CSDC2: Difference between revisions

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Latest revision as of 10:05, 30 August 2017

Cold shock domain-containing protein C2 is a protein that in humans is encoded by the CSDC2 gene.^[1]^[2]^[3]

References

↑ Castiglia D, Scaturro M, Nastasi T, Cestelli A, Di Liegro I (Mar 1996). "PIPPin, a putative RNA-binding protein specifically expressed in the rat brain". Biochem Biophys Res Commun. 218 (1): 390–4. doi:10.1006/bbrc.1996.0068. PMID 8573167.
↑ Raimondi L, D'Asaro M, Proia P, Nastasi T, Di Liegro I (May 2003). "RNA-binding ability of PIPPin requires the entire protein". J Cell Mol Med. 7 (1): 35–42. doi:10.1111/j.1582-4934.2003.tb00200.x. PMID 12767259.
↑ "Entrez Gene: CSDC2 cold shock domain containing C2, RNA binding".

External links

Human CSDC2 genome location and CSDC2 gene details page in the UCSC Genome Browser.

Andersson B, Wentland MA, Ricafrente JY, et al. (1996). "A "double adaptor" method for improved shotgun library construction". Anal. Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
Yu W, Andersson B, Worley KC, et al. (1997). "Large-scale concatenation cDNA sequencing". Genome Res. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
Nastasi T, Scaturro M, Bellafiore M, et al. (1999). "PIPPin is a brain-specific protein that contains a cold-shock domain and binds specifically to H1 degrees and H3.3 mRNAs". J. Biol. Chem. 274 (34): 24087–93. doi:10.1074/jbc.274.34.24087. PMID 10446180.
Dunham I, Shimizu N, Roe BA, et al. (1999). "The DNA sequence of human chromosome 22". Nature. 402 (6761): 489–95. doi:10.1038/990031. PMID 10591208.
Nastasi T, Muzi P, Beccari S, et al. (2001). "Specific neurons of brain cortex and cerebellum are PIPPin positive". NeuroReport. 11 (10): 2233–6. doi:10.1097/00001756-200007140-00034. PMID 10923677.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Schäfer C, Steffen H, Krzykowski KJ, et al. (2003). "CRHSP-24 phosphorylation is regulated by multiple signaling pathways in pancreatic acinar cells". Am. J. Physiol. Gastrointest. Liver Physiol. 285 (4): G726–34. doi:10.1152/ajpgi.00111.2003. PMID 12801884.
Collins JE, Wright CL, Edwards CA, et al. (2005). "A genome annotation-driven approach to cloning the human ORFeome". Genome Biol. 5 (10): R84. doi:10.1186/gb-2004-5-10-r84. PMC 545604. PMID 15461802.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.

This article on a gene on human chromosome 22 is a stub. You can help Wikipedia by expanding it.

[pmid8573167-1] Castiglia D, Scaturro M, Nastasi T, Cestelli A, Di Liegro I (Mar 1996). "PIPPin, a putative RNA-binding protein specifically expressed in the rat brain". Biochem Biophys Res Commun. 218 (1): 390–4. doi:10.1006/bbrc.1996.0068. PMID 8573167.

[pmid12767259-2] Raimondi L, D'Asaro M, Proia P, Nastasi T, Di Liegro I (May 2003). "RNA-binding ability of PIPPin requires the entire protein". J Cell Mol Med. 7 (1): 35–42. doi:10.1111/j.1582-4934.2003.tb00200.x. PMID 12767259.

[entrez-3] "Entrez Gene: CSDC2 cold shock domain containing C2, RNA binding".

[1]

[2]

[3]

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+{{Infobox_gene}}
-{{GNF_Protein_box
+'''Cold shock domain-containing protein C2''' is a [[protein]] that in humans is encoded by the ''CSDC2'' [[gene]].<ref name="pmid8573167">{{cite journal | vauthors = Castiglia D, Scaturro M, Nastasi T, Cestelli A, Di Liegro I | title = PIPPin, a putative RNA-binding protein specifically expressed in the rat brain | journal = Biochem Biophys Res Commun | volume = 218 | issue = 1 | pages = 390–4 |date=Mar 1996 | pmid = 8573167 | pmc =  | doi = 10.1006/bbrc.1996.0068 }}</ref><ref name="pmid12767259">{{cite journal | vauthors = Raimondi L, D'Asaro M, Proia P, Nastasi T, Di Liegro I | title = RNA-binding ability of PIPPin requires the entire protein | journal = J Cell Mol Med | volume = 7 | issue = 1 | pages = 35–42 |date=May 2003 | pmid = 12767259 | pmc =  | doi =10.1111/j.1582-4934.2003.tb00200.x  }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: CSDC2 cold shock domain containing C2, RNA binding| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=27254| accessdate = }}</ref>
- | image =
- | image_source =
- | PDB =
- | Name = Cold shock domain containing C2, RNA binding
- | HGNCid = 30359
- | Symbol = CSDC2
- | AltSymbols =; PIPPIN; dJ347H13.2
- | OMIM =
- | ECnumber =
- | Homologene = 8701
- | MGIid = 2146027
- | GeneAtlas_image1 = PBB_GE_CSDC2_209981_at_tn.png
- | Function = {{GNF_GO|id=GO:0003677 |text = DNA binding}} {{GNF_GO|id=GO:0003723 |text = RNA binding}}
- | Component = {{GNF_GO|id=GO:0005634 |text = nucleus}} {{GNF_GO|id=GO:0005737 |text = cytoplasm}}
-  | Process = {{GNF_GO|id=GO:0006355 |text = regulation of transcription, DNA-dependent}} {{GNF_GO|id=GO:0006397 |text = mRNA processing}} {{GNF_GO|id=GO:0006398 |text = histone mRNA 3'-end processing}}
- | Orthologs = {{GNF_Ortholog_box
-    | Hs_EntrezGene = 27254
-    | Hs_Ensembl = ENSG00000172346
-    | Hs_RefseqProtein = NP_055275
-    | Hs_RefseqmRNA = NM_014460
-    | Hs_GenLoc_db =
-    | Hs_GenLoc_chr = 22
-    | Hs_GenLoc_start = 40286997
-    | Hs_GenLoc_end = 40302610
-    | Hs_Uniprot = Q9Y534
-    | Mm_EntrezGene = 105859
-    | Mm_Ensembl = ENSMUSG00000042109
-    | Mm_RefseqmRNA = NM_145473
-    | Mm_RefseqProtein = NP_663448
-    | Mm_GenLoc_db =
-    | Mm_GenLoc_chr = 15
-    | Mm_GenLoc_start = 81764150
-    | Mm_GenLoc_end = 81778183
-    | Mm_Uniprot = Q3V1F0
-  }}
-}}
-'''Cold shock domain containing C2, RNA binding''', also known as '''CSDC2''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: CSDC2 cold shock domain containing C2, RNA binding| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=27254| accessdate = }}</ref>
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@@ Line 55: / Line 11: @@
 ==References==
-{{reflist|2}}
+{{reflist}}
+==External links==
+* {{UCSC gene info|CSDC2}}
 ==Further reading==
 {{refbegin | 2}}
 {{PBB_Further_reading
 | citations =
-*{{cite journal  | author=Castiglia D, Scaturro M, Nastasi T, ''et al.'' |title=PIPPin, a putative RNA-binding protein specifically expressed in the rat brain. |journal=Biochem. Biophys. Res. Commun. |volume=218 |issue= 1 |pages= 390-4 |year= 1996 |pmid= 8573167 |doi= 10.1006/bbrc.1996.0068 }}
+*{{cite journal  | vauthors=Andersson B, Wentland MA, Ricafrente JY |title=A "double adaptor" method for improved shotgun library construction. |journal=Anal. Biochem. |volume=236 |issue= 1 |pages= 107–13 |year= 1996 |pmid= 8619474 |doi= 10.1006/abio.1996.0138 |display-authors=etal}}
-*{{cite journal  | author=Andersson B, Wentland MA, Ricafrente JY, ''et al.'' |title=A "double adaptor" method for improved shotgun library construction. |journal=Anal. Biochem. |volume=236 |issue= 1 |pages= 107-13 |year= 1996 |pmid= 8619474 |doi= 10.1006/abio.1996.0138 }}
+*{{cite journal  | vauthors=Yu W, Andersson B, Worley KC |title=Large-scale concatenation cDNA sequencing. |journal=Genome Res. |volume=7 |issue= 4 |pages= 353–8 |year= 1997 |pmid= 9110174 |doi=  10.1101/gr.7.4.353| pmc=139146  |display-authors=etal}}
-*{{cite journal  | author=Yu W, Andersson B, Worley KC, ''et al.'' |title=Large-scale concatenation cDNA sequencing. |journal=Genome Res. |volume=7 |issue= 4 |pages= 353-8 |year= 1997 |pmid= 9110174 |doi=  }}
+*{{cite journal  | vauthors=Nastasi T, Scaturro M, Bellafiore M |title=PIPPin is a brain-specific protein that contains a cold-shock domain and binds specifically to H1 degrees and H3.3 mRNAs. |journal=J. Biol. Chem. |volume=274 |issue= 34 |pages= 24087–93 |year= 1999 |pmid= 10446180 |doi=10.1074/jbc.274.34.24087  |display-authors=etal}}
-*{{cite journal  | author=Nastasi T, Scaturro M, Bellafiore M, ''et al.'' |title=PIPPin is a brain-specific protein that contains a cold-shock domain and binds specifically to H1 degrees and H3.3 mRNAs. |journal=J. Biol. Chem. |volume=274 |issue= 34 |pages= 24087-93 |year= 1999 |pmid= 10446180 |doi=  }}
+*{{cite journal  | vauthors=Dunham I, Shimizu N, Roe BA |title=The DNA sequence of human chromosome 22. |journal=Nature |volume=402 |issue= 6761 |pages= 489–95 |year= 1999 |pmid= 10591208 |doi= 10.1038/990031 |display-authors=etal}}
-*{{cite journal  | author=Dunham I, Shimizu N, Roe BA, ''et al.'' |title=The DNA sequence of human chromosome 22. |journal=Nature |volume=402 |issue= 6761 |pages= 489-95 |year= 1999 |pmid= 10591208 |doi= 10.1038/990031 }}
+*{{cite journal  | vauthors=Nastasi T, Muzi P, Beccari S |title=Specific neurons of brain cortex and cerebellum are PIPPin positive. |journal=NeuroReport |volume=11 |issue= 10 |pages= 2233–6 |year= 2001 |pmid= 10923677 |doi=10.1097/00001756-200007140-00034  |display-authors=etal}}
-*{{cite journal  | author=Nastasi T, Muzi P, Beccari S, ''et al.'' |title=Specific neurons of brain cortex and cerebellum are PIPPin positive. |journal=Neuroreport |volume=11 |issue= 10 |pages= 2233-6 |year= 2001 |pmid= 10923677 |doi=  }}
+*{{cite journal  | vauthors=Strausberg RL, Feingold EA, Grouse LH |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 |display-authors=etal}}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
+*{{cite journal  | vauthors=Schäfer C, Steffen H, Krzykowski KJ |title=CRHSP-24 phosphorylation is regulated by multiple signaling pathways in pancreatic acinar cells. |journal=Am. J. Physiol. Gastrointest. Liver Physiol. |volume=285 |issue= 4 |pages= G726–34 |year= 2003 |pmid= 12801884 |doi= 10.1152/ajpgi.00111.2003 |display-authors=etal}}
-*{{cite journal  | author=Raimondi L, D'Asaro M, Proia P, ''et al.'' |title=RNA-binding ability of PIPPin requires the entire protein. |journal=J. Cell. Mol. Med. |volume=7 |issue= 1 |pages= 35-42 |year= 2003 |pmid= 12767259 |doi=  }}
+*{{cite journal  | vauthors=Collins JE, Wright CL, Edwards CA |title=A genome annotation-driven approach to cloning the human ORFeome. |journal=Genome Biol. |volume=5 |issue= 10 |pages= R84 |year= 2005 |pmid= 15461802 |doi= 10.1186/gb-2004-5-10-r84  | pmc=545604 |display-authors=etal}}
-*{{cite journal  | author=Schäfer C, Steffen H, Krzykowski KJ, ''et al.'' |title=CRHSP-24 phosphorylation is regulated by multiple signaling pathways in pancreatic acinar cells. |journal=Am. J. Physiol. Gastrointest. Liver Physiol. |volume=285 |issue= 4 |pages= G726-34 |year= 2003 |pmid= 12801884 |doi= 10.1152/ajpgi.00111.2003 }}
+*{{cite journal  | vauthors=Gerhard DS, Wagner L, Feingold EA |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504  | pmc=528928 |display-authors=etal}}
-*{{cite journal  | author=Collins JE, Wright CL, Edwards CA, ''et al.'' |title=A genome annotation-driven approach to cloning the human ORFeome. |journal=Genome Biol. |volume=5 |issue= 10 |pages= R84 |year= 2005 |pmid= 15461802 |doi= 10.1186/gb-2004-5-10-r84 }}
+*{{cite journal  | vauthors=Kimura K, Wakamatsu A, Suzuki Y |title=Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. |journal=Genome Res. |volume=16 |issue= 1 |pages= 55–65 |year= 2006 |pmid= 16344560 |doi= 10.1101/gr.4039406  | pmc=1356129 |display-authors=etal}}
-*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
-*{{cite journal  | author=Kimura K, Wakamatsu A, Suzuki Y, ''et al.'' |title=Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. |journal=Genome Res. |volume=16 |issue= 1 |pages= 55-65 |year= 2006 |pmid= 16344560 |doi= 10.1101/gr.4039406 }}
 }}
 {{refend}}
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 {{gene-22-stub}}
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CSDC2: Difference between revisions

Latest revision as of 10:05, 30 August 2017

References

External links

Further reading

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