SCYE1: Difference between revisions

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{{Infobox_gene}}
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'''Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1''' is a protein that in humans is encoded by the ''AIMP1'' [[gene]].<ref name="pmid7929199">{{cite journal  |vauthors=Kao J, Houck K, Fan Y, Haehnel I, Libutti SK, Kayton ML, Grikscheit T, Chabot J, Nowygrod R, Greenberg S, etal | title = Characterization of a novel tumor-derived cytokine. Endothelial-monocyte activating polypeptide II | journal = J Biol Chem | volume = 269 | issue = 40 | pages = 25106–19 |date=Nov 1994 | pmid = 7929199 | pmc =  | doi =  }}</ref><ref name="pmid7545917">{{cite journal |vauthors=Kao J, Fan YG, Haehnel I, Brett J, Greenberg S, Clauss M, Kayton M, Houck K, Kisiel W, Seljelid R, etal | title = A peptide derived from the amino terminus of endothelial-monocyte-activating polypeptide II modulates mononuclear and polymorphonuclear leukocyte functions, defines an apparently novel cellular interaction site, and induces an acute inflammatory response | journal = J Biol Chem | volume = 269 | issue = 13 | pages = 9774–82 |date=May 1994 | pmid = 7545917 | pmc =  | doi =  }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: SCYE1 small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=9255| accessdate = }}</ref>
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<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{GNF_Protein_box
| image = PBB_Protein_SCYE1_image.jpg
| image_source = [[Protein_Data_Bank|PDB]] rendering based on 1e7z.
| PDB = {{PDB2|1e7z}}, {{PDB2|1euj}}, {{PDB2|1fl0}}
| Name = Small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating)
| HGNCid = 10648
| Symbol = SCYE1
| AltSymbols =; AIMP1; EMAP II; EMAP-2; EMAP-II; EMAP2; EMAPII; p43
| OMIM = 603605
| ECnumber =
| Homologene = 31260
| MGIid = 102774
| GeneAtlas_image1 = PBB_GE_SCYE1_202542_s_at_tn.png
  | GeneAtlas_image2 = PBB_GE_SCYE1_202541_at_tn.png
  | Function = {{GNF_GO|id=GO:0000049 |text = tRNA binding}} {{GNF_GO|id=GO:0005125 |text = cytokine activity}}
| Component = {{GNF_GO|id=GO:0005615 |text = extracellular space}}
  | Process = {{GNF_GO|id=GO:0006418 |text = tRNA aminoacylation for protein translation}} {{GNF_GO|id=GO:0006935 |text = chemotaxis}} {{GNF_GO|id=GO:0006954 |text = inflammatory response}} {{GNF_GO|id=GO:0007165 |text = signal transduction}} {{GNF_GO|id=GO:0007267 |text = cell-cell signaling}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 9255
    | Hs_Ensembl = ENSG00000164022
    | Hs_RefseqProtein = NP_004748
    | Hs_RefseqmRNA = NM_004757
    | Hs_GenLoc_db =
    | Hs_GenLoc_chr = 4
    | Hs_GenLoc_start = 107456302
    | Hs_GenLoc_end = 107489097
    | Hs_Uniprot = Q12904
    | Mm_EntrezGene = 13722
    | Mm_Ensembl =   
    | Mm_RefseqmRNA = NM_007926
    | Mm_RefseqProtein = NP_031952
    | Mm_GenLoc_db =   
    | Mm_GenLoc_chr = 
    | Mm_GenLoc_start = 
    | Mm_GenLoc_end = 
    | Mm_Uniprot = 
  }}
}}
'''Small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating)''', also known as '''SCYE1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: SCYE1 small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating)| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=9255| accessdate = }}</ref>


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{{PBB_Summary
{{PBB_Summary
| section_title =  
| section_title =  
| summary_text = The protein encoded by this gene is a cytokine that is specifically induced by apoptosis. The release of this cytokine renders the tumor-associated vasculature sensitive to tumor necrosis factor. The precursor of SCYE1 (pro-SCYE1) is identical to the p43 subunit, which is associated with the multi-tRNA synthetase complex. Therefore, pro-SCYE1 may function in binding RNA as part of the tRNA synthetase complex in normal cells and in stimulating inflammatory responses after proteolytic cleavage in tumor cells.<ref name="entrez">{{cite web | title = Entrez Gene: SCYE1 small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating)| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=9255| accessdate = }}</ref>
| summary_text = The protein encoded by this gene is a cytokine that may be induced by apoptosis and is also released from professional antigen-presenting cells such as dendritic cells. The release of this cytokine renders the tumor-associated vasculature sensitive to tumor necrosis factor. The precursor of SCYE1 (pro-SCYE1) is identical to the p43 subunit, which is associated with the multiaminoacyl-tRNA synthetase complex (mARS). Pro-SCYE1 may function in binding RNA as part of the tRNA synthetase complex in normal cells and in stimulating inflammatory responses after proteolytic cleavage in tumor cells.<ref name="entrez" /> As an inflammatory cytokine, AIMp1/p43 has demonstrated the ability to skew T-helper polarization in the direction of Th-1, and its homozygous deletion leads to a hyper-polarized Th-2 phenotype.
}}
}}
==Interactions==
SCYE1 has been shown to [[Protein-protein interaction|interact]] with [[SMURF2]].<ref name=pmid18448069>{{cite journal |last=Lee |first=Yeon Sook |authorlink= |author2=Han Jung Min |author3=Son Sung Hwa |author4=Choi Jin Woo |author5=Jeon Eun Ju |author6=Bae Suk-Chul |author7=Park Young In |author8=Kim Sunghoon  |date=Jul 2008 |title=AIMP1/p43 downregulates TGF-beta signaling via stabilization of smurf2 |journal=Biochem. Biophys. Res. Commun. |volume=371 |issue=3 |pages=395–400 |publisher= |location = United States| issn = | pmid = 18448069 |doi = 10.1016/j.bbrc.2008.04.099 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = }}</ref>


==References==
==References==
{{reflist|2}}
{{reflist}}
 
==Further reading==
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading  
{{PBB_Further_reading  
| citations =  
| citations =  
*{{cite journal | author=Kao J, Ryan J, Brett G, ''et al.'' |title=Endothelial monocyte-activating polypeptide II. A novel tumor-derived polypeptide that activates host-response mechanisms. |journal=J. Biol. Chem. |volume=267 |issue= 28 |pages= 20239-47 |year= 1992 |pmid= 1400342 |doi=  }}
*{{cite journal   |vauthors=Kao J, Ryan J, Brett G, etal |title=Endothelial monocyte-activating polypeptide II. A novel tumor-derived polypeptide that activates host-response mechanisms |journal=J. Biol. Chem. |volume=267 |issue= 28 |pages= 20239–47 |year= 1992 |pmid= 1400342 |doi=  }}
*{{cite journal  | author=Kao J, Fan YG, Haehnel I, ''et al.'' |title=A peptide derived from the amino terminus of endothelial-monocyte-activating polypeptide II modulates mononuclear and polymorphonuclear leukocyte functions, defines an apparently novel cellular interaction site, and induces an acute inflammatory response. |journal=J. Biol. Chem. |volume=269 |issue= 13 |pages= 9774-82 |year= 1994 |pmid= 7545917 |doi=  }}
*{{cite journal  |author1=Quevillon S |author2=Agou F |author3=Robinson JC |author4=Mirande M |title=The p43 component of the mammalian multi-synthetase complex is likely to be the precursor of the endothelial monocyte-activating polypeptide II cytokine |journal=J. Biol. Chem. |volume=272 |issue= 51 |pages= 32573–9 |year= 1998 |pmid= 9405472 |doi=10.1074/jbc.272.51.32573 }}
*{{cite journal | author=Kao J, Houck K, Fan Y, ''et al.'' |title=Characterization of a novel tumor-derived cytokine. Endothelial-monocyte activating polypeptide II. |journal=J. Biol. Chem. |volume=269 |issue= 40 |pages= 25106-19 |year= 1994 |pmid= 7929199 |doi= }}
*{{cite journal   |vauthors=Quevillon S, Robinson JC, Berthonneau E, etal |title=Macromolecular assemblage of aminoacyl-tRNA synthetases: identification of protein-protein interactions and characterization of a core protein |journal=J. Mol. Biol. |volume=285 |issue= 1 |pages= 183–95 |year= 1999 |pmid= 9878398 |doi= 10.1006/jmbi.1998.2316 }}
*{{cite journal | author=Quevillon S, Agou F, Robinson JC, Mirande M |title=The p43 component of the mammalian multi-synthetase complex is likely to be the precursor of the endothelial monocyte-activating polypeptide II cytokine. |journal=J. Biol. Chem. |volume=272 |issue= 51 |pages= 32573-9 |year= 1998 |pmid= 9405472 |doi= }}
*{{cite journal   |vauthors=Park SG, Jung KH, Lee JS, etal |title=Precursor of pro-apoptotic cytokine modulates aminoacylation activity of tRNA synthetase |journal=J. Biol. Chem. |volume=274 |issue= 24 |pages= 16673–6 |year= 1999 |pmid= 10358004 |doi=10.1074/jbc.274.24.16673  }}
*{{cite journal | author=Quevillon S, Robinson JC, Berthonneau E, ''et al.'' |title=Macromolecular assemblage of aminoacyl-tRNA synthetases: identification of protein-protein interactions and characterization of a core protein. |journal=J. Mol. Biol. |volume=285 |issue= 1 |pages= 183-95 |year= 1999 |pmid= 9878398 |doi= 10.1006/jmbi.1998.2316 }}
*{{cite journal   |vauthors=Kim Y, Shin J, Li R, etal |title=A novel anti-tumor cytokine contains an RNA binding motif present in aminoacyl-tRNA synthetases |journal=J. Biol. Chem. |volume=275 |issue= 35 |pages= 27062–8 |year= 2000 |pmid= 10852899 |doi= 10.1074/jbc.C000216200 }}
*{{cite journal | author=Park SG, Jung KH, Lee JS, ''et al.'' |title=Precursor of pro-apoptotic cytokine modulates aminoacylation activity of tRNA synthetase. |journal=J. Biol. Chem. |volume=274 |issue= 24 |pages= 16673-6 |year= 1999 |pmid= 10358004 |doi=  }}
*{{cite journal   |vauthors=Renault L, Kerjan P, Pasqualato S, etal |title=Structure of the EMAPII domain of human aminoacyl-tRNA synthetase complex reveals evolutionary dimer mimicry |journal=EMBO J. |volume=20 |issue= 3 |pages= 570–8 |year= 2001 |pmid= 11157763 |doi= 10.1093/emboj/20.3.570 | pmc=133484 }}
*{{cite journal | author=Kim Y, Shin J, Li R, ''et al.'' |title=A novel anti-tumor cytokine contains an RNA binding motif present in aminoacyl-tRNA synthetases. |journal=J. Biol. Chem. |volume=275 |issue= 35 |pages= 27062-8 |year= 2000 |pmid= 10852899 |doi= 10.1074/jbc.C000216200 }}
*{{cite journal   |vauthors=Shalak V, Kaminska M, Mitnacht-Kraus R, etal |title=The EMAPII cytokine is released from the mammalian multisynthetase complex after cleavage of its p43/proEMAPII component |journal=J. Biol. Chem. |volume=276 |issue= 26 |pages= 23769–76 |year= 2001 |pmid= 11306575 |doi= 10.1074/jbc.M100489200 }}
*{{cite journal  | author=Renault L, Kerjan P, Pasqualato S, ''et al.'' |title=Structure of the EMAPII domain of human aminoacyl-tRNA synthetase complex reveals evolutionary dimer mimicry. |journal=EMBO J. |volume=20 |issue= 3 |pages= 570-8 |year= 2001 |pmid= 11157763 |doi= 10.1093/emboj/20.3.570 }}
*{{cite journal  |author1=Chang SY |author2=Park SG |author3=Kim S |author4=Kang CY |title=Interaction of the C-terminal domain of p43 and the alpha subunit of ATP synthase. Its functional implication in endothelial cell proliferation |journal=J. Biol. Chem. |volume=277 |issue= 10 |pages= 8388–94 |year= 2002 |pmid= 11741979 |doi= 10.1074/jbc.M108792200 }}
*{{cite journal  | author=Shalak V, Kaminska M, Mitnacht-Kraus R, ''et al.'' |title=The EMAPII cytokine is released from the mammalian multisynthetase complex after cleavage of its p43/proEMAPII component. |journal=J. Biol. Chem. |volume=276 |issue= 26 |pages= 23769-76 |year= 2001 |pmid= 11306575 |doi= 10.1074/jbc.M100489200 }}
*{{cite journal  |author1=Battersby S |author2=Boddy SC |author3=Critchley HO |author4=Jabbour HN |title=Expression and localization of endothelial monocyte-activating polypeptide II in the human endometrium across the menstrual cycle: regulation of expression by prostaglandin E(2) |journal=J. Clin. Endocrinol. Metab. |volume=87 |issue= 8 |pages= 3928–35 |year= 2002 |pmid= 12161535 |doi=10.1210/jc.87.8.3928  }}
*{{cite journal  | author=Chang SY, Park SG, Kim S, Kang CY |title=Interaction of the C-terminal domain of p43 and the alpha subunit of ATP synthase. Its functional implication in endothelial cell proliferation. |journal=J. Biol. Chem. |volume=277 |issue= 10 |pages= 8388-94 |year= 2002 |pmid= 11741979 |doi= 10.1074/jbc.M108792200 }}
*{{cite journal  |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 }}
*{{cite journal | author=Battersby S, Boddy SC, Critchley HO, Jabbour HN |title=Expression and localization of endothelial monocyte-activating polypeptide II in the human endometrium across the menstrual cycle: regulation of expression by prostaglandin E(2). |journal=J. Clin. Endocrinol. Metab. |volume=87 |issue= 8 |pages= 3928-35 |year= 2002 |pmid= 12161535 |doi=  }}
*{{cite journal   |vauthors=Park H, Park SG, Kim J, etal |title=Signaling pathways for TNF production induced by human aminoacyl-tRNA synthetase-associating factor, p43 |journal=Cytokine |volume=20 |issue= 4 |pages= 148–53 |year= 2003 |pmid= 12543078 |doi=10.1006/cyto.2002.1992 }}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  |author1=Ahn HC |author2=Kim S |author3=Lee BJ |title=Solution structure and p43 binding of the p38 leucine zipper motif: coiled-coil interactions mediate the association between p38 and p43 |journal=FEBS Lett. |volume=542 |issue= 1–3 |pages= 119–24 |year= 2003 |pmid= 12729910 |doi=10.1016/S0014-5793(03)00362-4  }}
*{{cite journal | author=Park H, Park SG, Kim J, ''et al.'' |title=Signaling pathways for TNF production induced by human aminoacyl-tRNA synthetase-associating factor, p43. |journal=Cytokine |volume=20 |issue= 4 |pages= 148-53 |year= 2003 |pmid= 12543078 |doi= }}
*{{cite journal   |vauthors=Kim MJ, Park BJ, Kang YS, etal |title=Downregulation of FUSE-binding protein and c-myc by tRNA synthetase cofactor p38 is required for lung cell differentiation |journal=Nat. Genet. |volume=34 |issue= 3 |pages= 330–6 |year= 2003 |pmid= 12819782 |doi= 10.1038/ng1182 }}
*{{cite journal | author=Ahn HC, Kim S, Lee BJ |title=Solution structure and p43 binding of the p38 leucine zipper motif: coiled-coil interactions mediate the association between p38 and p43. |journal=FEBS Lett. |volume=542 |issue= 1-3 |pages= 119-24 |year= 2003 |pmid= 12729910 |doi=  }}
*{{cite journal   |vauthors=Wolfe CL, Warrington JA, Davis S, etal |title=Isolation and characterization of human nuclear and cytosolic multisynthetase complexes and the intracellular distribution of p43/EMAPII |journal=Protein Sci. |volume=12 |issue= 10 |pages= 2282–90 |year= 2004 |pmid= 14500886 |doi=10.1110/ps.03147903  | pmc=2366922 }}
*{{cite journal | author=Kim MJ, Park BJ, Kang YS, ''et al.'' |title=Downregulation of FUSE-binding protein and c-myc by tRNA synthetase cofactor p38 is required for lung cell differentiation. |journal=Nat. Genet. |volume=34 |issue= 3 |pages= 330-6 |year= 2003 |pmid= 12819782 |doi= 10.1038/ng1182 }}
*{{cite journal   |vauthors=Mueller CA, Schluesener HJ, Conrad S, etal |title=Spinal cord injury induces lesional expression of the proinflammatory and antiangiogenic cytokine EMAP II |journal=J. Neurotrauma |volume=20 |issue= 10 |pages= 1007–15 |year= 2004 |pmid= 14588117 |doi= 10.1089/089771503770195858 }}
*{{cite journal | author=Wolfe CL, Warrington JA, Davis S, ''et al.'' |title=Isolation and characterization of human nuclear and cytosolic multisynthetase complexes and the intracellular distribution of p43/EMAPII. |journal=Protein Sci. |volume=12 |issue= 10 |pages= 2282-90 |year= 2004 |pmid= 14500886 |doi=  }}
*{{cite journal   |vauthors=Murray JC, Symonds P, Ward W, etal |title=Colorectal cancer cells induce lymphocyte apoptosis by an endothelial monocyte-activating polypeptide-II-dependent mechanism |journal=J. Immunol. |volume=172 |issue= 1 |pages= 274–81 |year= 2004 |pmid= 14688335 |doi=  10.4049/jimmunol.172.1.274}}
*{{cite journal  | author=Mueller CA, Schluesener HJ, Conrad S, ''et al.'' |title=Spinal cord injury induces lesional expression of the proinflammatory and antiangiogenic cytokine EMAP II. |journal=J. Neurotrauma |volume=20 |issue= 10 |pages= 1007-15 |year= 2004 |pmid= 14588117 |doi= 10.1089/089771503770195858 }}
*{{cite journal   |vauthors=Ota T, Suzuki Y, Nishikawa T, etal |title=Complete sequencing and characterization of 21,243 full-length human cDNAs |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal  | author=Murray JC, Symonds P, Ward W, ''et al.'' |title=Colorectal cancer cells induce lymphocyte apoptosis by an endothelial monocyte-activating polypeptide-II-dependent mechanism. |journal=J. Immunol. |volume=172 |issue= 1 |pages= 274-81 |year= 2004 |pmid= 14688335 |doi=  }}
*{{cite journal   |vauthors=Murray JC, Heng YM, Symonds P, etal |title=Endothelial monocyte-activating polypeptide-II (EMAP-II): a novel inducer of lymphocyte apoptosis |journal=J. Leukoc. Biol. |volume=75 |issue= 5 |pages= 772–6 |year= 2004 |pmid= 14982944 |doi= 10.1189/jlb.1003487 }}
*{{cite journal | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal | author=Murray JC, Heng YM, Symonds P, ''et al.'' |title=Endothelial monocyte-activating polypeptide-II (EMAP-II): a novel inducer of lymphocyte apoptosis. |journal=J. Leukoc. Biol. |volume=75 |issue= 5 |pages= 772-6 |year= 2004 |pmid= 14982944 |doi= 10.1189/jlb.1003487 }}
}}
}}
{{refend}}
{{refend}}
{{PDB Gallery|geneid=9255}}
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Revision as of 06:01, 11 September 2017

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Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez

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Ensembl

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UniProt

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RefSeq (mRNA)

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RefSeq (protein)

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View/Edit Human

Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 is a protein that in humans is encoded by the AIMP1 gene.[1][2][3]

The protein encoded by this gene is a cytokine that may be induced by apoptosis and is also released from professional antigen-presenting cells such as dendritic cells. The release of this cytokine renders the tumor-associated vasculature sensitive to tumor necrosis factor. The precursor of SCYE1 (pro-SCYE1) is identical to the p43 subunit, which is associated with the multiaminoacyl-tRNA synthetase complex (mARS). Pro-SCYE1 may function in binding RNA as part of the tRNA synthetase complex in normal cells and in stimulating inflammatory responses after proteolytic cleavage in tumor cells.[3] As an inflammatory cytokine, AIMp1/p43 has demonstrated the ability to skew T-helper polarization in the direction of Th-1, and its homozygous deletion leads to a hyper-polarized Th-2 phenotype.

Interactions

SCYE1 has been shown to interact with SMURF2.[4]

References

  1. ↑ Kao J, Houck K, Fan Y, Haehnel I, Libutti SK, Kayton ML, Grikscheit T, Chabot J, Nowygrod R, Greenberg S, et al. (Nov 1994). "Characterization of a novel tumor-derived cytokine. Endothelial-monocyte activating polypeptide II". J Biol Chem. 269 (40): 25106–19. PMID 7929199.
  2. ↑ Kao J, Fan YG, Haehnel I, Brett J, Greenberg S, Clauss M, Kayton M, Houck K, Kisiel W, Seljelid R, et al. (May 1994). "A peptide derived from the amino terminus of endothelial-monocyte-activating polypeptide II modulates mononuclear and polymorphonuclear leukocyte functions, defines an apparently novel cellular interaction site, and induces an acute inflammatory response". J Biol Chem. 269 (13): 9774–82. PMID 7545917.
  3. ↑ 3.0 3.1 "Entrez Gene: SCYE1 small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating)".
  4. ↑ Lee, Yeon Sook; Han Jung Min; Son Sung Hwa; Choi Jin Woo; Jeon Eun Ju; Bae Suk-Chul; Park Young In; Kim Sunghoon (Jul 2008). "AIMP1/p43 downregulates TGF-beta signaling via stabilization of smurf2". Biochem. Biophys. Res. Commun. United States. 371 (3): 395–400. doi:10.1016/j.bbrc.2008.04.099. PMID 18448069.

Further reading



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