Survival motor neuron domain containing 1: Difference between revisions

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'''Survival of motor neuron-related-splicing factor 30''' is a [[protein]] that in humans is encoded by the ''SMNDC1'' [[gene]].<ref name="pmid9731529">{{cite journal |vauthors=Neubauer G, King A, Rappsilber J, Calvio C, Watson M, Ajuh P, Sleeman J, Lamond A, Mann M | title = Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex | journal = Nat Genet | volume = 20 | issue = 1 | pages = 46–50 |date=Oct 1998 | pmid = 9731529 | pmc =  | doi = 10.1038/1700 }}</ref><ref name="pmid9817934">{{cite journal |vauthors=Talbot K, Miguel-Aliaga I, Mohaghegh P, Ponting CP, Davies KE | title = Characterization of a gene encoding survival motor neuron (SMN)-related protein, a constituent of the spliceosome complex | journal = Hum Mol Genet | volume = 7 | issue = 13 | pages = 2149–56 |date=Jan 1999 | pmid = 9817934 | pmc =  | doi =10.1093/hmg/7.13.2149 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: SMNDC1 survival motor neuron domain containing 1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=10285| accessdate = }}</ref>
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{{GNF_Protein_box
| image = 
| image_source = 
| PDB =
| Name = Survival motor neuron domain containing 1
| HGNCid = 16900
| Symbol = SMNDC1
| AltSymbols =; SMNR; SPF30
| OMIM = 603519
| ECnumber = 
| Homologene = 4290
| MGIid = 1923729
| GeneAtlas_image1 = PBB_GE_SMNDC1_200071_at_tn.png
| Function = {{GNF_GO|id=GO:0005515 |text = protein binding}} {{GNF_GO|id=GO:0031202 |text = RNA splicing factor activity, transesterification mechanism}}
| Component = {{GNF_GO|id=GO:0005634 |text = nucleus}} {{GNF_GO|id=GO:0005681 |text = spliceosome}} {{GNF_GO|id=GO:0005737 |text = cytoplasm}}
  | Process = {{GNF_GO|id=GO:0000245 |text = spliceosome assembly}} {{GNF_GO|id=GO:0006397 |text = mRNA processing}} {{GNF_GO|id=GO:0006915 |text = apoptosis}} {{GNF_GO|id=GO:0006917 |text = induction of apoptosis}} {{GNF_GO|id=GO:0008380 |text = RNA splicing}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 10285
    | Hs_Ensembl = ENSG00000119953
    | Hs_RefseqProtein = NP_005862
    | Hs_RefseqmRNA = NM_005871
    | Hs_GenLoc_db =   
    | Hs_GenLoc_chr = 10
    | Hs_GenLoc_start = 112042788
    | Hs_GenLoc_end = 112054699
    | Hs_Uniprot = O75940
    | Mm_EntrezGene = 76479
    | Mm_Ensembl = ENSMUSG00000025024
    | Mm_RefseqmRNA = NM_172429
    | Mm_RefseqProtein = NP_766017
    | Mm_GenLoc_db =  
    | Mm_GenLoc_chr = 19
    | Mm_GenLoc_start = 53433776
    | Mm_GenLoc_end = 53442734
    | Mm_Uniprot = Q3TGV3
  }}
}}
'''Survival motor neuron domain containing 1''', also known as '''SMNDC1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: SMNDC1 survival motor neuron domain containing 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=10285| accessdate = }}</ref>


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==References==
==References==
{{reflist|2}}
{{reflist}}
 
==Further reading==
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading  
{{PBB_Further_reading  
| citations =  
| citations =  
*{{cite journal  | author=Neubauer G, King A, Rappsilber J, ''et al.'' |title=Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex. |journal=Nat. Genet. |volume=20 |issue= 1 |pages= 46-50 |year= 1998 |pmid= 9731529 |doi= 10.1038/1700 }}
*{{cite journal  |vauthors=Rappsilber J, Ajuh P, Lamond AI, Mann M |title=SPF30 is an essential human splicing factor required for assembly of the U4/U5/U6 tri-small nuclear ribonucleoprotein into the spliceosome. |journal=J. Biol. Chem. |volume=276 |issue= 33 |pages= 31142–50 |year= 2001 |pmid= 11331295 |doi= 10.1074/jbc.M103620200 }}
*{{cite journal  | author=Talbot K, Miguel-Aliaga I, Mohaghegh P, ''et al.'' |title=Characterization of a gene encoding survival motor neuron (SMN)-related protein, a constituent of the spliceosome complex. |journal=Hum. Mol. Genet. |volume=7 |issue= 13 |pages= 2149-56 |year= 1999 |pmid= 9817934 |doi=  }}
*{{cite journal   |vauthors=Meister G, Hannus S, Plöttner O, etal |title=SMNrp is an essential pre-mRNA splicing factor required for the formation of the mature spliceosome. |journal=EMBO J. |volume=20 |issue= 9 |pages= 2304–14 |year= 2001 |pmid= 11331595 |doi= 10.1093/emboj/20.9.2304 | pmc=125440 }}
*{{cite journal  | author=Rappsilber J, Ajuh P, Lamond AI, Mann M |title=SPF30 is an essential human splicing factor required for assembly of the U4/U5/U6 tri-small nuclear ribonucleoprotein into the spliceosome. |journal=J. Biol. Chem. |volume=276 |issue= 33 |pages= 31142-50 |year= 2001 |pmid= 11331295 |doi= 10.1074/jbc.M103620200 }}
*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 }}
*{{cite journal | author=Meister G, Hannus S, Plöttner O, ''et al.'' |title=SMNrp is an essential pre-mRNA splicing factor required for the formation of the mature spliceosome. |journal=EMBO J. |volume=20 |issue= 9 |pages= 2304-14 |year= 2001 |pmid= 11331595 |doi= 10.1093/emboj/20.9.2304 }}
*{{cite journal   |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 }}
*{{cite journal | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  |vauthors=Narayanan U, Achsel T, Lührmann R, Matera AG |title=Coupled in vitro import of U snRNPs and SMN, the spinal muscular atrophy protein. |journal=Mol. Cell |volume=16 |issue= 2 |pages= 223–34 |year= 2004 |pmid= 15494309 |doi= 10.1016/j.molcel.2004.09.024 }}
*{{cite journal | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{cite journal   |vauthors=Andersen JS, Lam YW, Leung AK, etal |title=Nucleolar proteome dynamics. |journal=Nature |volume=433 |issue= 7021 |pages= 77–83 |year= 2005 |pmid= 15635413 |doi= 10.1038/nature03207 }}
*{{cite journal  | author=Narayanan U, Achsel T, Lührmann R, Matera AG |title=Coupled in vitro import of U snRNPs and SMN, the spinal muscular atrophy protein. |journal=Mol. Cell |volume=16 |issue= 2 |pages= 223-34 |year= 2004 |pmid= 15494309 |doi= 10.1016/j.molcel.2004.09.024 }}
*{{cite journal   |vauthors=Beausoleil SA, Villén J, Gerber SA, etal |title=A probability-based approach for high-throughput protein phosphorylation analysis and site localization. |journal=Nat. Biotechnol. |volume=24 |issue= 10 |pages= 1285–92 |year= 2006 |pmid= 16964243 |doi= 10.1038/nbt1240 }}
*{{cite journal | author=Andersen JS, Lam YW, Leung AK, ''et al.'' |title=Nucleolar proteome dynamics. |journal=Nature |volume=433 |issue= 7021 |pages= 77-83 |year= 2005 |pmid= 15635413 |doi= 10.1038/nature03207 }}
*{{cite journal   |vauthors=Ewing RM, Chu P, Elisma F, etal |title=Large-scale mapping of human protein-protein interactions by mass spectrometry. |journal=Mol. Syst. Biol. |volume=3 |issue=  1|pages= 89 |year= 2007 |pmid= 17353931 |doi= 10.1038/msb4100134 | pmc=1847948 }}
*{{cite journal | author=Beausoleil SA, Villén J, Gerber SA, ''et al.'' |title=A probability-based approach for high-throughput protein phosphorylation analysis and site localization. |journal=Nat. Biotechnol. |volume=24 |issue= 10 |pages= 1285-92 |year= 2006 |pmid= 16964243 |doi= 10.1038/nbt1240 }}
*{{cite journal | author=Ewing RM, Chu P, Elisma F, ''et al.'' |title=Large-scale mapping of human protein-protein interactions by mass spectrometry. |journal=Mol. Syst. Biol. |volume=3 |issue=  |pages= 89 |year= 2007 |pmid= 17353931 |doi= 10.1038/msb4100134 }}
}}
}}
{{refend}}
{{refend}}


{{protein-stub}}
==External links==
* {{UCSC genome browser|SMNDC1}}
* {{UCSC gene details|SMNDC1}}
 
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Latest revision as of 09:11, 15 September 2017

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Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez

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Ensembl

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UniProt

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RefSeq (mRNA)

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RefSeq (protein)

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Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Survival of motor neuron-related-splicing factor 30 is a protein that in humans is encoded by the SMNDC1 gene.[1][2][3]


References

  1. ↑ Neubauer G, King A, Rappsilber J, Calvio C, Watson M, Ajuh P, Sleeman J, Lamond A, Mann M (Oct 1998). "Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex". Nat Genet. 20 (1): 46–50. doi:10.1038/1700. PMID 9731529.
  2. ↑ Talbot K, Miguel-Aliaga I, Mohaghegh P, Ponting CP, Davies KE (Jan 1999). "Characterization of a gene encoding survival motor neuron (SMN)-related protein, a constituent of the spliceosome complex". Hum Mol Genet. 7 (13): 2149–56. doi:10.1093/hmg/7.13.2149. PMID 9817934.
  3. ↑ "Entrez Gene: SMNDC1 survival motor neuron domain containing 1".

Further reading

External links



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