NIF3L1: Difference between revisions

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{{Infobox_gene}}
{{PBB_Controls
'''NIF3-like protein 1''' is a [[protein]] that in humans is encoded by the ''NIF3L1'' [[gene]].<ref name="pmid11124544">{{cite journal | vauthors = Tascou S, Uedelhoven J, Dixkens C, Nayernia K, Engel W, Burfeind P | title = Isolation and characterization of a novel human gene, NIF3L1, and its mouse ortholog, Nif3l1, highly conserved from bacteria to mammals | journal = Cytogenetics and Cell Genetics | volume = 90 | issue = 3-4 | pages = 330–6 | date = Jan 2001 | pmid = 11124544 | pmc =  | doi = 10.1159/000056799 }}</ref><ref name="pmid11161814">{{cite journal | vauthors = Hadano S, Yanagisawa Y, Skaug J, Fichter K, Nasir J, Martindale D, Koop BF, Scherer SW, Nicholson DW, Rouleau GA, Ikeda J, Hayden MR | title = Cloning and characterization of three novel genes, ALS2CR1, ALS2CR2, and ALS2CR3, in the juvenile amyotrophic lateral sclerosis (ALS2) critical region at chromosome 2q33-q34: candidate genes for ALS2 | journal = Genomics | volume = 71 | issue = 2 | pages = 200–13 | date = Jan 2001 | pmid = 11161814 | pmc =  | doi = 10.1006/geno.2000.6392 }}</ref><ref name="pmid12522100">{{cite journal | vauthors = Akiyama H, Fujisawa N, Tashiro Y, Takanabe N, Sugiyama A, Tashiro F | title = The role of transcriptional corepressor Nif3l1 in early stage of neural differentiation via cooperation with Trip15/CSN2 | journal = The Journal of Biological Chemistry | volume = 278 | issue = 12 | pages = 10752–62 | date = Mar 2003 | pmid = 12522100 | pmc = | doi = 10.1074/jbc.M209856200 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. pombe)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=60491| accessdate = }}</ref>
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<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
== Interactions ==
{{GNF_Protein_box
| image =
| image_source =
| PDB =  
| Name = NIF3 NGG1 interacting factor 3-like 1 (S. pombe)
| HGNCid = 13390
| Symbol = NIF3L1
| AltSymbols =; ALS2CR1; CALS-7; MDS015
| OMIM = 605778
| ECnumber = 
| Homologene = 5881
| MGIid = 1929485
| GeneAtlas_image1 = PBB_GE_NIF3L1_218133_s_at_tn.png
| Function =
| Component = {{GNF_GO|id=GO:0005737 |text = cytoplasm}}
| Process =
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 60491
    | Hs_Ensembl = ENSG00000196290
    | Hs_RefseqProtein = NP_068596
    | Hs_RefseqmRNA = NM_021824
    | Hs_GenLoc_db = 
    | Hs_GenLoc_chr = 2
    | Hs_GenLoc_start = 201462340
    | Hs_GenLoc_end = 201476891
    | Hs_Uniprot = Q9GZT8
    | Mm_EntrezGene = 65102
    | Mm_Ensembl = ENSMUSG00000026036
    | Mm_RefseqmRNA = NM_022988
    | Mm_RefseqProtein = NP_075364
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 1
    | Mm_GenLoc_start = 58389697
    | Mm_GenLoc_end = 58425609
    | Mm_Uniprot = Q3V2R8
  }}
}}
'''NIF3 NGG1 interacting factor 3-like 1 (S. pombe)''', also known as '''NIF3L1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. pombe)| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=60491| accessdate = }}</ref>


<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
NIF3L1 has been shown to [[Protein-protein interaction|interact]] with [[COPS2]].<ref name=pmid12522100 />
{{PBB_Summary
| section_title =  
| summary_text =
}}


==References==
== References ==
{{reflist|2}}
{{reflist}}
==Further reading==
 
== Further reading ==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading
* {{cite journal | vauthors = Maruyama K, Sugano S | title = Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides | journal = Gene | volume = 138 | issue = 1-2 | pages = 171–4 | date = Jan 1994 | pmid = 8125298 | doi = 10.1016/0378-1119(94)90802-8 }}
| citations =
* {{cite journal | vauthors = Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S | title = Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library | journal = Gene | volume = 200 | issue = 1-2 | pages = 149–56 | date = Oct 1997 | pmid = 9373149 | doi = 10.1016/S0378-1119(97)00411-3 }}
*{{cite journal | author=Maruyama K, Sugano S |title=Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. |journal=Gene |volume=138 |issue= 1-2 |pages= 171-4 |year= 1994 |pmid= 8125298 |doi= }}
* {{cite journal | vauthors = Tascou S, Kang TW, Trappe R, Engel W, Burfeind P | title = Identification and characterization of NIF3L1 BP1, a novel cytoplasmic interaction partner of the NIF3L1 protein | journal = Biochemical and Biophysical Research Communications | volume = 309 | issue = 2 | pages = 440–8 | date = Sep 2003 | pmid = 12951069 | doi = 10.1016/j.bbrc.2003.07.008 }}
*{{cite journal | author=Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, ''et al.'' |title=Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library. |journal=Gene |volume=200 |issue= 1-2 |pages= 149-56 |year= 1997 |pmid= 9373149 |doi= }}
* {{cite journal | vauthors = Merla G, Howald C, Antonarakis SE, Reymond A | title = The subcellular localization of the ChoRE-binding protein, encoded by the Williams-Beuren syndrome critical region gene 14, is regulated by 14-3-3 | journal = Human Molecular Genetics | volume = 13 | issue = 14 | pages = 1505–14 | date = Jul 2004 | pmid = 15163635 | doi = 10.1093/hmg/ddh163 }}
*{{cite journal  | author=Tascou S, Uedelhoven J, Dixkens C, ''et al.'' |title=Isolation and characterization of a novel human gene, NIF3L1, and its mouse ortholog, Nif3l1, highly conserved from bacteria to mammals. |journal=Cytogenet. Cell Genet. |volume=90 |issue= 3-4 |pages= 330-6 |year= 2001 |pmid= 11124544 |doi=  }}
* {{cite journal|authorlink30=Huda Zoghbi | vauthors = Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M | title = Towards a proteome-scale map of the human protein-protein interaction network | journal = Nature | volume = 437 | issue = 7062 | pages = 1173–8 | date = Oct 2005 | pmid = 16189514 | doi = 10.1038/nature04209 }}
*{{cite journal  | author=Hadano S, Yanagisawa Y, Skaug J, ''et al.'' |title=Cloning and characterization of three novel genes, ALS2CR1, ALS2CR2, and ALS2CR3, in the juvenile amyotrophic lateral sclerosis (ALS2) critical region at chromosome 2q33-q34: candidate genes for ALS2. |journal=Genomics |volume=71 |issue= 2 |pages= 200-13 |year= 2001 |pmid= 11161814 |doi= 10.1006/geno.2000.6392 }}
* {{cite journal | vauthors = Lim J, Hao T, Shaw C, Patel AJ, Szabó G, Rual JF, Fisk CJ, Li N, Smolyar A, Hill DE, Barabási AL, Vidal M, Zoghbi HY | title = A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration | journal = Cell | volume = 125 | issue = 4 | pages = 801–14 | date = May 2006 | pmid = 16713569 | doi = 10.1016/j.cell.2006.03.032 }}
*{{cite journal | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  | author=Akiyama H, Fujisawa N, Tashiro Y, ''et al.'' |title=The role of transcriptional corepressor Nif3l1 in early stage of neural differentiation via cooperation with Trip15/CSN2. |journal=J. Biol. Chem. |volume=278 |issue= 12 |pages= 10752-62 |year= 2003 |pmid= 12522100 |doi= 10.1074/jbc.M209856200 }}
*{{cite journal  | author=Tascou S, Kang TW, Trappe R, ''et al.'' |title=Identification and characterization of NIF3L1 BP1, a novel cytoplasmic interaction partner of the NIF3L1 protein. |journal=Biochem. Biophys. Res. Commun. |volume=309 |issue= 2 |pages= 440-8 |year= 2003 |pmid= 12951069 |doi= }}
*{{cite journal  | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal | author=Merla G, Howald C, Antonarakis SE, Reymond A |title=The subcellular localization of the ChoRE-binding protein, encoded by the Williams-Beuren syndrome critical region gene 14, is regulated by 14-3-3. |journal=Hum. Mol. Genet. |volume=13 |issue= 14 |pages= 1505-14 |year= 2005 |pmid= 15163635 |doi= 10.1093/hmg/ddh163 }}
*{{cite journal | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{cite journal  | author=Rual JF, Venkatesan K, Hao T, ''et al.'' |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173-8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
*{{cite journal | author=Lim J, Hao T, Shaw C, ''et al.'' |title=A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. |journal=Cell |volume=125 |issue= 4 |pages= 801-14 |year= 2006 |pmid= 16713569 |doi= 10.1016/j.cell.2006.03.032 }}
}}
{{refend}}
{{refend}}


{{protein-stub}}
 
{{WikiDoc Sources}}
{{gene-2-stub}}

Latest revision as of 03:18, 27 October 2017

VALUE_ERROR (nil)
Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

NIF3-like protein 1 is a protein that in humans is encoded by the NIF3L1 gene.[1][2][3][4]

Interactions

NIF3L1 has been shown to interact with COPS2.[3]

References

  1. Tascou S, Uedelhoven J, Dixkens C, Nayernia K, Engel W, Burfeind P (Jan 2001). "Isolation and characterization of a novel human gene, NIF3L1, and its mouse ortholog, Nif3l1, highly conserved from bacteria to mammals". Cytogenetics and Cell Genetics. 90 (3–4): 330–6. doi:10.1159/000056799. PMID 11124544.
  2. Hadano S, Yanagisawa Y, Skaug J, Fichter K, Nasir J, Martindale D, Koop BF, Scherer SW, Nicholson DW, Rouleau GA, Ikeda J, Hayden MR (Jan 2001). "Cloning and characterization of three novel genes, ALS2CR1, ALS2CR2, and ALS2CR3, in the juvenile amyotrophic lateral sclerosis (ALS2) critical region at chromosome 2q33-q34: candidate genes for ALS2". Genomics. 71 (2): 200–13. doi:10.1006/geno.2000.6392. PMID 11161814.
  3. 3.0 3.1 Akiyama H, Fujisawa N, Tashiro Y, Takanabe N, Sugiyama A, Tashiro F (Mar 2003). "The role of transcriptional corepressor Nif3l1 in early stage of neural differentiation via cooperation with Trip15/CSN2". The Journal of Biological Chemistry. 278 (12): 10752–62. doi:10.1074/jbc.M209856200. PMID 12522100.
  4. "Entrez Gene: NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. pombe)".

Further reading

  • Maruyama K, Sugano S (Jan 1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S (Oct 1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
  • Tascou S, Kang TW, Trappe R, Engel W, Burfeind P (Sep 2003). "Identification and characterization of NIF3L1 BP1, a novel cytoplasmic interaction partner of the NIF3L1 protein". Biochemical and Biophysical Research Communications. 309 (2): 440–8. doi:10.1016/j.bbrc.2003.07.008. PMID 12951069.
  • Merla G, Howald C, Antonarakis SE, Reymond A (Jul 2004). "The subcellular localization of the ChoRE-binding protein, encoded by the Williams-Beuren syndrome critical region gene 14, is regulated by 14-3-3". Human Molecular Genetics. 13 (14): 1505–14. doi:10.1093/hmg/ddh163. PMID 15163635.
  • Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M (Oct 2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514.
  • Lim J, Hao T, Shaw C, Patel AJ, Szabó G, Rual JF, Fisk CJ, Li N, Smolyar A, Hill DE, Barabási AL, Vidal M, Zoghbi HY (May 2006). "A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration". Cell. 125 (4): 801–14. doi:10.1016/j.cell.2006.03.032. PMID 16713569.