TMPRSS3: Difference between revisions

Jump to navigation Jump to search
m (Robot: Automated text replacement (-{{reflist}} +{{reflist|2}}, -<references /> +{{reflist|2}}, -{{WikiDoc Cardiology Network Infobox}} +))
 
m (Bot: HTTP→HTTPS)
 
Line 1: Line 1:
<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{Infobox_gene}}
{{PBB_Controls
'''Transmembrane protease, serine 3''' is an [[enzyme]] that in humans is encoded by the ''TMPRSS3'' [[gene]].<ref name="pmid11462234">{{cite journal | vauthors = Masmoudi S, Antonarakis SE, Schwede T, Ghorbel AM, Gratri M, Pappasavas MP, Drira M, Elgaied-Boulila A, Wattenhofer M, Rossier C, Scott HS, Ayadi H, Guipponi M | title = Novel missense mutations of TMPRSS3 in two consanguineous Tunisian families with non-syndromic autosomal recessive deafness | journal = Hum Mutat | volume = 18 | issue = 2 | pages = 101–8 |date=Jul 2001 | pmid = 11462234 | pmc =  | doi = 10.1002/humu.1159 }}</ref><ref name="pmid11907649">{{cite journal | vauthors = Wattenhofer M, Di Iorio MV, Rabionet R, Dougherty L, Pampanos A, Schwede T, Montserrat-Sentis B, Arbones ML, Iliades T, Pasquadibisceglie A, D'Amelio M, Alwan S, Rossier C, Dahl HH, Petersen MB, Estivill X, Gasparini P, Scott HS, Antonarakis SE | title = Mutations in the TMPRSS3 gene are a rare cause of childhood nonsyndromic deafness in Caucasian patients | journal = J Mol Med | volume = 80 | issue = 2 | pages = 124–31 |date=Mar 2002 | pmid = 11907649 | pmc =  | doi = 10.1007/s00109-001-0310-6 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: TMPRSS3 transmembrane protease, serine 3| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=64699| accessdate = }}</ref>
| update_page = yes
| require_manual_inspection = no
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}


<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
== Function ==
{{GNF_Protein_box
| image =
| image_source =
| PDB =
| Name = Transmembrane protease, serine 3
| HGNCid = 11877
| Symbol = TMPRSS3
| AltSymbols =; DFNB10; DFNB8; ECHOS1; TADG12
| OMIM = 605511
| ECnumber = 
| Homologene = 56985
| MGIid = 2155445
| GeneAtlas_image1 = PBB_GE_TMPRSS3_220177_s_at_tn.png
| Function = {{GNF_GO|id=GO:0004252 |text = serine-type endopeptidase activity}} {{GNF_GO|id=GO:0005044 |text = scavenger receptor activity}} {{GNF_GO|id=GO:0008233 |text = peptidase activity}} {{GNF_GO|id=GO:0017080 |text = sodium channel regulator activity}}
| Component = {{GNF_GO|id=GO:0005783 |text = endoplasmic reticulum}} {{GNF_GO|id=GO:0005789 |text = endoplasmic reticulum membrane}} {{GNF_GO|id=GO:0016020 |text = membrane}} {{GNF_GO|id=GO:0016021 |text = integral to membrane}}
| Process = {{GNF_GO|id=GO:0006508 |text = proteolysis}} {{GNF_GO|id=GO:0006883 |text = cellular sodium ion homeostasis}} {{GNF_GO|id=GO:0007605 |text = sensory perception of sound}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 64699
    | Hs_Ensembl = ENSG00000160183
    | Hs_RefseqProtein = NP_076927
    | Hs_RefseqmRNA = NM_024022
    | Hs_GenLoc_db = 
    | Hs_GenLoc_chr = 21
    | Hs_GenLoc_start = 42665069
    | Hs_GenLoc_end = 42690024
    | Hs_Uniprot = P57727
    | Mm_EntrezGene = 140765
    | Mm_Ensembl = 
    | Mm_RefseqmRNA = XM_992288
    | Mm_RefseqProtein = XP_997382
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 
    | Mm_GenLoc_start = 
    | Mm_GenLoc_end = 
    | Mm_Uniprot = 
  }}
}}
'''Transmembrane protease, serine 3''', also known as '''TMPRSS3''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: TMPRSS3 transmembrane protease, serine 3| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=64699| accessdate = }}</ref>


<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
This gene encodes a member of the [[serine protease]] family. The encoded protein contains a serine protease domain, a [[transmembrane domain]], an [[LDL receptor]]-like domain, and a [[scavenger receptor (immunology)|scavenger receptor]] [[cysteine]]-rich domain. Serine proteases are known to be involved in a variety of biological processes, whose malfunction often leads to human diseases and disorders. This gene was identified by its association with both congenital and childhood onset [[autosomal recessive]] deafness. This gene is expressed in fetal [[cochlea]] and many other tissues, and is thought to be involved in the development and maintenance of the [[inner ear]] or the contents of the [[perilymph]] and [[endolymph]]. This gene was also identified as a [[tumor]] associated gene that is overexpressed in ovarian tumors. Four [[alternatively spliced]] variants have been described, two of which encode identical products.<ref name="entrez" />
{{PBB_Summary
| section_title =
| summary_text = This gene encodes a protein that belongs to the serine protease family. The encoded protein contains a serine protease domain, a transmembrane domain, an LDL receptor-like domain, and a scavenger receptor cysteine-rich domain. Serine proteases are known to be involved in a variety of biological processes, whose malfunction often leads to human diseases and disorders. This gene was identified by its association with both congenital and childhood onset autosomal recessive deafness. This gene is expressed in fetal cochlea and many other tissues, and is thought to be involved in the development and maintenance of the inner ear or the contents of the perilymph and endolymph. This gene was also identified as a tumor associated gene that is overexpressed in ovarian tumors. Four alternatively spliced variants have been described, two of which encode identical products.<ref name="entrez">{{cite web | title = Entrez Gene: TMPRSS3 transmembrane protease, serine 3| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=64699| accessdate = }}</ref>
}}


==References==
==References==
{{reflist|2}}
{{reflist}}
 
==Further reading==
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading
*{{cite journal  | vauthors=Guipponi M, Antonarakis SE, Scott HS |title=TMPRSS3, a type II transmembrane serine protease mutated in non-syndromic autosomal recessive deafness. |journal=Front. Biosci. |volume=13 |issue=  13|pages= 1557–67 |year= 2007 |pmid= 17981648 |doi=10.2741/2780 }}
| citations =
*{{cite journal   |vauthors=Bonné-Tamir B, DeStefano AL, Briggs CE, etal |title=Linkage of congenital recessive deafness (gene DFNB10) to chromosome 21q22.3. |journal=Am. J. Hum. Genet. |volume=58 |issue= 6 |pages= 1254–9 |year= 1996 |pmid= 8651303 |doi= | pmc=1915077 }}
*{{cite journal  | author=Guipponi M, Antonarakis SE, Scott HS |title=TMPRSS3, a type II transmembrane serine protease mutated in non-syndromic autosomal recessive deafness. |journal=Front. Biosci. |volume=13 |issue=  |pages= 1557-67 |year= 2007 |pmid= 17981648 |doi=  }}
*{{cite journal   |vauthors=Wallrapp C, Hähnel S, Müller-Pillasch F, etal |title=A novel transmembrane serine protease (TMPRSS3) overexpressed in pancreatic cancer. |journal=Cancer Res. |volume=60 |issue= 10 |pages= 2602–6 |year= 2000 |pmid= 10825129 |doi=  }}
*{{cite journal | author=Bonné-Tamir B, DeStefano AL, Briggs CE, ''et al.'' |title=Linkage of congenital recessive deafness (gene DFNB10) to chromosome 21q22.3. |journal=Am. J. Hum. Genet. |volume=58 |issue= 6 |pages= 1254-9 |year= 1996 |pmid= 8651303 |doi=  }}
*{{cite journal   |vauthors=Hattori M, Fujiyama A, Taylor TD, etal |title=The DNA sequence of human chromosome 21. |journal=Nature |volume=405 |issue= 6784 |pages= 311–9 |year= 2000 |pmid= 10830953 |doi= 10.1038/35012518 }}
*{{cite journal | author=Wallrapp C, Hähnel S, Müller-Pillasch F, ''et al.'' |title=A novel transmembrane serine protease (TMPRSS3) overexpressed in pancreatic cancer. |journal=Cancer Res. |volume=60 |issue= 10 |pages= 2602-6 |year= 2000 |pmid= 10825129 |doi=  }}
*{{cite journal   |vauthors=Underwood LJ, Shigemasa K, Tanimoto H, etal |title=Ovarian tumor cells express a novel multi-domain cell surface serine protease. |journal=Biochim. Biophys. Acta |volume=1502 |issue= 3 |pages= 337–50 |year= 2001 |pmid= 11068177 |doi=  10.1016/s0925-4439(00)00058-2}}
*{{cite journal | author=Hattori M, Fujiyama A, Taylor TD, ''et al.'' |title=The DNA sequence of human chromosome 21. |journal=Nature |volume=405 |issue= 6784 |pages= 311-9 |year= 2000 |pmid= 10830953 |doi= 10.1038/35012518 }}
*{{cite journal   |vauthors=Scott HS, Kudoh J, Wattenhofer M, etal |title=Insertion of beta-satellite repeats identifies a transmembrane protease causing both congenital and childhood onset autosomal recessive deafness. |journal=Nat. Genet. |volume=27 |issue= 1 |pages= 59–63 |year= 2001 |pmid= 11137999 |doi= 10.1038/83768 }}
*{{cite journal | author=Underwood LJ, Shigemasa K, Tanimoto H, ''et al.'' |title=Ovarian tumor cells express a novel multi-domain cell surface serine protease. |journal=Biochim. Biophys. Acta |volume=1502 |issue= 3 |pages= 337-50 |year= 2001 |pmid= 11068177 |doi=  }}
*{{cite journal   |vauthors=Ben-Yosef T, Wattenhofer M, Riazuddin S, etal |title=Novel mutations of TMPRSS3 in four DFNB8/B10      families segregating congenital autosomal recessive      deafness. |journal=J. Med. Genet. |volume=38 |issue= 6 |pages= 396–400 |year= 2001 |pmid= 11424922 |doi=  10.1136/jmg.38.6.396| pmc=1734898  }}
*{{cite journal | author=Scott HS, Kudoh J, Wattenhofer M, ''et al.'' |title=Insertion of beta-satellite repeats identifies a transmembrane protease causing both congenital and childhood onset autosomal recessive deafness. |journal=Nat. Genet. |volume=27 |issue= 1 |pages= 59-63 |year= 2001 |pmid= 11137999 |doi= 10.1038/83768 }}
*{{cite journal   |vauthors=Guipponi M, Vuagniaux G, Wattenhofer M, etal |title=The transmembrane serine protease (TMPRSS3) mutated in deafness DFNB8/10 activates the epithelial sodium channel (ENaC) in vitro. |journal=Hum. Mol. Genet. |volume=11 |issue= 23 |pages= 2829–36 |year= 2003 |pmid= 12393794 |doi=10.1093/hmg/11.23.2829  }}
*{{cite journal | author=Ben-Yosef T, Wattenhofer M, Riazuddin S, ''et al.'' |title=Novel mutations of TMPRSS3 in four DFNB8/B10      families segregating congenital autosomal recessive      deafness. |journal=J. Med. Genet. |volume=38 |issue= 6 |pages= 396-400 |year= 2001 |pmid= 11424922 |doi=  }}
*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 }}
*{{cite journal | author=Masmoudi S, Antonarakis SE, Schwede T, ''et al.'' |title=Novel missense mutations of TMPRSS3 in two consanguineous Tunisian families with non-syndromic autosomal recessive deafness. |journal=Hum. Mutat. |volume=18 |issue= 2 |pages= 101-8 |year= 2001 |pmid= 11462234 |doi= 10.1002/humu.1159 }}
*{{cite journal  | vauthors=Lee YJ, Park D, Kim SY, Park WJ |title=Pathogenic mutations but not polymorphisms in congenital and childhood onset autosomal recessive deafness disrupt the proteolytic activity of TMPRSS3. |journal=J. Med. Genet. |volume=40 |issue= 8 |pages= 629–31 |year= 2003 |pmid= 12920079 |doi=  10.1136/jmg.40.8.629| pmc=1735556  }}
*{{cite journal | author=Wattenhofer M, Di Iorio MV, Rabionet R, ''et al.'' |title=Mutations in the TMPRSS3 gene are a rare cause of childhood nonsyndromic deafness in Caucasian patients. |journal=J. Mol. Med. |volume=80 |issue= 2 |pages= 124-31 |year= 2002 |pmid= 11907649 |doi= 10.1007/s00109-001-0310-6 }}
*{{cite journal   |vauthors=Clark HF, Gurney AL, Abaya E, etal |title=The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. |journal=Genome Res. |volume=13 |issue= 10 |pages= 2265–70 |year= 2003 |pmid= 12975309 |doi= 10.1101/gr.1293003  | pmc=403697 }}
*{{cite journal  | author=Guipponi M, Vuagniaux G, Wattenhofer M, ''et al.'' |title=The transmembrane serine protease (TMPRSS3) mutated in deafness DFNB8/10 activates the epithelial sodium channel (ENaC) in vitro. |journal=Hum. Mol. Genet. |volume=11 |issue= 23 |pages= 2829-36 |year= 2003 |pmid= 12393794 |doi=  }}
*{{cite journal   |vauthors=Ota T, Suzuki Y, Nishikawa T, etal |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal   |vauthors=Ahmed ZM, Li XC, Powell SD, etal |title=Characterization of a new full length TMPRSS3 isoform and identification of mutant alleles responsible for nonsyndromic recessive deafness in Newfoundland and Pakistan. |journal=BMC Med. Genet. |volume=5|pages= 24 |year= 2004 |pmid= 15447792 |doi= 10.1186/1471-2350-5-24  | pmc=523852 }}
*{{cite journal | author=Lee YJ, Park D, Kim SY, Park WJ |title=Pathogenic mutations but not polymorphisms in congenital and childhood onset autosomal recessive deafness disrupt the proteolytic activity of TMPRSS3. |journal=J. Med. Genet. |volume=40 |issue= 8 |pages= 629-31 |year= 2003 |pmid= 12920079 |doi= }}
*{{cite journal   |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504  | pmc=528928 }}
*{{cite journal | author=Clark HF, Gurney AL, Abaya E, ''et al.'' |title=The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. |journal=Genome Res. |volume=13 |issue= 10 |pages= 2265-70 |year= 2003 |pmid= 12975309 |doi= 10.1101/gr.1293003 }}
*{{cite journal   |vauthors=Wattenhofer M, Sahin-Calapoglu N, Andreasen D, etal |title=A novel TMPRSS3 missense mutation in a DFNB8/10 family prevents proteolytic activation of the protein. |journal=Hum. Genet. |volume=117 |issue= 6 |pages= 528–35 |year= 2005 |pmid= 16021470 |doi= 10.1007/s00439-005-1332-x }}
*{{cite journal | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal   |vauthors=Stelzl U, Worm U, Lalowski M, etal |title=A human protein-protein interaction network: a resource for annotating the proteome. |journal=Cell |volume=122 |issue= 6 |pages= 957–68 |year= 2005 |pmid= 16169070 |doi= 10.1016/j.cell.2005.08.029 }}
*{{cite journal | author=Ahmed ZM, Li XC, Powell SD, ''et al.'' |title=Characterization of a new full length TMPRSS3 isoform and identification of mutant alleles responsible for nonsyndromic recessive deafness in Newfoundland and Pakistan. |journal=BMC Med. Genet. |volume=5 |issue= |pages= 24 |year= 2004 |pmid= 15447792 |doi= 10.1186/1471-2350-5-24 }}
*{{cite journal   |vauthors=Hu YH, Warnatz HJ, Vanhecke D, etal |title=Cell array-based intracellular localization screening reveals novel functional features of human chromosome 21 proteins. |journal=BMC Genomics |volume=7|pages= 155 |year= 2006 |pmid= 16780588 |doi= 10.1186/1471-2164-7-155  | pmc=1526728 }}
*{{cite journal | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{cite journal   |vauthors=Elbracht M, Senderek J, Eggermann T, etal |title=Autosomal recessive postlingual hearing loss (DFNB8): compound heterozygosity for two novel TMPRSS3 mutations in German siblings. |journal=J. Med. Genet. |volume=44 |issue= 6 |pages= e81 |year= 2007 |pmid= 17551081 |doi= 10.1136/jmg.2007.049122 |pmc=2752172}}
*{{cite journal | author=Wattenhofer M, Sahin-Calapoglu N, Andreasen D, ''et al.'' |title=A novel TMPRSS3 missense mutation in a DFNB8/10 family prevents proteolytic activation of the protein. |journal=Hum. Genet. |volume=117 |issue= 6 |pages= 528-35 |year= 2005 |pmid= 16021470 |doi= 10.1007/s00439-005-1332-x }}
*{{cite journal | author=Stelzl U, Worm U, Lalowski M, ''et al.'' |title=A human protein-protein interaction network: a resource for annotating the proteome. |journal=Cell |volume=122 |issue= 6 |pages= 957-68 |year= 2005 |pmid= 16169070 |doi= 10.1016/j.cell.2005.08.029 }}
*{{cite journal  | author=Hu YH, Warnatz HJ, Vanhecke D, ''et al.'' |title=Cell array-based intracellular localization screening reveals novel functional features of human chromosome 21 proteins. |journal=BMC Genomics |volume=7 |issue=  |pages= 155 |year= 2006 |pmid= 16780588 |doi= 10.1186/1471-2164-7-155 }}
*{{cite journal  | author=Elbracht M, Senderek J, Eggermann T, ''et al.'' |title=Autosomal recessive postlingual hearing loss (DFNB8): compound heterozygosity for two novel TMPRSS3 mutations in German siblings. |journal=J. Med. Genet. |volume=44 |issue= 6 |pages= e81 |year= 2007 |pmid= 17551081 |doi= 10.1136/jmg.2007.049122 }}
}}
{{refend}}
{{refend}}


{{gene-21-stub}}
{{gene-21-stub}}
{{WikiDoc Sources}}

Latest revision as of 12:03, 15 September 2017

VALUE_ERROR (nil)
Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Transmembrane protease, serine 3 is an enzyme that in humans is encoded by the TMPRSS3 gene.[1][2][3]

Function

This gene encodes a member of the serine protease family. The encoded protein contains a serine protease domain, a transmembrane domain, an LDL receptor-like domain, and a scavenger receptor cysteine-rich domain. Serine proteases are known to be involved in a variety of biological processes, whose malfunction often leads to human diseases and disorders. This gene was identified by its association with both congenital and childhood onset autosomal recessive deafness. This gene is expressed in fetal cochlea and many other tissues, and is thought to be involved in the development and maintenance of the inner ear or the contents of the perilymph and endolymph. This gene was also identified as a tumor associated gene that is overexpressed in ovarian tumors. Four alternatively spliced variants have been described, two of which encode identical products.[3]

References

  1. Masmoudi S, Antonarakis SE, Schwede T, Ghorbel AM, Gratri M, Pappasavas MP, Drira M, Elgaied-Boulila A, Wattenhofer M, Rossier C, Scott HS, Ayadi H, Guipponi M (Jul 2001). "Novel missense mutations of TMPRSS3 in two consanguineous Tunisian families with non-syndromic autosomal recessive deafness". Hum Mutat. 18 (2): 101–8. doi:10.1002/humu.1159. PMID 11462234.
  2. Wattenhofer M, Di Iorio MV, Rabionet R, Dougherty L, Pampanos A, Schwede T, Montserrat-Sentis B, Arbones ML, Iliades T, Pasquadibisceglie A, D'Amelio M, Alwan S, Rossier C, Dahl HH, Petersen MB, Estivill X, Gasparini P, Scott HS, Antonarakis SE (Mar 2002). "Mutations in the TMPRSS3 gene are a rare cause of childhood nonsyndromic deafness in Caucasian patients". J Mol Med. 80 (2): 124–31. doi:10.1007/s00109-001-0310-6. PMID 11907649.
  3. 3.0 3.1 "Entrez Gene: TMPRSS3 transmembrane protease, serine 3".

Further reading