Coronavirus classification: Difference between revisions
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__NOTOC__ | __NOTOC__ | ||
{{Coronavirus}} | {{Coronavirus}} | ||
{{CMG}}; {{AE}} {{ADI}} | {{CMG}}; {{AE}} {{ADI}}, {{sab}} | ||
==Overview== | |||
Based on the grouping, coronavirus can be classified into three groups. It can also be classified into families based on the genome and the method of replication. The virus can also be classified based on human infectivity. <br /> | |||
==Classification== | ==Classification== | ||
===Based on Groups=== | ===Based on Groups=== | ||
Genus | Genus ''Coronavirus'' | ||
*Group 1 | *Group 1 | ||
**''[[Canine coronavirus]]'' ([[CCoV]]) | **''[[Canine coronavirus]]'' ([[CCoV]]) | ||
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*Group 2 | *Group 2 | ||
**''[[Bovine coronavirus]]'' ([[BCoV]]) | **''[[Bovine coronavirus]]'' ([[BCoV]]) | ||
**''[[Canine coronavirus|Canine respiratory coronavirus]]'' (CRCoV) - Common in SE Asia and Micronesia | **''[[Canine coronavirus|Canine respiratory coronavirus]]'' (CRCoV) - Common in SE Asia and Micronesia | ||
**''Human coronavirus OC43'' (HCoV-OC43) | **''Human coronavirus OC43'' (HCoV-OC43) | ||
**''[[Mouse hepatitis virus]]'' (MHV) | **''[[Mouse hepatitis virus]]'' (MHV) | ||
**''Porcine hemagglutinating encephalomyelitis virus'' (HEV) | **''Porcine hemagglutinating encephalomyelitis virus'' (HEV) | ||
**''Rat coronavirus'' (RCV): Rat | **''Rat coronavirus'' (RCV): Rat coronavirus is quite prevalent in Eastern Australia where, as of March/April 2008, it has been found among native and feral rodents colonies. | ||
**''HCoV-HKU1''<ref>{{cite journal | author=Woo PC, Lau SK, Chu CM, ''et al.'' | title=Characterization and complete genome sequence of a novel coronavirus, coronavirus HKU1, from patients with pneumonia | journal=J Virol | year=2005 | volume=79 | pages=884–95 | doi=10.1128/JVI.79.2.884-895.2005}}</ref><ref>{{cite journal | author=Vabret A, Dina J, Gouarin S, ''et al.'' | title=Detection of the new human coronavirus HKU1: a report of 6 cases | journal=Clin Infect Dis | year=2006 | volume=42 | pages=634–9 | doi=10.1086/500136}}</ref> | **''HCoV-HKU1''<ref>{{cite journal | author=Woo PC, Lau SK, Chu CM, ''et al.'' | title=Characterization and complete genome sequence of a novel coronavirus, coronavirus HKU1, from patients with pneumonia | journal=J Virol | year=2005 | volume=79 | pages=884–95 | doi=10.1128/JVI.79.2.884-895.2005}}</ref><ref>{{cite journal | author=Vabret A, Dina J, Gouarin S, ''et al.'' | title=Detection of the new human coronavirus HKU1: a report of 6 cases | journal=Clin Infect Dis | year=2006 | volume=42 | pages=634–9 | doi=10.1086/500136}}</ref> | ||
*Group 3 | *Group 3 | ||
**''[[avian infectious bronchitis virus|Infectious bronchitis virus]]'' (IBV) | **''[[avian infectious bronchitis virus|Infectious bronchitis virus]]'' ([[IBV]]) | ||
**''[[Turkey coronavirus]]'' ([[Bluecomb disease virus]]) | **''[[Turkey coronavirus]]'' ([[Bluecomb disease virus]]) | ||
**''Goose coronavirus'' | **''Goose coronavirus'' | ||
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*HCoV-OC43 | *HCoV-OC43 | ||
*[[SARS-CoV]] | *[[SARS-CoV]] | ||
*NL63/NL/New Haven coronavirus | *[[HCoV-NL63|NL63/NL/New Haven coronavirus]] | ||
*HKU1-CoV | *HKU1-CoV | ||
*[[Novel Coronavirus 2012]] | *[[Novel Coronavirus 2012]] ([[HCoV-EMC]]) | ||
* | *SARS-CoV-2 | ||
*MERS-CoV | |||
==References== | ==References== | ||
Latest revision as of 20:31, 9 March 2020
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Editor-In-Chief: C. Michael Gibson, M.S., M.D. [1]; Associate Editor(s)-in-Chief: Aditya Govindavarjhulla, M.B.B.S. [2], Sabawoon Mirwais, M.B.B.S, M.D.[3]
Overview
Based on the grouping, coronavirus can be classified into three groups. It can also be classified into families based on the genome and the method of replication. The virus can also be classified based on human infectivity.
Classification
Based on Groups
Genus Coronavirus
- Group 1
- Canine coronavirus (CCoV)
- Feline coronavirus (FeCoV)
- Human coronavirus 229E (HCoV-229E)
- Porcine epidemic diarrhea virus (PEDV)
- Transmissible gastroenteritis virus (TGEV)
- Human Coronavirus NL63 (HCoV-NL63)
- Group 2
- Bovine coronavirus (BCoV)
- Canine respiratory coronavirus (CRCoV) - Common in SE Asia and Micronesia
- Human coronavirus OC43 (HCoV-OC43)
- Mouse hepatitis virus (MHV)
- Porcine hemagglutinating encephalomyelitis virus (HEV)
- Rat coronavirus (RCV): Rat coronavirus is quite prevalent in Eastern Australia where, as of March/April 2008, it has been found among native and feral rodents colonies.
- HCoV-HKU1[1][2]
- Group 3
- Infectious bronchitis virus (IBV)
- Turkey coronavirus (Bluecomb disease virus)
- Goose coronavirus
- Duck coronavirus
Based on Baltimore Classification
The Baltimore classification, developed by David Baltimore, is a virus classification system that groups viruses into families, depending on their type of genome (DNA, RNA, single-stranded (ss), double-stranded (ds), etc.) and their method of replication.[3]
- Virus
- ssRNA positive-strand viruses
- No DNA stage
- Nidovirales
- Coronaviridae
- Coronavirus
- HCoV-229E
- HCoV-OC43
- SARS-CoV
- NL63/NL/New Haven coronavirus
- HKU1-CoV
- Novel Coronavirus 2012 (HCoV-EMC)
- SARS-CoV-2
- MERS-CoV
References
- ↑ Woo PC, Lau SK, Chu CM; et al. (2005). "Characterization and complete genome sequence of a novel coronavirus, coronavirus HKU1, from patients with pneumonia". J Virol. 79: 884&ndash, 95. doi:10.1128/JVI.79.2.884-895.2005.
- ↑ Vabret A, Dina J, Gouarin S; et al. (2006). "Detection of the new human coronavirus HKU1: a report of 6 cases". Clin Infect Dis. 42: 634&ndash, 9. doi:10.1086/500136.