid = 16484776 | doi = 10.1159/000089874 }}</ref> | ||
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== Function == | |||
SS18 is a member of the human [[SWI/SNF]] chromatin remodeling complex.<ref name="pmid22442726">{{cite journal | vauthors = Middeljans E, Wan X, Jansen PW, Sharma V, Stunnenberg HG, Logie C | title = SS18 together with animal-specific factors defines human BAF-type SWI/SNF complexes | journal = PLOS ONE | volume = 7 | issue = 3 | pages = e33834 | year = 2012 | pmid = 22442726 | pmc = 3307773 | doi = 10.1371/journal.pone.0033834 }}</ref><ref name=pmid11734557 /><ref name=pmid14603256 /> | |||
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== | == Clinical significance == | ||
{{protein- | SS18 is involved in a [[chromosomal translocation]] commonly found in [[synovial sarcoma]].<ref name="pmid12037676">{{cite journal | vauthors = Yang K, Lui WO, Xie Y, Zhang A, Skytting B, Mandahl N, Larsson C, Larsson O | title = Co-existence of SYT-SSX1 and SYT-SSX2 fusions in synovial sarcomas | journal = Oncogene | volume = 21 | issue = 26 | pages = 4181–90 | date = Jun 2002 | pmid = 12037676 | doi = 10.1038/sj.onc.1205569 }}</ref> | ||
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== Interactions == | |||
SS18 has been shown to [[Protein-protein interaction|interact]] with: | |||
{{div col|colwidth=20em}} | |||
* [[EP300]],<ref name = pmid11030627>{{cite journal | vauthors = Eid JE, Kung AL, Scully R, Livingston DM | title = p300 interacts with the nuclear proto-oncoprotein SYT as part of the active control of cell adhesion | journal = Cell | volume = 102 | issue = 6 | pages = 839–48 | date = Sep 2000 | pmid = 11030627 | doi = 10.1016/S0092-8674(00)00072-6 }}</ref> | |||
* [[MLLT10]],<ref name = pmid11423977>{{cite journal | vauthors = de Bruijn DR, dos Santos NR, Thijssen J, Balemans M, Debernardi S, Linder B, Young BD, Geurts van Kessel A | title = The synovial sarcoma associated protein SYT interacts with the acute leukemia associated protein AF10 | journal = Oncogene | volume = 20 | issue = 25 | pages = 3281–9 | date = May 2001 | pmid = 11423977 | doi = 10.1038/sj.onc.1204419 }}</ref> | |||
* [[SMARCA2]],<ref name = pmid14603256>{{cite journal | vauthors = Perani M, Ingram CJ, Cooper CS, Garrett MD, Goodwin GH | title = Conserved SNH domain of the proto-oncoprotein SYT interacts with components of the human chromatin remodelling complexes, while the QPGY repeat domain forms homo-oligomers | journal = Oncogene | volume = 22 | issue = 50 | pages = 8156–67 | date = Nov 2003 | pmid = 14603256 | doi = 10.1038/sj.onc.1207031 }}</ref> and | |||
* [[SMARCB1]].<ref name = pmid11734557>{{cite journal | vauthors = Kato H, Tjernberg A, Zhang W, Krutchinsky AN, An W, Takeuchi T, Ohtsuki Y, Sugano S, de Bruijn DR, Chait BT, Roeder RG | title = SYT associates with human SNF/SWI complexes and the C-terminal region of its fusion partner SSX1 targets histones | journal = The Journal of Biological Chemistry | volume = 277 | issue = 7 | pages = 5498–505 | date = Feb 2002 | pmid = 11734557 | doi = 10.1074/jbc.M108702200 }}</ref> | |||
{{Div col end}} | |||
== References == | |||
{{Reflist}} | |||
== Further reading == | |||
{{Refbegin | 2}} | |||
* {{cite journal | vauthors = Fligman I, Lonardo F, Jhanwar SC, Gerald WL, Woodruff J, Ladanyi M | title = Molecular diagnosis of synovial sarcoma and characterization of a variant SYT-SSX2 fusion transcript | journal = The American Journal of Pathology | volume = 147 | issue = 6 | pages = 1592–9 | date = Dec 1995 | pmid = 7495284 | pmc = 1869933 | doi = }} | |||
* {{cite journal | vauthors = Brett D, Whitehouse S, Antonson P, Shipley J, Cooper C, Goodwin G | title = The SYT protein involved in the t(X;18) synovial sarcoma translocation is a transcriptional activator localised in nuclear bodies | journal = Human Molecular Genetics | volume = 6 | issue = 9 | pages = 1559–64 | date = Sep 1997 | pmid = 9285794 | doi = 10.1093/hmg/6.9.1559 }} | |||
* {{cite journal | vauthors = Thaete C, Brett D, Monaghan P, Whitehouse S, Rennie G, Rayner E, Cooper CS, Goodwin G | title = Functional domains of the SYT and SYT-SSX synovial sarcoma translocation proteins and co-localization with the SNF protein BRM in the nucleus | journal = Human Molecular Genetics | volume = 8 | issue = 4 | pages = 585–91 | date = Apr 1999 | pmid = 10072425 | doi = 10.1093/hmg/8.4.585 }} | |||
* {{cite journal | vauthors = Eid JE, Kung AL, Scully R, Livingston DM | title = p300 interacts with the nuclear proto-oncoprotein SYT as part of the active control of cell adhesion | journal = Cell | volume = 102 | issue = 6 | pages = 839–48 | date = Sep 2000 | pmid = 11030627 | doi = 10.1016/S0092-8674(00)00072-6 }} | |||
* {{cite journal | vauthors = Tamborini E, Agus V, Mezzelani A, Riva C, Sozzi G, Azzarelli A, Pierotti MA, Pilotti S | title = Identification of a novel spliced variant of the SYT gene expressed in normal tissues and in synovial sarcoma | journal = British Journal of Cancer | volume = 84 | issue = 8 | pages = 1087–94 | date = Apr 2001 | pmid = 11308259 | pmc = 2363857 | doi = 10.1054/bjoc.2000.1710 }} | |||
* {{cite journal | vauthors = Brodin B, Haslam K, Yang K, Bartolazzi A, Xie Y, Starborg M, Lundeberg J, Larsson O | title = Cloning and characterization of spliced fusion transcript variants of synovial sarcoma: SYT/SSX4, SYT/SSX4v, and SYT/SSX2v. Possible regulatory role of the fusion gene product in wild type SYT expression | journal = Gene | volume = 268 | issue = 1-2 | pages = 173–82 | date = May 2001 | pmid = 11368913 | doi = 10.1016/S0378-1119(01)00412-7 }} | |||
* {{cite journal | vauthors = de Bruijn DR, dos Santos NR, Thijssen J, Balemans M, Debernardi S, Linder B, Young BD, Geurts van Kessel A | title = The synovial sarcoma associated protein SYT interacts with the acute leukemia associated protein AF10 | journal = Oncogene | volume = 20 | issue = 25 | pages = 3281–9 | date = May 2001 | pmid = 11423977 | doi = 10.1038/sj.onc.1204419 }} | |||
* {{cite journal | vauthors = Suzuki H, Fukunishi Y, Kagawa I, Saito R, Oda H, Endo T, Kondo S, Bono H, Okazaki Y, Hayashizaki Y | title = Protein-protein interaction panel using mouse full-length cDNAs | journal = Genome Research | volume = 11 | issue = 10 | pages = 1758–65 | date = Oct 2001 | pmid = 11591653 | pmc = 311163 | doi = 10.1101/gr.180101 | url = http://eprints.lib.hokudai.ac.jp/dspace/bitstream/2115/50027/1/2_1758.full.pdf }} | |||
* {{cite journal | vauthors = Kato H, Tjernberg A, Zhang W, Krutchinsky AN, An W, Takeuchi T, Ohtsuki Y, Sugano S, de Bruijn DR, Chait BT, Roeder RG | title = SYT associates with human SNF/SWI complexes and the C-terminal region of its fusion partner SSX1 targets histones | journal = The Journal of Biological Chemistry | volume = 277 | issue = 7 | pages = 5498–505 | date = Feb 2002 | pmid = 11734557 | doi = 10.1074/jbc.M108702200 }} | |||
* {{cite journal | vauthors = Yang K, Lui WO, Xie Y, Zhang A, Skytting B, Mandahl N, Larsson C, Larsson O | title = Co-existence of SYT-SSX1 and SYT-SSX2 fusions in synovial sarcomas | journal = Oncogene | volume = 21 | issue = 26 | pages = 4181–90 | date = Jun 2002 | pmid = 12037676 | doi = 10.1038/sj.onc.1205569 }} | |||
* {{cite journal | vauthors = Imabayashi H, Mori T, Gojo S, Kiyono T, Sugiyama T, Irie R, Isogai T, Hata J, Toyama Y, Umezawa A | title = Redifferentiation of dedifferentiated chondrocytes and chondrogenesis of human bone marrow stromal cells via chondrosphere formation with expression profiling by large-scale cDNA analysis | journal = Experimental Cell Research | volume = 288 | issue = 1 | pages = 35–50 | date = Aug 2003 | pmid = 12878157 | doi = 10.1016/S0014-4827(03)00130-7 }} | |||
* {{cite journal | vauthors = Perani M, Ingram CJ, Cooper CS, Garrett MD, Goodwin GH | title = Conserved SNH domain of the proto-oncoprotein SYT interacts with components of the human chromatin remodelling complexes, while the QPGY repeat domain forms homo-oligomers | journal = Oncogene | volume = 22 | issue = 50 | pages = 8156–67 | date = Nov 2003 | pmid = 14603256 | doi = 10.1038/sj.onc.1207031 }} | |||
* {{cite journal | vauthors = Iwasaki T, Koibuchi N, Chin WW | title = Synovial sarcoma translocation (SYT) encodes a nuclear receptor coactivator | journal = Endocrinology | volume = 146 | issue = 9 | pages = 3892–9 | date = Sep 2005 | pmid = 15919756 | doi = 10.1210/en.2004-1513 }} | |||
* {{cite journal | vauthors = Fernebro J, Francis P, Edén P, Borg A, Panagopoulos I, Mertens F, Vallon-Christersson J, Akerman M, Rydholm A, Bauer HC, Mandahl N, Nilbert M | title = Gene expression profiles relate to SS18/SSX fusion type in synovial sarcoma | journal = International Journal of Cancer | volume = 118 | issue = 5 | pages = 1165–72 | date = Mar 2006 | pmid = 16152617 | doi = 10.1002/ijc.21475 }} | |||
* {{cite journal | vauthors = Perani M, Antonson P, Hamoudi R, Ingram CJ, Cooper CS, Garrett MD, Goodwin GH | title = The proto-oncoprotein SYT interacts with SYT-interacting protein/co-activator activator (SIP/CoAA), a human nuclear receptor co-activator with similarity to EWS and TLS/FUS family of proteins | journal = The Journal of Biological Chemistry | volume = 280 | issue = 52 | pages = 42863–76 | date = Dec 2005 | pmid = 16227627 | doi = 10.1074/jbc.M502963200 }} | |||
* {{cite journal | vauthors = Sun Y, Gao D, Liu Y, Huang J, Lessnick S, Tanaka S | title = IGF2 is critical for tumorigenesis by synovial sarcoma oncoprotein SYT-SSX1 | journal = Oncogene | volume = 25 | issue = 7 | pages = 1042–52 | date = Feb 2006 | pmid = 16247461 | doi = 10.1038/sj.onc.1209143 }} | |||
{{Refend}} |
Latest revision as of 09:03, 9 January 2019
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External IDs | GeneCards: [1] | ||||||
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Species | Human | Mouse | |||||
Entrez |
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Ensembl |
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UniProt |
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RefSeq (mRNA) |
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RefSeq (protein) |
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Location (UCSC) | n/a | n/a | |||||
PubMed search | n/a | n/a | |||||
Wikidata | |||||||
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Protein SSXT is a protein that in humans is encoded by the SS18 gene.[1][2][3]
Function
SS18 is a member of the human SWI/SNF chromatin remodeling complex.[4][5][6]
Clinical significance
SS18 is involved in a chromosomal translocation commonly found in synovial sarcoma.[7]
Interactions
SS18 has been shown to interact with:
References
- ↑ Shipley JM, Clark J, Crew AJ, Birdsall S, Rocques PJ, Gill S, Chelly J, Monaco AP, Abe S, Gusterson BA (May 1994). "The t(X;18)(p11.2;q11.2) translocation found in human synovial sarcomas involves two distinct loci on the X chromosome". Oncogene. 9 (5): 1447–53. PMID 8152806.
- ↑ Clark J, Rocques PJ, Crew AJ, Gill S, Shipley J, Chan AM, Gusterson BA, Cooper CS (Aug 1994). "Identification of novel genes, SYT and SSX, involved in the t(X;18)(p11.2;q11.2) translocation found in human synovial sarcoma". Nature Genetics. 7 (4): 502–8. doi:10.1038/ng0894-502. PMID 7951320.
- ↑ de Bruijn DR, Geurts van Kessel A (2006). "Common origin of the human synovial sarcoma associated SS18 and SS18L1 gene loci". Cytogenetic and Genome Research. 112 (3–4): 222–6. doi:10.1159/000089874. PMID 16484776.
- ↑ Middeljans E, Wan X, Jansen PW, Sharma V, Stunnenberg HG, Logie C (2012). "SS18 together with animal-specific factors defines human BAF-type SWI/SNF complexes". PLOS ONE. 7 (3): e33834. doi:10.1371/journal.pone.0033834. PMC 3307773. PMID 22442726.
- ↑ 5.0 5.1 Kato H, Tjernberg A, Zhang W, Krutchinsky AN, An W, Takeuchi T, Ohtsuki Y, Sugano S, de Bruijn DR, Chait BT, Roeder RG (Feb 2002). "SYT associates with human SNF/SWI complexes and the C-terminal region of its fusion partner SSX1 targets histones". The Journal of Biological Chemistry. 277 (7): 5498–505. doi:10.1074/jbc.M108702200. PMID 11734557.
- ↑ 6.0 6.1 Perani M, Ingram CJ, Cooper CS, Garrett MD, Goodwin GH (Nov 2003). "Conserved SNH domain of the proto-oncoprotein SYT interacts with components of the human chromatin remodelling complexes, while the QPGY repeat domain forms homo-oligomers". Oncogene. 22 (50): 8156–67. doi:10.1038/sj.onc.1207031. PMID 14603256.
- ↑ Yang K, Lui WO, Xie Y, Zhang A, Skytting B, Mandahl N, Larsson C, Larsson O (Jun 2002). "Co-existence of SYT-SSX1 and SYT-SSX2 fusions in synovial sarcomas". Oncogene. 21 (26): 4181–90. doi:10.1038/sj.onc.1205569. PMID 12037676.
- ↑ Eid JE, Kung AL, Scully R, Livingston DM (Sep 2000). "p300 interacts with the nuclear proto-oncoprotein SYT as part of the active control of cell adhesion". Cell. 102 (6): 839–48. doi:10.1016/S0092-8674(00)00072-6. PMID 11030627.
- ↑ de Bruijn DR, dos Santos NR, Thijssen J, Balemans M, Debernardi S, Linder B, Young BD, Geurts van Kessel A (May 2001). "The synovial sarcoma associated protein SYT interacts with the acute leukemia associated protein AF10". Oncogene. 20 (25): 3281–9. doi:10.1038/sj.onc.1204419. PMID 11423977.
Further reading
- Fligman I, Lonardo F, Jhanwar SC, Gerald WL, Woodruff J, Ladanyi M (Dec 1995). "Molecular diagnosis of synovial sarcoma and characterization of a variant SYT-SSX2 fusion transcript". The American Journal of Pathology. 147 (6): 1592–9. PMC 1869933. PMID 7495284.
- Brett D, Whitehouse S, Antonson P, Shipley J, Cooper C, Goodwin G (Sep 1997). "The SYT protein involved in the t(X;18) synovial sarcoma translocation is a transcriptional activator localised in nuclear bodies". Human Molecular Genetics. 6 (9): 1559–64. doi:10.1093/hmg/6.9.1559. PMID 9285794.
- Thaete C, Brett D, Monaghan P, Whitehouse S, Rennie G, Rayner E, Cooper CS, Goodwin G (Apr 1999). "Functional domains of the SYT and SYT-SSX synovial sarcoma translocation proteins and co-localization with the SNF protein BRM in the nucleus". Human Molecular Genetics. 8 (4): 585–91. doi:10.1093/hmg/8.4.585. PMID 10072425.
- Eid JE, Kung AL, Scully R, Livingston DM (Sep 2000). "p300 interacts with the nuclear proto-oncoprotein SYT as part of the active control of cell adhesion". Cell. 102 (6): 839–48. doi:10.1016/S0092-8674(00)00072-6. PMID 11030627.
- Tamborini E, Agus V, Mezzelani A, Riva C, Sozzi G, Azzarelli A, Pierotti MA, Pilotti S (Apr 2001). "Identification of a novel spliced variant of the SYT gene expressed in normal tissues and in synovial sarcoma". British Journal of Cancer. 84 (8): 1087–94. doi:10.1054/bjoc.2000.1710. PMC 2363857. PMID 11308259.
- Brodin B, Haslam K, Yang K, Bartolazzi A, Xie Y, Starborg M, Lundeberg J, Larsson O (May 2001). "Cloning and characterization of spliced fusion transcript variants of synovial sarcoma: SYT/SSX4, SYT/SSX4v, and SYT/SSX2v. Possible regulatory role of the fusion gene product in wild type SYT expression". Gene. 268 (1–2): 173–82. doi:10.1016/S0378-1119(01)00412-7. PMID 11368913.
- de Bruijn DR, dos Santos NR, Thijssen J, Balemans M, Debernardi S, Linder B, Young BD, Geurts van Kessel A (May 2001). "The synovial sarcoma associated protein SYT interacts with the acute leukemia associated protein AF10". Oncogene. 20 (25): 3281–9. doi:10.1038/sj.onc.1204419. PMID 11423977.
- Suzuki H, Fukunishi Y, Kagawa I, Saito R, Oda H, Endo T, Kondo S, Bono H, Okazaki Y, Hayashizaki Y (Oct 2001). "Protein-protein interaction panel using mouse full-length cDNAs" (PDF). Genome Research. 11 (10): 1758–65. doi:10.1101/gr.180101. PMC 311163. PMID 11591653.
- Kato H, Tjernberg A, Zhang W, Krutchinsky AN, An W, Takeuchi T, Ohtsuki Y, Sugano S, de Bruijn DR, Chait BT, Roeder RG (Feb 2002). "SYT associates with human SNF/SWI complexes and the C-terminal region of its fusion partner SSX1 targets histones". The Journal of Biological Chemistry. 277 (7): 5498–505. doi:10.1074/jbc.M108702200. PMID 11734557.
- Yang K, Lui WO, Xie Y, Zhang A, Skytting B, Mandahl N, Larsson C, Larsson O (Jun 2002). "Co-existence of SYT-SSX1 and SYT-SSX2 fusions in synovial sarcomas". Oncogene. 21 (26): 4181–90. doi:10.1038/sj.onc.1205569. PMID 12037676.
- Imabayashi H, Mori T, Gojo S, Kiyono T, Sugiyama T, Irie R, Isogai T, Hata J, Toyama Y, Umezawa A (Aug 2003). "Redifferentiation of dedifferentiated chondrocytes and chondrogenesis of human bone marrow stromal cells via chondrosphere formation with expression profiling by large-scale cDNA analysis". Experimental Cell Research. 288 (1): 35–50. doi:10.1016/S0014-4827(03)00130-7. PMID 12878157.
- Perani M, Ingram CJ, Cooper CS, Garrett MD, Goodwin GH (Nov 2003). "Conserved SNH domain of the proto-oncoprotein SYT interacts with components of the human chromatin remodelling complexes, while the QPGY repeat domain forms homo-oligomers". Oncogene. 22 (50): 8156–67. doi:10.1038/sj.onc.1207031. PMID 14603256.
- Iwasaki T, Koibuchi N, Chin WW (Sep 2005). "Synovial sarcoma translocation (SYT) encodes a nuclear receptor coactivator". Endocrinology. 146 (9): 3892–9. doi:10.1210/en.2004-1513. PMID 15919756.
- Fernebro J, Francis P, Edén P, Borg A, Panagopoulos I, Mertens F, Vallon-Christersson J, Akerman M, Rydholm A, Bauer HC, Mandahl N, Nilbert M (Mar 2006). "Gene expression profiles relate to SS18/SSX fusion type in synovial sarcoma". International Journal of Cancer. 118 (5): 1165–72. doi:10.1002/ijc.21475. PMID 16152617.
- Perani M, Antonson P, Hamoudi R, Ingram CJ, Cooper CS, Garrett MD, Goodwin GH (Dec 2005). "The proto-oncoprotein SYT interacts with SYT-interacting protein/co-activator activator (SIP/CoAA), a human nuclear receptor co-activator with similarity to EWS and TLS/FUS family of proteins". The Journal of Biological Chemistry. 280 (52): 42863–76. doi:10.1074/jbc.M502963200. PMID 16227627.
- Sun Y, Gao D, Liu Y, Huang J, Lessnick S, Tanaka S (Feb 2006). "IGF2 is critical for tumorigenesis by synovial sarcoma oncoprotein SYT-SSX1". Oncogene. 25 (7): 1042–52. doi:10.1038/sj.onc.1209143. PMID 16247461.