SSBP1: Difference between revisions

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Latest revision as of 07:05, 11 September 2017

Single-stranded DNA-binding protein, mitochondrial is a protein that in humans is encoded by the SSBP1 gene.^[1]^[2]

Function

SSBP 1 is a housekeeping gene involved in mitochondrial biogenesis (Tiranti et al., 1995).[supplied by OMIM]^[2]

References

↑ Tiranti V, Rossi E, Ruiz-Carrillo A, Rossi G, Rocchi M, DiDonato S, Zuffardi O, Zeviani M (January 1995). "Chromosomal localization of mitochondrial transcription factor A (TCF6), single-stranded DNA-binding protein (SSBP), and endonuclease G (ENDOG), three human housekeeping genes involved in mitochondrial biogenesis". Genomics. 25 (2): 559–64. doi:10.1016/0888-7543(95)80058-T. PMID 7789991.
↑ ^2.0 ^2.1 "Entrez Gene: SSBP1 single-stranded DNA binding protein 1".

Tiranti V, Rocchi M, DiDonato S, Zeviani M (April 1993). "Cloning of human and rat cDNAs encoding the mitochondrial single-stranded DNA-binding protein (SSB)". Gene. 126 (2): 219–25. doi:10.1016/0378-1119(93)90370-I. PMID 8482537.
Yang C, Curth U, Urbanke C, Kang C (February 1997). "Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4 A resolution". Nature Structural Biology. 4 (2): 153–7. doi:10.1038/nsb0297-153. PMID 9033597.
Schultz RA, Swoap SJ, McDaniel LD, Zhang B, Koon EC, Garry DJ, Li K, Williams RS (February 1998). "Differential expression of mitochondrial DNA replication factors in mammalian tissues". The Journal of Biological Chemistry. 273 (6): 3447–51. doi:10.1074/jbc.273.6.3447. PMID 9452467.
Spelbrink JN, Toivonen JM, Hakkaart GA, Kurkela JM, Cooper HM, Lehtinen SK, Lecrenier N, Back JW, Speijer D, Foury F, Jacobs HT (August 2000). "In vivo functional analysis of the human mitochondrial DNA polymerase POLG expressed in cultured human cells". The Journal of Biological Chemistry. 275 (32): 24818–28. doi:10.1074/jbc.M000559200. PMID 10827171.
Müller-Höcker J, Schäfer S, Li K (September 2001). "Immunocytochemical localization of mitochondrial single-stranded DNA-binding protein in mitochondria-rich cells of normal and neoplastic human tissue". Applied Immunohistochemistry & Molecular Morphology. 9 (3): 276–80. doi:10.1097/00022744-200109000-00013. PMID 11556757.
Takamatsu C, Umeda S, Ohsato T, Ohno T, Abe Y, Fukuoh A, Shinagawa H, Hamasaki N, Kang D (May 2002). "Regulation of mitochondrial D-loops by transcription factor A and single-stranded DNA-binding protein". EMBO Reports. 3 (5): 451–6. doi:10.1093/embo-reports/kvf099. PMC 1084112. PMID 11964388.
Chen L, Segal D, Hukriede NA, Podtelejnikov AV, Bayarsaihan D, Kennison JA, Ogryzko VV, Dawid IB, Westphal H (October 2002). "Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development". Proceedings of the National Academy of Sciences of the United States of America. 99 (22): 14320–5. doi:10.1073/pnas.212532399. PMC 137882. PMID 12381786.
Diez-Tascón C, Dodds KG, Crawford AM (December 2002). "Linkage mapping of the ovine single-stranded DNA-binding protein 1 (SSBP1) using microsatellite marker OARCDT7". Animal Genetics. 33 (6): 468. doi:10.1046/j.1365-2052.2002.00938_1.x. PMID 12464025.
Bayarsaihan D (September 2002). "SSDP1 gene encodes a protein with a conserved N-terminal FORWARD domain". Biochimica et Biophysica Acta. 1599 (1–2): 152–5. doi:10.1016/s1570-9639(02)00376-x. PMID 12479417.
Pocernich CB, Poon HF, Boyd-Kimball D, Lynn BC, Nath A, Klein JB, Butterfield DA (February 2005). "Proteomic analysis of oxidatively modified proteins induced by the mitochondrial toxin 3-nitropropionic acid in human astrocytes expressing the HIV protein tat". Brain Research. Molecular Brain Research. 133 (2): 299–306. doi:10.1016/j.molbrainres.2004.10.024. PMID 15710247.

This article on a gene on human chromosome 7 is a stub. You can help Wikipedia by expanding it.

[pmid7789991-1] Tiranti V, Rossi E, Ruiz-Carrillo A, Rossi G, Rocchi M, DiDonato S, Zuffardi O, Zeviani M (January 1995). "Chromosomal localization of mitochondrial transcription factor A (TCF6), single-stranded DNA-binding protein (SSBP), and endonuclease G (ENDOG), three human housekeeping genes involved in mitochondrial biogenesis". Genomics. 25 (2): 559–64. doi:10.1016/0888-7543(95)80058-T. PMID 7789991.

[entrez-2] 2.0 ^2.1 "Entrez Gene: SSBP1 single-stranded DNA binding protein 1".

[1]

[2]

@@ Line 1: / Line 1: @@
-<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
+{{Infobox_gene}}
-{{PBB_Controls
+'''Single-stranded DNA-binding protein, mitochondrial''' is a [[protein]] that in humans is encoded by the ''SSBP1'' [[gene]].<ref name="pmid7789991">{{cite journal | vauthors = Tiranti V, Rossi E, Ruiz-Carrillo A, Rossi G, Rocchi M, DiDonato S, Zuffardi O, Zeviani M | title = Chromosomal localization of mitochondrial transcription factor A (TCF6), single-stranded DNA-binding protein (SSBP), and endonuclease G (ENDOG), three human housekeeping genes involved in mitochondrial biogenesis | journal = Genomics | volume = 25 | issue = 2 | pages = 559–64 | date = January 1995 | pmid = 7789991 | pmc =  | doi = 10.1016/0888-7543(95)80058-T }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: SSBP1 single-stranded DNA binding protein 1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=6742| accessdate = }}</ref>
-| update_page = yes
-| require_manual_inspection = no
-| update_protein_box = yes
-| update_summary = yes
-| update_citations = yes
-}}
-<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
+== Function ==
-{{GNF_Protein_box
- | image = PBB_Protein_SSBP1_image.jpg
- | image_source = [[Protein_Data_Bank|PDB]] rendering based on 1s3o.
- | PDB = {{PDB2|1s3o}}, {{PDB2|2dud}}, {{PDB2|3ull}}
- | Name = Single-stranded DNA binding protein 1
- | HGNCid = 11317
- | Symbol = SSBP1
- | AltSymbols =; SSBP
- | OMIM = 600439
- | ECnumber =
- | Homologene = 74462
- | MGIid = 1920040
- | GeneAtlas_image1 = PBB_GE_SSBP1_202591_s_at_tn.png
- | Function = {{GNF_GO|id=GO:0003677 |text = DNA binding}} {{GNF_GO|id=GO:0003697 |text = single-stranded DNA binding}}
- | Component = {{GNF_GO|id=GO:0005739 |text = mitochondrion}}
- | Process = {{GNF_GO|id=GO:0006260 |text = DNA replication}}
- | Orthologs = {{GNF_Ortholog_box
-    | Hs_EntrezGene = 6742
-    | Hs_Ensembl = ENSG00000106028
-    | Hs_RefseqProtein = NP_003134
-    | Hs_RefseqmRNA = NM_003143
-    | Hs_GenLoc_db =
-    | Hs_GenLoc_chr = 7
-    | Hs_GenLoc_start = 141084628
-    | Hs_GenLoc_end = 141096725
-    | Hs_Uniprot = Q04837
-    | Mm_EntrezGene = 381760
-    | Mm_Ensembl = ENSMUSG00000029911
-    | Mm_RefseqmRNA = NM_028358
-    | Mm_RefseqProtein = NP_082634
-    | Mm_GenLoc_db =
-    | Mm_GenLoc_chr = 6
-    | Mm_GenLoc_start = 40401022
-    | Mm_GenLoc_end = 40408194
-    | Mm_Uniprot = Q8R2K3
-  }}
-}}
-'''Single-stranded DNA binding protein 1''', also known as '''SSBP1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: SSBP1 single-stranded DNA binding protein 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=6742| accessdate = }}</ref>
-<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
+SSBP 1 is a housekeeping gene involved in mitochondrial biogenesis (Tiranti et al., 1995).[supplied by OMIM]<ref name="entrez" />
-{{PBB_Summary
-| section_title =
-| summary_text = SSBP is a housekeeping gene involved in mitochondrial biogenesis (Tiranti et al., 1995).[supplied by OMIM]<ref name="entrez">{{cite web | title = Entrez Gene: SSBP1 single-stranded DNA binding protein 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=6742| accessdate = }}</ref>
-}}
-==References==
+== References ==
-{{reflist|2}}
+{{reflist}}
-==Further reading==
+== Further reading ==
 {{refbegin | 2}}
-{{PBB_Further_reading
+* {{cite journal | vauthors = Tiranti V, Rocchi M, DiDonato S, Zeviani M | title = Cloning of human and rat cDNAs encoding the mitochondrial single-stranded DNA-binding protein (SSB) | journal = Gene | volume = 126 | issue = 2 | pages = 219–25 | date = April 1993 | pmid = 8482537 | doi = 10.1016/0378-1119(93)90370-I }}
-| citations =
+* {{cite journal | vauthors = Yang C, Curth U, Urbanke C, Kang C | title = Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4 A resolution | journal = Nature Structural Biology | volume = 4 | issue = 2 | pages = 153–7 | date = February 1997 | pmid = 9033597 | doi = 10.1038/nsb0297-153 }}
-*{{cite journal  | author=Tiranti V, Rossi E, Ruiz-Carrillo A, ''et al.'' |title=Chromosomal localization of mitochondrial transcription factor A (TCF6), single-stranded DNA-binding protein (SSBP), and endonuclease G (ENDOG), three human housekeeping genes involved in mitochondrial biogenesis. |journal=Genomics |volume=25 |issue= 2 |pages= 559-64 |year= 1995 |pmid= 7789991 |doi=  }}
+* {{cite journal | vauthors = Schultz RA, Swoap SJ, McDaniel LD, Zhang B, Koon EC, Garry DJ, Li K, Williams RS | title = Differential expression of mitochondrial DNA replication factors in mammalian tissues | journal = The Journal of Biological Chemistry | volume = 273 | issue = 6 | pages = 3447–51 | date = February 1998 | pmid = 9452467 | doi = 10.1074/jbc.273.6.3447 }}
-*{{cite journal  | author=Tiranti V, Rocchi M, DiDonato S, Zeviani M |title=Cloning of human and rat cDNAs encoding the mitochondrial single-stranded DNA-binding protein (SSB). |journal=Gene |volume=126 |issue= 2 |pages= 219-25 |year= 1993 |pmid= 8482537 |doi=  }}
+* {{cite journal | vauthors = Spelbrink JN, Toivonen JM, Hakkaart GA, Kurkela JM, Cooper HM, Lehtinen SK, Lecrenier N, Back JW, Speijer D, Foury F, Jacobs HT | title = In vivo functional analysis of the human mitochondrial DNA polymerase POLG expressed in cultured human cells | journal = The Journal of Biological Chemistry | volume = 275 | issue = 32 | pages = 24818–28 | date = August 2000 | pmid = 10827171 | doi = 10.1074/jbc.M000559200 }}
-*{{cite journal  | author=Yang C, Curth U, Urbanke C, Kang C |title=Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4 A resolution. |journal=Nat. Struct. Biol. |volume=4 |issue= 2 |pages= 153-7 |year= 1997 |pmid= 9033597 |doi=  }}
+* {{cite journal | vauthors = Müller-Höcker J, Schäfer S, Li K | title = Immunocytochemical localization of mitochondrial single-stranded DNA-binding protein in mitochondria-rich cells of normal and neoplastic human tissue | journal = Applied Immunohistochemistry & Molecular Morphology | volume = 9 | issue = 3 | pages = 276–80 | date = September 2001 | pmid = 11556757 | doi = 10.1097/00022744-200109000-00013 }}
-*{{cite journal  | author=Schultz RA, Swoap SJ, McDaniel LD, ''et al.'' |title=Differential expression of mitochondrial DNA replication factors in mammalian tissues. |journal=J. Biol. Chem. |volume=273 |issue= 6 |pages= 3447-51 |year= 1998 |pmid= 9452467 |doi=  }}
+* {{cite journal | vauthors = Takamatsu C, Umeda S, Ohsato T, Ohno T, Abe Y, Fukuoh A, Shinagawa H, Hamasaki N, Kang D | title = Regulation of mitochondrial D-loops by transcription factor A and single-stranded DNA-binding protein | journal = EMBO Reports | volume = 3 | issue = 5 | pages = 451–6 | date = May 2002 | pmid = 11964388 | pmc = 1084112 | doi = 10.1093/embo-reports/kvf099 }}
-*{{cite journal  | author=Spelbrink JN, Toivonen JM, Hakkaart GA, ''et al.'' |title=In vivo functional analysis of the human mitochondrial DNA polymerase POLG expressed in cultured human cells. |journal=J. Biol. Chem. |volume=275 |issue= 32 |pages= 24818-28 |year= 2000 |pmid= 10827171 |doi= 10.1074/jbc.M000559200 }}
+* {{cite journal | vauthors = Chen L, Segal D, Hukriede NA, Podtelejnikov AV, Bayarsaihan D, Kennison JA, Ogryzko VV, Dawid IB, Westphal H | title = Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 99 | issue = 22 | pages = 14320–5 | date = October 2002 | pmid = 12381786 | pmc = 137882 | doi = 10.1073/pnas.212532399 }}
-*{{cite journal  | author=Müller-Höcker J, Schäfer S, Li K |title=Immunocytochemical localization of mitochondrial single-stranded DNA-binding protein in mitochondria-rich cells of normal and neoplastic human tissue. |journal=Appl. Immunohistochem. Mol. Morphol. |volume=9 |issue= 3 |pages= 276-80 |year= 2002 |pmid= 11556757 |doi=  }}
+* {{cite journal | vauthors = Diez-Tascón C, Dodds KG, Crawford AM | title = Linkage mapping of the ovine single-stranded DNA-binding protein 1 (SSBP1) using microsatellite marker OARCDT7 | journal = Animal Genetics | volume = 33 | issue = 6 | pages = 468 | date = December 2002 | pmid = 12464025 | doi = 10.1046/j.1365-2052.2002.00938_1.x }}
-*{{cite journal  | author=Takamatsu C, Umeda S, Ohsato T, ''et al.'' |title=Regulation of mitochondrial D-loops by transcription factor A and single-stranded DNA-binding protein. |journal=EMBO Rep. |volume=3 |issue= 5 |pages= 451-6 |year= 2002 |pmid= 11964388 |doi= 10.1093/embo-reports/kvf099 }}
+* {{cite journal | vauthors = Bayarsaihan D | title = SSDP1 gene encodes a protein with a conserved N-terminal FORWARD domain | journal = Biochimica et Biophysica Acta | volume = 1599 | issue = 1-2 | pages = 152–5 | date = September 2002 | pmid = 12479417 | doi = 10.1016/s1570-9639(02)00376-x }}
-*{{cite journal  | author=Chen L, Segal D, Hukriede NA, ''et al.'' |title=Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 22 |pages= 14320-5 |year= 2002 |pmid= 12381786 |doi= 10.1073/pnas.212532399 }}
+* {{cite journal | vauthors = Pocernich CB, Poon HF, Boyd-Kimball D, Lynn BC, Nath A, Klein JB, Butterfield DA | title = Proteomic analysis of oxidatively modified proteins induced by the mitochondrial toxin 3-nitropropionic acid in human astrocytes expressing the HIV protein tat | journal = Brain Research. Molecular Brain Research | volume = 133 | issue = 2 | pages = 299–306 | date = February 2005 | pmid = 15710247 | doi = 10.1016/j.molbrainres.2004.10.024 }}
-*{{cite journal  | author=Diez-Tascón C, Dodds KG, Crawford AM |title=Linkage mapping of the ovine single-stranded DNA-binding protein 1 (SSBP1) using microsatellite marker OARCDT7. |journal=Anim. Genet. |volume=33 |issue= 6 |pages= 468 |year= 2003 |pmid= 12464025 |doi=  }}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
-*{{cite journal  | author=Bayarsaihan D |title=SSDP1 gene encodes a protein with a conserved N-terminal FORWARD domain. |journal=Biochim. Biophys. Acta |volume=1599 |issue= 1-2 |pages= 152-5 |year= 2003 |pmid= 12479417 |doi=  }}
-*{{cite journal  | author=Scherer SW, Cheung J, MacDonald JR, ''et al.'' |title=Human chromosome 7: DNA sequence and biology. |journal=Science |volume=300 |issue= 5620 |pages= 767-72 |year= 2003 |pmid= 12690205 |doi= 10.1126/science.1083423 }}
-*{{cite journal  | author=Hillier LW, Fulton RS, Fulton LA, ''et al.'' |title=The DNA sequence of human chromosome 7. |journal=Nature |volume=424 |issue= 6945 |pages= 157-64 |year= 2003 |pmid= 12853948 |doi= 10.1038/nature01782 }}
-*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
-*{{cite journal  | author=Pocernich CB, Poon HF, Boyd-Kimball D, ''et al.'' |title=Proteomic analysis of oxidatively modified proteins induced by the mitochondrial toxin 3-nitropropionic acid in human astrocytes expressing the HIV protein tat. |journal=Brain Res. Mol. Brain Res. |volume=133 |issue= 2 |pages= 299-306 |year= 2005 |pmid= 15710247 |doi= 10.1016/j.molbrainres.2004.10.024 }}
-}}
 {{refend}}
-{{protein-stub}}
+{{PDB Gallery|geneid=6742}}
-{{WikiDoc Sources}}
+{{gene-7-stub}}

SSBP1: Difference between revisions

Latest revision as of 07:05, 11 September 2017

Function

References

Further reading

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