SH3GLB1: Difference between revisions

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{{Infobox_gene}}
{{PBB_Controls
'''Endophilin-B1''' is a [[protein]] that in humans is encoded by the ''SH3GLB1'' [[gene]].<ref name="pmid11161816">{{cite journal | vauthors = Pierrat B, Simonen M, Cueto M, Mestan J, Ferrigno P, Heim J | title = SH3GLB, a new endophilin-related protein family featuring an SH3 domain | journal = Genomics | volume = 71 | issue = 2 | pages = 222–34 | date = February 2001 | pmid = 11161816 | pmc =  | doi = 10.1006/geno.2000.6378 }}</ref><ref name="pmid11259440">{{cite journal | vauthors = Cuddeback SM, Yamaguchi H, Komatsu K, Miyashita T, Yamada M, Wu C, Singh S, Wang HG | title = Molecular cloning and characterization of Bif-1. A novel Src homology 3 domain-containing protein that associates with Bax | journal = J Biol Chem | volume = 276 | issue = 23 | pages = 20559–65 | date = June 2001 | pmid = 11259440 | pmc =  | doi = 10.1074/jbc.M101527200 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: SH3GLB1 SH3-domain GRB2-like endophilin B1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=51100| accessdate = }}</ref>
| update_page = yes
| require_manual_inspection = no
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}


<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
== Interactions ==
{{GNF_Protein_box
| image = PBB_Protein_SH3GLB1_image.jpg
| image_source = [[Protein_Data_Bank|PDB]] rendering based on 1x43.
| PDB = {{PDB2|1x43}}
| Name = SH3-domain GRB2-like endophilin B1
| HGNCid = 10833
| Symbol = SH3GLB1
| AltSymbols =; Bif-1; CGI-61; KIAA0491; dJ612B15.2
| OMIM = 609287
| ECnumber = 
| Homologene = 9337
| MGIid = 1859730
| GeneAtlas_image1 = PBB_GE_SH3GLB1_209091_s_at_tn.png
| GeneAtlas_image2 = PBB_GE_SH3GLB1_210101_x_at_tn.png
| GeneAtlas_image3 = PBB_GE_SH3GLB1_209090_s_at_tn.png
| Function = {{GNF_GO|id=GO:0005515 |text = protein binding}} {{GNF_GO|id=GO:0008289 |text = lipid binding}} {{GNF_GO|id=GO:0008415 |text = acyltransferase activity}} {{GNF_GO|id=GO:0016740 |text = transferase activity}}
| Component = {{GNF_GO|id=GO:0005737 |text = cytoplasm}}
| Process = {{GNF_GO|id=GO:0006915 |text = apoptosis}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 51100
    | Hs_Ensembl = ENSG00000097033
    | Hs_RefseqProtein = NP_057093
    | Hs_RefseqmRNA = NM_016009
    | Hs_GenLoc_db = 
    | Hs_GenLoc_chr = 1
    | Hs_GenLoc_start = 86942892
    | Hs_GenLoc_end = 86986451
    | Hs_Uniprot = Q9Y371
    | Mm_EntrezGene = 54673
    | Mm_Ensembl = ENSMUSG00000037062
    | Mm_RefseqmRNA = XM_977850
    | Mm_RefseqProtein = XP_982944
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 3
    | Mm_GenLoc_start = 144626230
    | Mm_GenLoc_end = 144657709
    | Mm_Uniprot = Q3TYR7
  }}
}}
'''SH3-domain GRB2-like endophilin B1''', also known as '''SH3GLB1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: SH3GLB1 SH3-domain GRB2-like endophilin B1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=51100| accessdate = }}</ref>


<!-- The PBB_Summary template is automatically maintained by Protein Box Bot. See Template:PBB_Controls to Stop updates. -->
SH3GLB1 has been shown to [[Protein-protein interaction|interact]] with [[SH3GLB2]]<ref name=pmid11161816 /> and [[Bcl-2-associated X protein]].<ref name=pmid11161816/><ref name=pmid11259440 />
{{PBB_Summary
| section_title =  
| summary_text =
}}


==References==
== References ==
{{reflist|2}}
{{reflist}}
==Further reading==
 
== Further reading ==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading
* {{cite journal | vauthors = Maruyama K, Sugano S | title = Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. | journal = Gene | volume = 138 | issue = 1–2 | pages = 171–4 | year = 1994 | pmid = 8125298 | doi = 10.1016/0378-1119(94)90802-8 }}
| citations =
* {{cite journal | vauthors = Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S | title = Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library | journal = Gene | volume = 200 | issue = 1–2 | pages = 149–56 | year = 1997 | pmid = 9373149 | doi = 10.1016/S0378-1119(97)00411-3 }}
*{{cite journal | author=Maruyama K, Sugano S |title=Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. |journal=Gene |volume=138 |issue= 1-2 |pages= 171-4 |year= 1994 |pmid= 8125298 |doi= }}
* {{cite journal | vauthors = Seki N, Ohira M, Nagase T, Ishikawa K, Miyajima N, Nakajima D, Nomura N, Ohara O | title = Characterization of cDNA clones in size-fractionated cDNA libraries from human brain | journal = DNA Res. | volume = 4 | issue = 5 | pages = 345–9 | year = 1998 | pmid = 9455484 | doi = 10.1093/dnares/4.5.345 }}
*{{cite journal | author=Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, ''et al.'' |title=Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library. |journal=Gene |volume=200 |issue= 1-2 |pages= 149-56 |year= 1997 |pmid= 9373149 |doi= }}
* {{cite journal | vauthors = Howard L, Nelson KK, Maciewicz RA, Blobel CP | title = Interaction of the metalloprotease disintegrins MDC9 and MDC15 with two SH3 domain-containing proteins, endophilin I and SH3PX1 | journal = J. Biol. Chem. | volume = 274 | issue = 44 | pages = 31693–9 | year = 1999 | pmid = 10531379 | doi = 10.1074/jbc.274.44.31693 }}
*{{cite journal | author=Seki N, Ohira M, Nagase T, ''et al.'' |title=Characterization of cDNA clones in size-fractionated cDNA libraries from human brain. |journal=DNA Res. |volume=4 |issue= 5 |pages= 345-9 |year= 1998 |pmid= 9455484 |doi= }}
* {{cite journal | vauthors = Lai CH, Chou CY, Ch'ang LY, Liu CS, Lin W | title = Identification of Novel Human Genes Evolutionarily Conserved in Caenorhabditis elegans by Comparative Proteomics | journal = Genome Res. | volume = 10 | issue = 5 | pages = 703–13 | year = 2000 | pmid = 10810093 | pmc = 310876 | doi = 10.1101/gr.10.5.703 }}
*{{cite journal | author=Howard L, Nelson KK, Maciewicz RA, Blobel CP |title=Interaction of the metalloprotease disintegrins MDC9 and MDC15 with two SH3 domain-containing proteins, endophilin I and SH3PX1. |journal=J. Biol. Chem. |volume=274 |issue= 44 |pages= 31693-9 |year= 1999 |pmid= 10531379 |doi= }}
* {{cite journal | vauthors = Modregger J, Schmidt AA, Ritter B, Huttner WB, Plomann M | title = Characterization of Endophilin B1b, a brain-specific membrane-associated lysophosphatidic acid acyl transferase with properties distinct from endophilin A1 | journal = J. Biol. Chem. | volume = 278 | issue = 6 | pages = 4160–7 | year = 2003 | pmid = 12456676 | doi = 10.1074/jbc.M208568200 }}
*{{cite journal | author=Lai CH, Chou CY, Ch'ang LY, ''et al.'' |title=Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics. |journal=Genome Res. |volume=10 |issue= 5 |pages= 703-13 |year= 2000 |pmid= 10810093 |doi=  }}
* {{cite journal | vauthors = Lee SY, Wenk MR, Kim Y, Nairn AC, De Camilli P | title = Regulation of synaptojanin 1 by cyclin-dependent kinase 5 at synapses | journal = Proc. Natl. Acad. Sci. U.S.A. | volume = 101 | issue = 2 | pages = 546–51 | year = 2004 | pmid = 14704270 | pmc = 327184 | doi = 10.1073/pnas.0307813100 }}
*{{cite journal  | author=Pierrat B, Simonen M, Cueto M, ''et al.'' |title=SH3GLB, a new endophilin-related protein family featuring an SH3 domain. |journal=Genomics |volume=71 |issue= 2 |pages= 222-34 |year= 2001 |pmid= 11161816 |doi= 10.1006/geno.2000.6378 }}
* {{cite journal | vauthors = Karbowski M, Jeong SY, Youle RJ | title = Endophilin B1 is required for the maintenance of mitochondrial morphology | journal = J. Cell Biol. | volume = 166 | issue = 7 | pages = 1027–39 | year = 2004 | pmid = 15452144 | pmc = 2172012 | doi = 10.1083/jcb.200407046 }}
*{{cite journal  | author=Cuddeback SM, Yamaguchi H, Komatsu K, ''et al.'' |title=Molecular cloning and characterization of Bif-1. A novel Src homology 3 domain-containing protein that associates with Bax. |journal=J. Biol. Chem. |volume=276 |issue= 23 |pages= 20559-65 |year= 2001 |pmid= 11259440 |doi= 10.1074/jbc.M101527200 }}
* {{cite journal | vauthors = Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M | title = Towards a proteome-scale map of the human protein-protein interaction network | journal = Nature | volume = 437 | issue = 7062 | pages = 1173–8 | year = 2005 | pmid = 16189514 | doi = 10.1038/nature04209 }}
*{{cite journal | author=Modregger J, Schmidt AA, Ritter B, ''et al.'' |title=Characterization of Endophilin B1b, a brain-specific membrane-associated lysophosphatidic acid acyl transferase with properties distinct from endophilin A1. |journal=J. Biol. Chem. |volume=278 |issue= 6 |pages= 4160-7 |year= 2003 |pmid= 12456676 |doi= 10.1074/jbc.M208568200 }}
* {{cite journal | vauthors = Takahashi Y, Karbowski M, Yamaguchi H, Kazi A, Wu J, Sebti SM, Youle RJ, Wang HG | title = Loss of Bif-1 Suppresses Bax/Bak Conformational Change and Mitochondrial Apoptosis | journal = Mol. Cell. Biol. | volume = 25 | issue = 21 | pages = 9369–82 | year = 2005 | pmid = 16227588 | pmc = 1265816 | doi = 10.1128/MCB.25.21.9369-9382.2005 }}
*{{cite journal | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
* {{cite journal | vauthors = Masuda M, Takeda S, Sone M, Ohki T, Mori H, Kamioka Y, Mochizuki N | title = Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms | journal = EMBO J. | volume = 25 | issue = 12 | pages = 2889–97 | year = 2006 | pmid = 16763557 | pmc = 1500852 | doi = 10.1038/sj.emboj.7601176 }}
*{{cite journal  | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
* {{cite journal | vauthors = Lee JW, Jeong EG, Soung YH, Nam SW, Lee JY, Yoo NJ, Lee SH | title = Decreased expression of tumour suppressor Bax-interacting factor-1 (Bif-1), a Bax activator, in gastric carcinomas | journal = Pathology | volume = 38 | issue = 4 | pages = 312–5 | year = 2006 | pmid = 16916719 | doi = 10.1080/00313020600820880 }}
*{{cite journal  | author=Lee SY, Wenk MR, Kim Y, ''et al.'' |title=Regulation of synaptojanin 1 by cyclin-dependent kinase 5 at synapses. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 2 |pages= 546-51 |year= 2004 |pmid= 14704270 |doi= 10.1073/pnas.0307813100 }}
*{{cite journal | author=Karbowski M, Jeong SY, Youle RJ |title=Endophilin B1 is required for the maintenance of mitochondrial morphology. |journal=J. Cell Biol. |volume=166 |issue= 7 |pages= 1027-39 |year= 2004 |pmid= 15452144 |doi= 10.1083/jcb.200407046 }}
*{{cite journal | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{cite journal  | author=Rual JF, Venkatesan K, Hao T, ''et al.'' |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173-8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
*{{cite journal | author=Takahashi Y, Karbowski M, Yamaguchi H, ''et al.'' |title=Loss of Bif-1 suppresses Bax/Bak conformational change and mitochondrial apoptosis. |journal=Mol. Cell. Biol. |volume=25 |issue= 21 |pages= 9369-82 |year= 2005 |pmid= 16227588 |doi= 10.1128/MCB.25.21.9369-9382.2005 }}
*{{cite journal | author=Gregory SG, Barlow KF, McLay KE, ''et al.'' |title=The DNA sequence and biological annotation of human chromosome 1. |journal=Nature |volume=441 |issue= 7091 |pages= 315-21 |year= 2006 |pmid= 16710414 |doi= 10.1038/nature04727 }}
*{{cite journal  | author=Masuda M, Takeda S, Sone M, ''et al.'' |title=Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms. |journal=EMBO J. |volume=25 |issue= 12 |pages= 2889-97 |year= 2006 |pmid= 16763557 |doi= 10.1038/sj.emboj.7601176 }}
*{{cite journal | author=Lee JW, Jeong EG, Soung YH, ''et al.'' |title=Decreased expression of tumour suppressor Bax-interacting factor-1 (Bif-1), a Bax activator, in gastric carcinomas. |journal=Pathology |volume=38 |issue= 4 |pages= 312-5 |year= 2006 |pmid= 16916719 |doi= 10.1080/00313020600820880 }}
}}
{{refend}}
{{refend}}


{{protein-stub}}
{{PDB Gallery|geneid=51100}}
{{WikiDoc Sources}}
 
 
{{gene-1-stub}}

Latest revision as of 06:17, 11 September 2017

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Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez

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Ensembl

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UniProt

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RefSeq (mRNA)

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RefSeq (protein)

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Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Endophilin-B1 is a protein that in humans is encoded by the SH3GLB1 gene.[1][2][3]

Interactions

SH3GLB1 has been shown to interact with SH3GLB2[1] and Bcl-2-associated X protein.[1][2]

References

  1. ↑ 1.0 1.1 1.2 Pierrat B, Simonen M, Cueto M, Mestan J, Ferrigno P, Heim J (February 2001). "SH3GLB, a new endophilin-related protein family featuring an SH3 domain". Genomics. 71 (2): 222–34. doi:10.1006/geno.2000.6378. PMID 11161816.
  2. ↑ 2.0 2.1 Cuddeback SM, Yamaguchi H, Komatsu K, Miyashita T, Yamada M, Wu C, Singh S, Wang HG (June 2001). "Molecular cloning and characterization of Bif-1. A novel Src homology 3 domain-containing protein that associates with Bax". J Biol Chem. 276 (23): 20559–65. doi:10.1074/jbc.M101527200. PMID 11259440.
  3. ↑ "Entrez Gene: SH3GLB1 SH3-domain GRB2-like endophilin B1".

Further reading


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