DRAP1: Difference between revisions

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{{Infobox_gene}}
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'''Dr1-associated corepressor''' is a [[protein]] that in humans is encoded by the ''DRAP1'' [[gene]].<ref name="pmid8608938">{{cite journal | vauthors = Mermelstein F, Yeung K, Cao J, Inostroza JA, Erdjument-Bromage H, Eagelson K, Landsman D, Levitt P, Tempst P, Reinberg D | title = Requirement of a corepressor for Dr1-mediated repression of transcription | journal = Genes Dev | volume = 10 | issue = 8 | pages = 1033–48 |date=May 1996 | pmid = 8608938 | pmc =  | doi =10.1101/gad.10.8.1033 }}</ref><ref name="entrez">{{Cite web| title = Entrez Gene: DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=10589| accessdate = }}</ref>
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<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{GNF_Protein_box
| image = PBB_Protein_DRAP1_image.jpg
| image_source = [[Protein_Data_Bank|PDB]] rendering based on 1jfi.
| PDB = {{PDB2|1jfi}}
| Name = DR1-associated protein 1 (negative cofactor 2 alpha)
| HGNCid = 3019
| Symbol = DRAP1
| AltSymbols =; NC2-alpha
| OMIM = 602289
| ECnumber = 
| Homologene = 4703
| MGIid = 1913806
| GeneAtlas_image1 = PBB_GE_DRAP1_203258_at_tn.png
| Function = {{GNF_GO|id=GO:0003700 |text = transcription factor activity}} {{GNF_GO|id=GO:0003714 |text = transcription corepressor activity}} {{GNF_GO|id=GO:0043565 |text = sequence-specific DNA binding}}
| Component = {{GNF_GO|id=GO:0005622 |text = intracellular}} {{GNF_GO|id=GO:0005634 |text = nucleus}}
| Process = {{GNF_GO|id=GO:0000122 |text = negative regulation of transcription from RNA polymerase II promoter}} {{GNF_GO|id=GO:0006350 |text = transcription}} {{GNF_GO|id=GO:0006355 |text = regulation of transcription, DNA-dependent}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 10589
    | Hs_Ensembl = ENSG00000175550
    | Hs_RefseqProtein = NP_006433
    | Hs_RefseqmRNA = NM_006442
    | Hs_GenLoc_db =   
    | Hs_GenLoc_chr = 11
    | Hs_GenLoc_start = 65443304
    | Hs_GenLoc_end = 65445607
    | Hs_Uniprot = Q14919
    | Mm_EntrezGene = 66556
    | Mm_Ensembl = ENSMUSG00000024914
    | Mm_RefseqmRNA = XM_976049
    | Mm_RefseqProtein = XP_981143
    | Mm_GenLoc_db =   
    | Mm_GenLoc_chr = 19
    | Mm_GenLoc_start = 5422811
    | Mm_GenLoc_end = 5424916
    | Mm_Uniprot = Q4FJW2
  }}
}}
'''DR1-associated protein 1 (negative cofactor 2 alpha)''', also known as '''DRAP1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha)| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=10589| accessdate = }}</ref>


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{{PBB_Summary
| section_title =  
| section_title =
| summary_text = Transcriptional repression is a general mechanism for regulating transcriptional initiation in organisms ranging from yeast to humans.  Accurate initiation of transcription from eukaryotic protein-encoding genes requires the assembly of a large multiprotein complex consisting of RNA polymerase II and general transcription factors such as TFIIA, TFIIB, and TFIID. DR1 is a repressor that interacts with the TATA-binding protein (TBP) of TFIID and prevents the formation of an active transcription complex by precluding the entry of TFIIA and/or TFIIB into the preinitiation complex. The protein encoded by this gene is a corepressor of transcription that interacts with DR1 to enhance DR1-mediated repression. The interaction between this corepressor and DR1 is required for corepressor function and appears to stabilize the TBP-DR1-DNA complex.<ref name="entrez">{{cite web | title = Entrez Gene: DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha)| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=10589| accessdate = }}</ref>
| summary_text = Transcriptional repression is a general mechanism for regulating transcriptional initiation in organisms ranging from yeast to humans.  Accurate initiation of transcription from eukaryotic protein-encoding genes requires the assembly of a large multiprotein complex consisting of RNA polymerase II and general transcription factors such as TFIIA, TFIIB, and TFIID. DR1 is a repressor that interacts with the TATA-binding protein (TBP) of TFIID and prevents the formation of an active transcription complex by precluding the entry of TFIIA and/or TFIIB into the preinitiation complex. The protein encoded by this gene is a corepressor of transcription that interacts with DR1 to enhance DR1-mediated repression. The interaction between this corepressor and DR1 is required for corepressor function and appears to stabilize the TBP-DR1-DNA complex.<ref name="entrez"/>
}}
}}
==Interactions==
DRAP1 has been shown to [[Protein-protein interaction|interact]] with [[FOXH1]]<ref name=pmid12471260>{{cite journal |last=Iratni |first=Rabah |author2=Yan Yu-Ting |author3=Chen Canhe |author4=Ding Jixiang |author5=Zhang Yi |author6=Price Sandy M |author7=Reinberg Danny |author8=Shen Michael M  |date=Dec 2002 |title=Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1 |journal=[[Science (journal)|Science]] |volume=298 |issue=5600 |pages=1996–9 |publisher= |location = United States| issn = | pmid = 12471260 |doi = 10.1126/science.1073405 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = }}</ref> and [[DR1 (gene)|DR1]].<ref name=autogenerated1>{{cite journal |last=Mermelstein |first=F |author2=Yeung K |author3=Cao J |author4=Inostroza J A |author5=Erdjument-Bromage H |author6=Eagelson K |author7=Landsman D |author8=Levitt P |author9=Tempst P |author10=Reinberg D  |date=Apr 1996 |title=Requirement of a corepressor for Dr1-mediated repression of transcription |journal=Genes Dev. |volume=10 |issue=8 |pages=1033–48 |publisher= |location = UNITED STATES| issn = 0890-9369| pmid = 8608938 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |doi=10.1101/gad.10.8.1033 }}</ref><ref name=pmid8972183>{{cite journal |last=Yeung |first=K |author2=Kim S |author3=Reinberg D  |date=Jan 1997 |title=Functional dissection of a human Dr1-DRAP1 repressor complex |journal=Mol. Cell. Biol. |volume=17 |issue=1 |pages=36–45 |publisher= |location = UNITED STATES| issn = 0270-7306| pmid = 8972183 | bibcode = | oclc =| id = | url = | language = | format = | accessdate = | laysummary = | laysource = | laydate = | quote = |pmc=231727 }}</ref>


==References==
==References==
{{reflist|2}}
{{Reflist}}
 
==Further reading==
==Further reading==
{{refbegin | 2}}
{{Refbegin| 2}}
{{PBB_Further_reading  
{{PBB_Further_reading
| citations =  
| citations =
*{{cite journal  | author=Mermelstein F, Yeung K, Cao J, ''et al.'' |title=Requirement of a corepressor for Dr1-mediated repression of transcription. |journal=Genes Dev. |volume=10 |issue= 8 |pages= 1033-48 |year= 1996 |pmid= 8608938 |doi=  }}
*{{Cite journal  | vauthors=Goppelt A, Stelzer G, Lottspeich F, Meisterernst M |title=A mechanism for repression of class II gene transcription through specific binding of NC2 to TBP-promoter complexes via heterodimeric histone fold domains. |journal=EMBO J. |volume=15 |issue= 12 |pages= 3105–16 |year= 1996 |pmid= 8670811 |doi= | pmc=450253 }}
*{{cite journal  | author=Goppelt A, Stelzer G, Lottspeich F, Meisterernst M |title=A mechanism for repression of class II gene transcription through specific binding of NC2 to TBP-promoter complexes via heterodimeric histone fold domains. |journal=EMBO J. |volume=15 |issue= 12 |pages= 3105-16 |year= 1996 |pmid= 8670811 |doi=  }}
*{{Cite journal  | vauthors=Yeung K, Kim S, Reinberg D |title=Functional dissection of a human Dr1-DRAP1 repressor complex. |journal=Mol. Cell. Biol. |volume=17 |issue= 1 |pages= 36–45 |year= 1997 |pmid= 8972183 |doi= | pmc=231727 }}
*{{cite journal  | author=Yeung K, Kim S, Reinberg D |title=Functional dissection of a human Dr1-DRAP1 repressor complex. |journal=Mol. Cell. Biol. |volume=17 |issue= 1 |pages= 36-45 |year= 1997 |pmid= 8972183 |doi=  }}
*{{Cite journal  | vauthors=Ikeda K, Halle JP, Stelzer G |title=Involvement of negative cofactor NC2 in active repression by zinc finger-homeodomain transcription factor AREB6. |journal=Mol. Cell. Biol. |volume=18 |issue= 1 |pages= 10–8 |year= 1998 |pmid= 9418848 |doi=  10.1128/mcb.18.1.10| pmc=121442  |display-authors=etal}}
*{{cite journal  | author=Ikeda K, Halle JP, Stelzer G, ''et al.'' |title=Involvement of negative cofactor NC2 in active repression by zinc finger-homeodomain transcription factor AREB6. |journal=Mol. Cell. Biol. |volume=18 |issue= 1 |pages= 10-8 |year= 1998 |pmid= 9418848 |doi= }}
*{{Cite journal  | vauthors=Castaño E, Gross P, Wang Z |title=The C-terminal domain-phosphorylated IIO form of RNA polymerase II is associated with the transcription repressor NC2 (Dr1/DRAP1) and is required for transcription activation in human nuclear extracts. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=97 |issue= 13 |pages= 7184–9 |year= 2000 |pmid= 10852970 |doi= 10.1073/pnas.140202297  | pmc=16520 |display-authors=etal}}
*{{cite journal  | author=Castaño E, Gross P, Wang Z, ''et al.'' |title=The C-terminal domain-phosphorylated IIO form of RNA polymerase II is associated with the transcription repressor NC2 (Dr1/DRAP1) and is required for transcription activation in human nuclear extracts. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=97 |issue= 13 |pages= 7184-9 |year= 2000 |pmid= 10852970 |doi= 10.1073/pnas.140202297 }}
*{{Cite journal  | vauthors=Kamada K, Shu F, Chen H |title=Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex. |journal=Cell |volume=106 |issue= 1 |pages= 71–81 |year= 2001 |pmid= 11461703 |doi=10.1016/S0092-8674(01)00417-2  |display-authors=etal}}
*{{cite journal  | author=Kamada K, Shu F, Chen H, ''et al.'' |title=Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex. |journal=Cell |volume=106 |issue= 1 |pages= 71-81 |year= 2001 |pmid= 11461703 |doi= }}
*{{Cite journal  | vauthors=Iratni R, Yan YT, Chen C |title=Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1. |journal=Science |volume=298 |issue= 5600 |pages= 1996–9 |year= 2003 |pmid= 12471260 |doi= 10.1126/science.1073405 |display-authors=etal}}
*{{cite journal  | author=Iratni R, Yan YT, Chen C, ''et al.'' |title=Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1. |journal=Science |volume=298 |issue= 5600 |pages= 1996-9 |year= 2003 |pmid= 12471260 |doi= 10.1126/science.1073405 }}
*{{Cite journal  | vauthors=Denko N, Wernke-Dollries K, Johnson AB |title=Hypoxia actively represses transcription by inducing negative cofactor 2 (Dr1/DrAP1) and blocking preinitiation complex assembly. |journal=J. Biol. Chem. |volume=278 |issue= 8 |pages= 5744–9 |year= 2003 |pmid= 12477712 |doi= 10.1074/jbc.M212534200 |display-authors=etal}}
*{{cite journal  | author=Denko N, Wernke-Dollries K, Johnson AB, ''et al.'' |title=Hypoxia actively represses transcription by inducing negative cofactor 2 (Dr1/DrAP1) and blocking preinitiation complex assembly. |journal=J. Biol. Chem. |volume=278 |issue= 8 |pages= 5744-9 |year= 2003 |pmid= 12477712 |doi= 10.1074/jbc.M212534200 }}
*{{Cite journal  | vauthors=Strausberg RL, Feingold EA, Grouse LH |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 |display-authors=etal}}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{Cite journal  | vauthors=Leonard D, Ajuh P, Lamond AI, Legerski RJ |title=hLodestar/HuF2 interacts with CDC5L and is involved in pre-mRNA splicing. |journal=Biochem. Biophys. Res. Commun. |volume=308 |issue= 4 |pages= 793–801 |year= 2003 |pmid= 12927788 |doi=10.1016/S0006-291X(03)01486-4  }}
*{{cite journal  | author=Leonard D, Ajuh P, Lamond AI, Legerski RJ |title=hLodestar/HuF2 interacts with CDC5L and is involved in pre-mRNA splicing. |journal=Biochem. Biophys. Res. Commun. |volume=308 |issue= 4 |pages= 793-801 |year= 2003 |pmid= 12927788 |doi=  }}
*{{Cite journal  | vauthors=Gerhard DS, Wagner L, Feingold EA |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 |display-authors=etal}}
*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{Cite journal  | vauthors=Klejman MP, Pereira LA, van Zeeburg HJ |title=NC2alpha interacts with BTAF1 and stimulates its ATP-dependent association with TATA-binding protein. |journal=Mol. Cell. Biol. |volume=24 |issue= 22 |pages= 10072–82 |year= 2004 |pmid= 15509807 |doi= 10.1128/MCB.24.22.10072-10082.2004  | pmc=525489 |display-authors=etal}}
*{{cite journal  | author=Klejman MP, Pereira LA, van Zeeburg HJ, ''et al.'' |title=NC2alpha interacts with BTAF1 and stimulates its ATP-dependent association with TATA-binding protein. |journal=Mol. Cell. Biol. |volume=24 |issue= 22 |pages= 10072-82 |year= 2004 |pmid= 15509807 |doi= 10.1128/MCB.24.22.10072-10082.2004 }}
*{{Cite journal  | vauthors=Lewis BA, Sims RJ, Lane WS, Reinberg D |title=Functional characterization of core promoter elements: DPE-specific transcription requires the protein kinase CK2 and the PC4 coactivator. |journal=Mol. Cell |volume=18 |issue= 4 |pages= 471–81 |year= 2005 |pmid= 15893730 |doi= 10.1016/j.molcel.2005.04.005 }}
*{{cite journal  | author=Lewis BA, Sims RJ, Lane WS, Reinberg D |title=Functional characterization of core promoter elements: DPE-specific transcription requires the protein kinase CK2 and the PC4 coactivator. |journal=Mol. Cell |volume=18 |issue= 4 |pages= 471-81 |year= 2005 |pmid= 15893730 |doi= 10.1016/j.molcel.2005.04.005 }}
*{{Cite journal  | vauthors=Stelzl U, Worm U, Lalowski M |title=A human protein-protein interaction network: a resource for annotating the proteome. |journal=Cell |volume=122 |issue= 6 |pages= 957–68 |year= 2005 |pmid= 16169070 |doi= 10.1016/j.cell.2005.08.029 |display-authors=etal}}
*{{cite journal  | author=Stelzl U, Worm U, Lalowski M, ''et al.'' |title=A human protein-protein interaction network: a resource for annotating the proteome. |journal=Cell |volume=122 |issue= 6 |pages= 957-68 |year= 2005 |pmid= 16169070 |doi= 10.1016/j.cell.2005.08.029 }}
*{{Cite journal  | vauthors=Rual JF, Venkatesan K, Hao T |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 |display-authors=etal}}
*{{cite journal  | author=Rual JF, Venkatesan K, Hao T, ''et al.'' |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173-8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
*{{Cite journal  | vauthors=Assmann EM, Alborghetti MR, Camargo ME, Kobarg J |title=FEZ1 dimerization and interaction with transcription regulatory proteins involves its coiled-coil region. |journal=J. Biol. Chem. |volume=281 |issue= 15 |pages= 9869–81 |year= 2006 |pmid= 16484223 |doi= 10.1074/jbc.M513280200 }}
*{{cite journal  | author=Assmann EM, Alborghetti MR, Camargo ME, Kobarg J |title=FEZ1 dimerization and interaction with transcription regulatory proteins involves its coiled-coil region. |journal=J. Biol. Chem. |volume=281 |issue= 15 |pages= 9869-81 |year= 2006 |pmid= 16484223 |doi= 10.1074/jbc.M513280200 }}
*{{Cite journal  | vauthors=Lim J, Hao T, Shaw C |title=A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. |journal=Cell |volume=125 |issue= 4 |pages= 801–14 |year= 2006 |pmid= 16713569 |doi= 10.1016/j.cell.2006.03.032 |display-authors=etal}}
*{{cite journal  | author=Lim J, Hao T, Shaw C, ''et al.'' |title=A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. |journal=Cell |volume=125 |issue= 4 |pages= 801-14 |year= 2006 |pmid= 16713569 |doi= 10.1016/j.cell.2006.03.032 }}
*{{Cite journal  | vauthors=Albert TK, Grote K, Boeing S |title=Global distribution of negative cofactor 2 subunit-alpha on human promoters. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=104 |issue= 24 |pages= 10000–5 |year= 2007 |pmid= 17548813 |doi= 10.1073/pnas.0703490104 | pmc=1891239 |display-authors=etal}}
*{{cite journal | author=Albert TK, Grote K, Boeing S, ''et al.'' |title=Global distribution of negative cofactor 2 subunit-alpha on human promoters. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=104 |issue= 24 |pages= 10000-5 |year= 2007 |pmid= 17548813 |doi= 10.1073/pnas.0703490104 }}
}}
}}
{{refend}}
{{Refend}}
{{PDB Gallery|geneid=10589}}
 
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Revision as of 18:43, 30 August 2017

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Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez

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Ensembl

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Wikidata
View/Edit Human

Dr1-associated corepressor is a protein that in humans is encoded by the DRAP1 gene.[1][2]

Transcriptional repression is a general mechanism for regulating transcriptional initiation in organisms ranging from yeast to humans. Accurate initiation of transcription from eukaryotic protein-encoding genes requires the assembly of a large multiprotein complex consisting of RNA polymerase II and general transcription factors such as TFIIA, TFIIB, and TFIID. DR1 is a repressor that interacts with the TATA-binding protein (TBP) of TFIID and prevents the formation of an active transcription complex by precluding the entry of TFIIA and/or TFIIB into the preinitiation complex. The protein encoded by this gene is a corepressor of transcription that interacts with DR1 to enhance DR1-mediated repression. The interaction between this corepressor and DR1 is required for corepressor function and appears to stabilize the TBP-DR1-DNA complex.[2]

Interactions

DRAP1 has been shown to interact with FOXH1[3] and DR1.[4][5]

References

  1. ↑ Mermelstein F, Yeung K, Cao J, Inostroza JA, Erdjument-Bromage H, Eagelson K, Landsman D, Levitt P, Tempst P, Reinberg D (May 1996). "Requirement of a corepressor for Dr1-mediated repression of transcription". Genes Dev. 10 (8): 1033–48. doi:10.1101/gad.10.8.1033. PMID 8608938.
  2. ↑ 2.0 2.1 "Entrez Gene: DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha)".
  3. ↑ Iratni, Rabah; Yan Yu-Ting; Chen Canhe; Ding Jixiang; Zhang Yi; Price Sandy M; Reinberg Danny; Shen Michael M (Dec 2002). "Inhibition of excess nodal signaling during mouse gastrulation by the transcriptional corepressor DRAP1". Science. United States. 298 (5600): 1996–9. doi:10.1126/science.1073405. PMID 12471260.
  4. ↑ Mermelstein, F; Yeung K; Cao J; Inostroza J A; Erdjument-Bromage H; Eagelson K; Landsman D; Levitt P; Tempst P; Reinberg D (Apr 1996). "Requirement of a corepressor for Dr1-mediated repression of transcription". Genes Dev. UNITED STATES. 10 (8): 1033–48. doi:10.1101/gad.10.8.1033. ISSN 0890-9369. PMID 8608938.
  5. ↑ Yeung, K; Kim S; Reinberg D (Jan 1997). "Functional dissection of a human Dr1-DRAP1 repressor complex". Mol. Cell. Biol. UNITED STATES. 17 (1): 36–45. ISSN 0270-7306. PMC 231727. PMID 8972183.

Further reading



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