Alpha 1-antitrypsin deficiency pathophysiology: Difference between revisions
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*The [[Proteases|protease]]-antiprotease imbalance in the [[lung]] has a major effect. In Z-variant of [[alpha1 antitrypsin]] deficiency, there is less [[alpha1 antitrypsin]] in the lung. The [[alpha1 antitrypsin]] that is present is 5 times less effective than normal [[alpha1 antitrypsin]]. The residual [[alpha1 antitrypsin]] is susceptible to inactivation by oxidation of the P1 methionine residue by free radicals from leukocytes or direct oxidation by cigarette smoke. The Z [[alpha1 antitrypsin]] also favors the formation of polymers in the lung. Z [[alpha1 antitrypsin]]-deficient patients have excess [[neutrophils]] in lavage fluid and in tissue sections of the lung possibly related to the [[chemoattractant]] effect of an excess of [[Leukotriene B4|leukotriene B4 (LTB4]]) and [[IL-8|interleukin (IL)-8]] and the [[polymers]] themselves. These circumstances of unopposed [[proteolytic]] [[enzyme activity]] and an increase in [[inflammatory]] conditions cause the trademark [[emphysema]] of this disease. | *The [[Proteases|protease]]-antiprotease imbalance in the [[lung]] has a major effect. In Z-variant of [[alpha1 antitrypsin]] deficiency, there is less [[alpha1 antitrypsin]] in the lung. The [[alpha1 antitrypsin]] that is present is 5 times less effective than normal [[alpha1 antitrypsin]]. The residual [[alpha1 antitrypsin]] is susceptible to inactivation by oxidation of the P1 methionine residue by free radicals from leukocytes or direct oxidation by cigarette smoke. The Z [[alpha1 antitrypsin]] also favors the formation of polymers in the lung. Z [[alpha1 antitrypsin]]-deficient patients have excess [[neutrophils]] in lavage fluid and in tissue sections of the lung possibly related to the [[chemoattractant]] effect of an excess of [[Leukotriene B4|leukotriene B4 (LTB4]]) and [[IL-8|interleukin (IL)-8]] and the [[polymers]] themselves. These circumstances of unopposed [[proteolytic]] [[enzyme activity]] and an increase in [[inflammatory]] conditions cause the trademark [[emphysema]] of this disease. | ||
===Genetics=== | ===Genetics=== | ||
Alpha1-antitrypsin deficiency (AATD) is inherited in an autosomally-codominant pattern caused by mutations in the ''SERPINA1'' gene.The alpha-1 AT gene | *Alpha1-antitrypsin deficiency (AATD) is inherited in an autosomally-codominant pattern caused by mutations in the ''SERPINA1'' gene. | ||
*Normal blood levels of alpha-1 antitrypsin are 1.5-3.5 [[gram|gm]]/[[litre|l]]. | |||
*The alpha-1 AT gene is located on the long arm of chromosome 14 (gene locus:14q32.1). The SERPINA1 gene has six introns, seven axons and 12.2kb in length. There have been 120 different alleles for alpha-1 AT variants that have been described, but only 10-15 are associated with severe alpha-1 deficiency. | |||
*Each allele has been given a letter code based upon electrophoretic mobility that varies according to protein charge from amino acid alterations on gel electrophoresis that is used to identify the PI phenotype. | |||
*SERPINA1 gene mutation alters the configuration of the alpha1-antitrypsin molecule and prevents its release from hepatocytes. By far, the most common severe deficient variant is the Z allele, which is produced by substitution of a lysine for glutamate at position 342 of the molecule. This accounts for 95% of the clinically recognized cases of severe alpha-1 AT deficiency. The 75 alleles can basically be divided into four groups: | |||
* Normal – M alleles (normal phenotype is MM), found in 90% of the U.S. population, patients have normal lung function. | * Normal – M alleles (normal phenotype is MM), found in 90% of the U.S. population, patients have normal lung function. | ||
* Deficient – Z allele (carried by 2-3% of the U.S. Caucasian population), have plasma levels of alpha-1 AT that is < 35% of normal. | * Deficient – Z allele (carried by 2-3% of the U.S. Caucasian population), have plasma levels of alpha-1 AT that is < 35% of normal. | ||
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Differences in speed of migration of different protein variants on gel electrophoresis have been used to identify the PI phenotype, and these differences in migration relate to variations in protein charge resulting from amino acid alterations (Fig. 1).43 The M allele results in a protein with a medium rate of migration; the Z form of the protein has the slowest rate of migration. Some individuals inherit null alleles that result in protein levels that are not detectable. Individuals with a Z pattern on serum isoelectric focusing are referred to as phenotype PIZ (encompassing both PIZZ and PIZnull genotype variants). The S variant occurs at a frequency of 0.02–0.03 and is associated with mild reductions in serum AAT levels. The Z variant is associated with a severe reduction in serum AAT levels. The most common alleles are the M variants with allele frequencies of greater than 0.95 and normal AAT levels | Differences in speed of migration of different protein variants on gel electrophoresis have been used to identify the PI phenotype, and these differences in migration relate to variations in protein charge resulting from amino acid alterations (Fig. 1).43 The M allele results in a protein with a medium rate of migration; the Z form of the protein has the slowest rate of migration. Some individuals inherit null alleles that result in protein levels that are not detectable. Individuals with a Z pattern on serum isoelectric focusing are referred to as phenotype PIZ (encompassing both PIZZ and PIZnull genotype variants). The S variant occurs at a frequency of 0.02–0.03 and is associated with mild reductions in serum AAT levels. The Z variant is associated with a severe reduction in serum AAT levels. The most common alleles are the M variants with allele frequencies of greater than 0.95 and normal AAT levels | ||
===Molecular Biology=== | ===Molecular Biology=== | ||
Revision as of 15:02, 27 November 2017
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Alpha 1-antitrypsin deficiency Microchapters |
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Editor-In-Chief: C. Michael Gibson, M.S., M.D. [1]; Associate Editor(s)-in-Chief: Mazia Fatima, MBBS [2]Cafer Zorkun, M.D., Ph.D. [3]
Overview
Pathophysiology
- Alpha 1-antitrypsin (A1AT) is synthesized and secreted mainly by hepatocytes. However, other sources of the enzyme include macrophages and bronchial epithelial cells.
- Alpha1-antitrypsin enzyme is a member of the serine protease inhibitor (serpin) family of proteins. Functions of alpha1-antitrypsin include inhibition of pancreatic trypsin, and other proteinases including neutrophil elastase, cathepsin G and proteinase 3. Alpha 1-antitrypsin (A1AT) protects the lungs from proteases like the neutrophil elastase enzyme.
- Genetic mutation in the SERPINA1 gene results in decreased levels of alveolar alpha1 antitrypsin. Proteases accumulate in the alveoli causing a destruction of alveolar walls and resultant emphysema. Excess alpha1-antitrypsin in hepatocytes results in chronic liver disease.
- The Z mutation results in a conformational change in the alpha 1 antitrypsin molecule. The β sheet opens leaving it susceptible to interaction with another alpha 1 antitrypsin molecules to form a dimer or a polymer. These polymers get trapped in the endoplasmic reticulum.The Z mutation causes most of the unstable protein to form polymers.
- Smoking is an important risk factor in the development of the lung disease associated with alpha 1 antitrypsin deficiency. The protease-antiprotease imbalance in the lung has major consequences, in addition to increasing the inflammatory reaction in the airways, cigarette smoke directly inactivates alpha 1-antitrypsin by oxidizing essential methionine residues to sulfoxide forms, decreasing the enzyme activity by a rate of 2000.
- The protease-antiprotease imbalance in the lung has a major effect. In Z-variant of alpha1 antitrypsin deficiency, there is less alpha1 antitrypsin in the lung. The alpha1 antitrypsin that is present is 5 times less effective than normal alpha1 antitrypsin. The residual alpha1 antitrypsin is susceptible to inactivation by oxidation of the P1 methionine residue by free radicals from leukocytes or direct oxidation by cigarette smoke. The Z alpha1 antitrypsin also favors the formation of polymers in the lung. Z alpha1 antitrypsin-deficient patients have excess neutrophils in lavage fluid and in tissue sections of the lung possibly related to the chemoattractant effect of an excess of leukotriene B4 (LTB4) and interleukin (IL)-8 and the polymers themselves. These circumstances of unopposed proteolytic enzyme activity and an increase in inflammatory conditions cause the trademark emphysema of this disease.
Genetics
- Alpha1-antitrypsin deficiency (AATD) is inherited in an autosomally-codominant pattern caused by mutations in the SERPINA1 gene.
- Normal blood levels of alpha-1 antitrypsin are 1.5-3.5 gm/l.
- The alpha-1 AT gene is located on the long arm of chromosome 14 (gene locus:14q32.1). The SERPINA1 gene has six introns, seven axons and 12.2kb in length. There have been 120 different alleles for alpha-1 AT variants that have been described, but only 10-15 are associated with severe alpha-1 deficiency.
- Each allele has been given a letter code based upon electrophoretic mobility that varies according to protein charge from amino acid alterations on gel electrophoresis that is used to identify the PI phenotype.
- SERPINA1 gene mutation alters the configuration of the alpha1-antitrypsin molecule and prevents its release from hepatocytes. By far, the most common severe deficient variant is the Z allele, which is produced by substitution of a lysine for glutamate at position 342 of the molecule. This accounts for 95% of the clinically recognized cases of severe alpha-1 AT deficiency. The 75 alleles can basically be divided into four groups:
- Normal – M alleles (normal phenotype is MM), found in 90% of the U.S. population, patients have normal lung function.
- Deficient – Z allele (carried by 2-3% of the U.S. Caucasian population), have plasma levels of alpha-1 AT that is < 35% of normal.
- Null – No detectable alpha-1 AT. Least common and most severe form of the disease.
- Dysfunctional – Patients have a normal alpha-1 AT level, but the enzyme does not function properly.
In individuals with PiSS, PiMZ and PiSZ phenotypes, blood levels of A1AT are reduced to between 40 and 60 % of normal levels. This is sufficient to protect the lungs from the effects of elastase in people who do not smoke. However, in individuals with the PiZZ phenotype, A1AT levels are less than 15 % of normal, and patients are likely to develop emphysema at a young age; 50 % of these patients will develop liver cirrhosis, because the A1AT is not secreted properly and instead accumulates in the liver. A liver biopsy in such cases will reveal Periodic acid-Shiff (PAS)-positive, diastase-negative granules.
Differences in speed of migration of different protein variants on gel electrophoresis have been used to identify the PI phenotype, and these differences in migration relate to variations in protein charge resulting from amino acid alterations (Fig. 1).43 The M allele results in a protein with a medium rate of migration; the Z form of the protein has the slowest rate of migration. Some individuals inherit null alleles that result in protein levels that are not detectable. Individuals with a Z pattern on serum isoelectric focusing are referred to as phenotype PIZ (encompassing both PIZZ and PIZnull genotype variants). The S variant occurs at a frequency of 0.02–0.03 and is associated with mild reductions in serum AAT levels. The Z variant is associated with a severe reduction in serum AAT levels. The most common alleles are the M variants with allele frequencies of greater than 0.95 and normal AAT levels
Molecular Biology
- Crystal structure of alpha1-antitrypsin enzyme is composed of three β sheets (A, B, C) and an exposed mobile reactive loop with a peptide sequence as a pseudosubstrate for the target proteinase enzyme. This loop consists of amino acids within this loop are the PI–PI′ residues, methionine serine, as these are binding sites for neutrophil elastase.
- The Alpha-1 antitrypsin deficiency molecule is an acute phase glycoprotein.
- Alpha-1 AT is the protease inhibitor in highest concentration in human plasma.Its functions include inhibition of trypsin and neutrophil elastase. Alpha-1 antitrypsin is a part of serpin class of serine protease inhibitors characterized by their unique ability to undergo a conformational change. Other members of the serpin class of protease inhibitors include antithrombin, C1-inhibitor, and the many inhibitors of plasminogen. An advantage of this molecular mobility is that it enables the inhibitor to trap its target protease form a complex that can remain stable for hours. A potential disadvantage, however, is that it makes the serpins more than usually vulnerable to dysfunctional mutations.
Associated Conditions
α1-antitrypsin deficiency has been associated with a number of diseases:
- COPD
- Asthma
- Wegener's granulomatosis
- Pancreatitis
- Gallstones
- Bronchiectasis (possibly)
- Prolapse[4]
- Primary sclerosing cholangitis
- Autoimmune hepatitis
- Emphysema
- Cancer