NLRP2: Difference between revisions
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'''NACHT, LRR and PYD domains-containing protein 2''' is a [[protein]] that in humans is encoded by the ''NLRP2'' [[gene]].<ref name="pmid12563287">{{cite journal | vauthors = Tschopp J, Martinon F, Burns K | title = NALPs: a novel protein family involved in inflammation | journal = Nat Rev Mol Cell Biol | volume = 4 | issue = 2 | pages = 95–104 |date=Feb 2003 | pmid = 12563287 | pmc = | doi = 10.1038/nrm1019 }}</ref><ref name="pmid11270363">{{cite journal | vauthors = Bertin J, DiStefano PS | title = The PYRIN domain: a novel motif found in apoptosis and inflammation proteins | journal = Cell Death Differ | volume = 7 | issue = 12 | pages = 1273–4 |date=Mar 2001 | pmid = 11270363 | pmc = | doi = 10.1038/sj.cdd.4400774 }}</ref><ref name="entrez"/> | '''NACHT, LRR and PYD domains-containing protein 2''' is a [[protein]] that in humans is encoded by the ''NLRP2'' [[gene]].<ref name="pmid12563287">{{cite journal | vauthors = Tschopp J, Martinon F, Burns K | title = NALPs: a novel protein family involved in inflammation | journal = Nat Rev Mol Cell Biol | volume = 4 | issue = 2 | pages = 95–104 |date=Feb 2003 | pmid = 12563287 | pmc = | doi = 10.1038/nrm1019 }}</ref><ref name="pmid11270363">{{cite journal | vauthors = Bertin J, DiStefano PS | title = The PYRIN domain: a novel motif found in apoptosis and inflammation proteins | journal = Cell Death Differ | volume = 7 | issue = 12 | pages = 1273–4 |date=Mar 2001 | pmid = 11270363 | pmc = | doi = 10.1038/sj.cdd.4400774 }}</ref><ref name="entrez"/> | ||
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| summary_text = NALP proteins, such as NALP2, are characterized by an N-terminal pyrin (MIM 608107) domain (PYD) and are involved in the activation of caspase-1 (CASP1; MIM 147678) by Toll-like receptors (see TLR4; MIM 603030). They may also be involved in protein complexes that activate proinflammatory caspases (Tschopp et al., 2003).[supplied by OMIM]<ref name="entrez">{{cite web | title = Entrez Gene: NLRP2 NLR family, pyrin domain containing 2| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=55655| accessdate = }}</ref> | | summary_text = NALP proteins, such as NALP2, are characterized by an N-terminal pyrin (MIM 608107) domain (PYD) and are involved in the activation of caspase-1 (CASP1; MIM 147678) by Toll-like receptors (see TLR4; MIM 603030). They may also be involved in protein complexes that activate proinflammatory caspases (Tschopp et al., 2003).[supplied by OMIM]<ref name="entrez">{{cite web | title = Entrez Gene: NLRP2 NLR family, pyrin domain containing 2| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=55655| accessdate = }}</ref><ref>{{cite web |title=NLRP2 NLR family pyrin domain containing 2 [ Homo sapiens (human) ] |url=https://www.ncbi.nlm.nih.gov/gene/55655 |website=NCBI}}</ref> | ||
}} | }} | ||
==Description and Functions== | |||
The NLRP2 gene is one of the family members of nucleotide-binding and [[leucine]]-rich repeat receptor (NLR). Information from many literature sources indicates that an N-terminal pyrin effector domain (PYD) is one of the components of the NLRP2 gene. Other components include a centrally-located [[nucleotide]]-binding and oligomerization domain (NACHT) and C-terminal leucine-rich repeats (LRR)<ref>{{cite journal |last1=Minkiewicz, Julia et al |title=Human Astrocytes Express a Novel NLRP2 Inflammasome |journal=Glia |volume=61 |issue=7 |pages=1113–21 |pmid=23625868 |year=2013 |doi=10.1002/glia.22499 }}</ref>. The products of NLRP2 gene are known to interact with IkB kinase (IKK) complex components. It can also regulate the activities of both caspase-1 and nuclear factor kappa-light-chain-enhancer of activated B cells (NF-kB). The pyrin domain is essential and adequate to suppress the activities of NF-kB (Minkiewicz, de Rivero Vaccari and Keane 1113). An allelic variant (rs147585490) is known to block the NF-kB transcriptional activities. NLRP2 gene is one of the NLR family; it is believed to contribute to the regulation of immune responses (Minkiewicz, de Rivero Vaccari and Keane 1121). Although it is not well understood, the NLRP2 gene is responsible for maintaining fertility in females and contributes to the normal birth. The NPRP2 gene encodes for a human protein known as “NACHT, LRR and PYD domains-containing protein 2”<ref>{{cite journal |last1=Acharya, Sudipta et al |title=Novel Symmetry-Based Gene-Gene Dissimilarity Measures Utilizing Gene Ontology: Application In Gene Clustering |journal=Gene |volume=679 |pages=341–351 |pmid=30184472 |year=2018 |doi=10.1016/j.gene.2018.08.062 }}</ref>. NALP2, which is one of the NALP proteins, has an N-terminal pyrin characterization also encoded as MIM 608107 and PYD domain<ref>{{cite journal |last1=Peng, Hui et al |title=NLRP2 And FAF1 Deficiency Blocks Early Embryogenesis In The Mouse |journal=Reproduction (Cambridge, England) |volume=154 |issue=3 |pages=145–151 |pmid=28630100 |year=2017 |doi=10.1530/REP-16-0629 }}</ref>. The NALP2 protein has a role in the activation process of caspase-1, which is encoded as CASP1; MIM 147678. The activation process occurs through the Toll-like receptors. The NALP2 may also take part in protein complexes, which initiates the activation of proinflammatory caspases<ref>{{cite journal |last1=Vizlin-Hodzic, D et al |title=Early Onset of Inflammation during Ontogeny of Bipolar Disorder: The NLRP2 Inflammasome Gene Distinctly Differentiates Between Patients and Healthy Controls in the Transition between Ips Cell and Neural Stem Cell Stages |journal=Translational Psychiatry |volume=7 |issue=1 |pages=e1010 |pmid=28117838 |pmc=5545741 |year=2017 |doi=10.1038/tp.2016.284 }}</ref>. NLR family regulates the functioning of the [[immune system]], which technically compromises the normal functions of the body including reproduction. | |||
===History of Discovery=== | |||
The NLR gene family where the NLRP2 gene belongs was first extracted from zebrafish, which is a common specimen for the study of immune systems. The NLRP2 gene is believed to have originated from the NLR gene family through [[Gene mutation|mutation]]<ref>{{cite journal |last1=Acharya, Sudipta et al |title=Novel Symmetry-Based Gene-Gene Dissimilarity Measures Utilizing Gene Ontology: Application In Gene Clustering |url=https://www.researchgate.net/publication/327387339}}</ref>. The mutation was initiated by the need for organisms to fit a dynamic environment and diversification in the evolution stages<ref>{{cite journal |last1=Yang, Yanqing et al |title=NLRP2 Negatively Regulates Antiviral Immunity by Interacting With TBK1 |journal=European Journal of Immunology |pmid=30183071 |year=2018 |doi=10.1002/eji.201847589 }}</ref>. Also, the mutation of the NLR gene family proteins was also due to the ability of pathogens to subvert the defense mechanism of the host<ref>{{cite journal |last1=Minkiewicz, Julia et al |title=Human Astrocytes Express a Novel NLRP2 Inflammasome |journal=Glia |volume=61 |issue=7 |pages=1113–21 |pmid=23625868 |year=2013 |doi=10.1002/glia.22499 }}</ref>. Therefore, the organisms were forced to device new ways of detecting and counteracting the effects of the resistant [[pathogens]]<ref>{{cite journal |last1=Mahadevan, Sangeetha et al |title=Erratum: Maternally Expressed NLRP2 Links the Subcortical Maternal Complex (SCMC) To Fertility, Embryogenesis and Epigenetic Reprogramming |journal=Scientific Reports |volume=7 |pages=46434 |pmc=5395947 |year=2017 |pmid=28422141 |doi=10.1038/srep46434 }}</ref>. The evolution of the NLR proteins defines the origin of the NLRP2 gene. The NLRP2 gene is now an innate immune sensor for pathogens and sterile stress signal (SSS) in multi-cellular organisms. | |||
===Mutation and Infertility=== | |||
The deficiency of NLRP2 gene results in the inhibition of the activation of oocytes<ref>{{cite journal |last1=Minkiewicz, Julia et al |title=Human Astrocytes Express a Novel NLRP2 Inflammasome |journal=Glia |volume=61 |issue=7 |pages=1113–21 |pmid=23625868 |year=2013 |doi=10.1002/glia.22499 }}</ref>. The NLRP2 gene is exclusively expressed in oocytes. Therefore, it regulates the quality of the oocytes, which explains its relation to infertility in females<ref>{{cite journal |last1=Acharya, Sudipta et al |title=Novel Symmetry-Based Gene-Gene Dissimilarity Measures Utilizing Gene Ontology: Application In Gene Clustering |journal=Gene |volume=679 |pages=341–351 |pmid=30184472 |year=2018 |doi=10.1016/j.gene.2018.08.062 }}</ref>. It is remarkable that the mutation of NLRP2 gene interferes with its normal functions, especially in the activation of oocytes, with consequential infertility in females. The NLR family regulates the functioning of the immune system, which technically compromises the normal functions of the body including reproduction. | |||
==References== | ==References== | ||
{{reflist}} | {{reflist}} |
Latest revision as of 09:11, 11 November 2018
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NACHT, LRR and PYD domains-containing protein 2 is a protein that in humans is encoded by the NLRP2 gene.[1][2][3]
NALP proteins, such as NALP2, are characterized by an N-terminal pyrin (MIM 608107) domain (PYD) and are involved in the activation of caspase-1 (CASP1; MIM 147678) by Toll-like receptors (see TLR4; MIM 603030). They may also be involved in protein complexes that activate proinflammatory caspases (Tschopp et al., 2003).[supplied by OMIM][3][4]
Description and Functions
The NLRP2 gene is one of the family members of nucleotide-binding and leucine-rich repeat receptor (NLR). Information from many literature sources indicates that an N-terminal pyrin effector domain (PYD) is one of the components of the NLRP2 gene. Other components include a centrally-located nucleotide-binding and oligomerization domain (NACHT) and C-terminal leucine-rich repeats (LRR)[5]. The products of NLRP2 gene are known to interact with IkB kinase (IKK) complex components. It can also regulate the activities of both caspase-1 and nuclear factor kappa-light-chain-enhancer of activated B cells (NF-kB). The pyrin domain is essential and adequate to suppress the activities of NF-kB (Minkiewicz, de Rivero Vaccari and Keane 1113). An allelic variant (rs147585490) is known to block the NF-kB transcriptional activities. NLRP2 gene is one of the NLR family; it is believed to contribute to the regulation of immune responses (Minkiewicz, de Rivero Vaccari and Keane 1121). Although it is not well understood, the NLRP2 gene is responsible for maintaining fertility in females and contributes to the normal birth. The NPRP2 gene encodes for a human protein known as “NACHT, LRR and PYD domains-containing protein 2”[6]. NALP2, which is one of the NALP proteins, has an N-terminal pyrin characterization also encoded as MIM 608107 and PYD domain[7]. The NALP2 protein has a role in the activation process of caspase-1, which is encoded as CASP1; MIM 147678. The activation process occurs through the Toll-like receptors. The NALP2 may also take part in protein complexes, which initiates the activation of proinflammatory caspases[8]. NLR family regulates the functioning of the immune system, which technically compromises the normal functions of the body including reproduction.
History of Discovery
The NLR gene family where the NLRP2 gene belongs was first extracted from zebrafish, which is a common specimen for the study of immune systems. The NLRP2 gene is believed to have originated from the NLR gene family through mutation[9]. The mutation was initiated by the need for organisms to fit a dynamic environment and diversification in the evolution stages[10]. Also, the mutation of the NLR gene family proteins was also due to the ability of pathogens to subvert the defense mechanism of the host[11]. Therefore, the organisms were forced to device new ways of detecting and counteracting the effects of the resistant pathogens[12]. The evolution of the NLR proteins defines the origin of the NLRP2 gene. The NLRP2 gene is now an innate immune sensor for pathogens and sterile stress signal (SSS) in multi-cellular organisms.
Mutation and Infertility
The deficiency of NLRP2 gene results in the inhibition of the activation of oocytes[13]. The NLRP2 gene is exclusively expressed in oocytes. Therefore, it regulates the quality of the oocytes, which explains its relation to infertility in females[14]. It is remarkable that the mutation of NLRP2 gene interferes with its normal functions, especially in the activation of oocytes, with consequential infertility in females. The NLR family regulates the functioning of the immune system, which technically compromises the normal functions of the body including reproduction.
References
- ↑ Tschopp J, Martinon F, Burns K (Feb 2003). "NALPs: a novel protein family involved in inflammation". Nat Rev Mol Cell Biol. 4 (2): 95–104. doi:10.1038/nrm1019. PMID 12563287.
- ↑ Bertin J, DiStefano PS (Mar 2001). "The PYRIN domain: a novel motif found in apoptosis and inflammation proteins". Cell Death Differ. 7 (12): 1273–4. doi:10.1038/sj.cdd.4400774. PMID 11270363.
- ↑ 3.0 3.1 "Entrez Gene: NLRP2 NLR family, pyrin domain containing 2".
- ↑ "NLRP2 NLR family pyrin domain containing 2 [ Homo sapiens (human) ]". NCBI.
- ↑ Minkiewicz, Julia; et al. (2013). "Human Astrocytes Express a Novel NLRP2 Inflammasome". Glia. 61 (7): 1113–21. doi:10.1002/glia.22499. PMID 23625868.
- ↑ Acharya, Sudipta; et al. (2018). "Novel Symmetry-Based Gene-Gene Dissimilarity Measures Utilizing Gene Ontology: Application In Gene Clustering". Gene. 679: 341–351. doi:10.1016/j.gene.2018.08.062. PMID 30184472.
- ↑ Peng, Hui; et al. (2017). "NLRP2 And FAF1 Deficiency Blocks Early Embryogenesis In The Mouse". Reproduction (Cambridge, England). 154 (3): 145–151. doi:10.1530/REP-16-0629. PMID 28630100.
- ↑ Vizlin-Hodzic, D; et al. (2017). "Early Onset of Inflammation during Ontogeny of Bipolar Disorder: The NLRP2 Inflammasome Gene Distinctly Differentiates Between Patients and Healthy Controls in the Transition between Ips Cell and Neural Stem Cell Stages". Translational Psychiatry. 7 (1): e1010. doi:10.1038/tp.2016.284. PMC 5545741. PMID 28117838.
- ↑ Acharya, Sudipta; et al. "Novel Symmetry-Based Gene-Gene Dissimilarity Measures Utilizing Gene Ontology: Application In Gene Clustering".
- ↑ Yang, Yanqing; et al. (2018). "NLRP2 Negatively Regulates Antiviral Immunity by Interacting With TBK1". European Journal of Immunology. doi:10.1002/eji.201847589. PMID 30183071.
- ↑ Minkiewicz, Julia; et al. (2013). "Human Astrocytes Express a Novel NLRP2 Inflammasome". Glia. 61 (7): 1113–21. doi:10.1002/glia.22499. PMID 23625868.
- ↑ Mahadevan, Sangeetha; et al. (2017). "Erratum: Maternally Expressed NLRP2 Links the Subcortical Maternal Complex (SCMC) To Fertility, Embryogenesis and Epigenetic Reprogramming". Scientific Reports. 7: 46434. doi:10.1038/srep46434. PMC 5395947. PMID 28422141.
- ↑ Minkiewicz, Julia; et al. (2013). "Human Astrocytes Express a Novel NLRP2 Inflammasome". Glia. 61 (7): 1113–21. doi:10.1002/glia.22499. PMID 23625868.
- ↑ Acharya, Sudipta; et al. (2018). "Novel Symmetry-Based Gene-Gene Dissimilarity Measures Utilizing Gene Ontology: Application In Gene Clustering". Gene. 679: 341–351. doi:10.1016/j.gene.2018.08.062. PMID 30184472.
Further reading
- Teng SC, Wu KJ, Tseng SF, et al. (2007). "Importin KPNA2, NBS1, DNA repair and tumorigenesis". J. Mol. Histol. 37 (5–7): 293–9. doi:10.1007/s10735-006-9032-y. PMID 16752129.
- Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
- Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
- Martinon F, Hofmann K, Tschopp J (2001). "The pyrin domain: a possible member of the death domain-fold family implicated in apoptosis and inflammation". Curr. Biol. 11 (4): R118–20. doi:10.1016/S0960-9822(01)00056-2. PMID 11250163.
- Wang L, Manji GA, Grenier JM, et al. (2002). "PYPAF7, a novel PYRIN-containing Apaf1-like protein that regulates activation of NF-kappa B and caspase-1-dependent cytokine processing". J. Biol. Chem. 277 (33): 29874–80. doi:10.1074/jbc.M203915200. PMID 12019269.
- Grenier JM, Wang L, Manji GA, et al. (2002). "Functional screening of five PYPAF family members identifies PYPAF5 as a novel regulator of NF-kappaB and caspase-1". FEBS Lett. 530 (1–3): 73–8. doi:10.1016/S0014-5793(02)03416-6. PMID 12387869.
- Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
- Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
- Agostini L, Martinon F, Burns K, et al. (2004). "NALP3 forms an IL-1beta-processing inflammasome with increased activity in Muckle-Wells autoinflammatory disorder". Immunity. 20 (3): 319–25. doi:10.1016/S1074-7613(04)00046-9. PMID 15030775.
- Bruey JM, Bruey-Sedano N, Newman R, et al. (2005). "PAN1/NALP2/PYPAF2, an inducible inflammatory mediator that regulates NF-kappaB and caspase-1 activation in macrophages". J. Biol. Chem. 279 (50): 51897–907. doi:10.1074/jbc.M406741200. PMID 15456791.
- Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
- Kinoshita T, Wang Y, Hasegawa M, et al. (2005). "PYPAF3, a PYRIN-containing APAF-1-like protein, is a feedback regulator of caspase-1-dependent interleukin-1beta secretion". J. Biol. Chem. 280 (23): 21720–5. doi:10.1074/jbc.M410057200. PMID 15817483.
- Rink L, Slupianek A, Stoklosa T, et al. (2007). "Enhanced phosphorylation of Nbs1, a member of DNA repair/checkpoint complex Mre11-RAD50-Nbs1, can be targeted to increase the efficacy of imatinib mesylate against BCR/ABL-positive leukemia cells". Blood. 110 (2): 651–60. doi:10.1182/blood-2006-08-042630. PMC 1924483. PMID 17431132.
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