BANP: Difference between revisions

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{{Infobox_gene}}
{{PBB_Controls
'''Protein BANP''' is a [[protein]] that in humans is encoded by the ''BANP'' [[gene]].<ref name="pmid10940556">{{cite journal | vauthors = Birot A, Duret L, Bartholin L, Santalucia B, Tigaud I, Magaud J, Rouault J | title = Identification and molecular analysis of BANP | journal = Gene | volume = 253 | issue = 2 | pages = 189–96 | date = Aug 2000 | pmid = 10940556 | pmc =  | doi = 10.1016/S0378-1119(00)00244-4 }}</ref><ref name="pmid10950932">{{cite journal | vauthors = Chattopadhyay S, Kaul R, Charest A, Housman D, Chen J | title = SMAR1, a novel, alternatively spliced gene product, binds the Scaffold/Matrix-associated region at the T cell receptor beta locus | journal = Genomics | volume = 68 | issue = 1 | pages = 93–6 | date = Aug 2000 | pmid = 10950932 | pmc = | doi = 10.1006/geno.2000.6279 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: BANP BTG3 associated nuclear protein| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=54971| accessdate = }}</ref> It is a member of the human gene family, "[[BEN domain|BEN-domain]] containing", which includes eight other genes: [[BEND2 (protein)|BEND2]], BEND3, BEND4, BEND5, BEND6, BEND7, [[NACC1]] (BEND8), and NACC2 (BEND9).
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<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
== Function ==
{{GNF_Protein_box
| image =
| image_source =
| PDB =
| Name = BTG3 associated nuclear protein
| HGNCid = 13450
| Symbol = BANP
| AltSymbols =; DKFZp761H172; FLJ10177; FLJ20538; SMAR1; SMARBP1
| OMIM = 
| ECnumber = 
| Homologene = 9635
| MGIid = 1889023
| Function =  
| Component =
| Process =
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 54971
    | Hs_Ensembl = 
    | Hs_RefseqProtein = NP_060339
    | Hs_RefseqmRNA = NM_017869
    | Hs_GenLoc_db = 
    | Hs_GenLoc_chr = 
    | Hs_GenLoc_start = 
    | Hs_GenLoc_end = 
    | Hs_Uniprot = 
    | Mm_EntrezGene = 53325
    | Mm_Ensembl = ENSMUSG00000025316
    | Mm_RefseqmRNA = NM_016812
    | Mm_RefseqProtein = NP_058092
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 8
    | Mm_GenLoc_start = 124836637
    | Mm_GenLoc_end = 124912029
    | Mm_Uniprot = 
  }}
}}
'''BTG3 associated nuclear protein''', also known as '''BANP''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: BANP BTG3 associated nuclear protein| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=54971| accessdate = }}</ref>


<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
This gene encodes a protein that binds to matrix attachment regions. The protein functions as a [[tumor suppressor]] and [[cell cycle]] regulator. Alternate transcriptional splice variants, encoding different isoforms, have been characterized.<ref name="entrez" />
{{PBB_Summary
| section_title =
| summary_text = This gene encodes a protein that binds to matrix attachment regions. The protein functions as a tumor suppressor and cell cycle regulator. Alternate transcriptional splice variants, encoding different isoforms, have been characterized.<ref name="entrez">{{cite web | title = Entrez Gene: BANP BTG3 associated nuclear protein| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=54971| accessdate = }}</ref>
}}


==References==
== References ==
{{reflist|2}}
{{reflist}}
==Further reading==
 
==External links==
* {{UCSC gene info|BANP}}
 
== Further reading ==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading
* {{cite journal | vauthors = Hillier LD, Lennon G, Becker M, Bonaldo MF, Chiapelli B, Chissoe S, Dietrich N, DuBuque T, Favello A, Gish W, Hawkins M, Hultman M, Kucaba T, Lacy M, Le M, Le N, Mardis E, Moore B, Morris M, Parsons J, Prange C, Rifkin L, Rohlfing T, Schellenberg K, Bento Soares M, Tan F, Thierry-Meg J, Trevaskis E, Underwood K, Wohldman P, Waterston R, Wilson R, Marra M | title = Generation and analysis of 280,000 human expressed sequence tags | journal = Genome Research | volume = 6 | issue = 9 | pages = 807–28 | date = Sep 1996 | pmid = 8889549 | doi = 10.1101/gr.6.9.807 }}
| citations =
* {{cite journal | vauthors = Kaul R, Mukherjee S, Ahmed F, Bhat MK, Chhipa R, Galande S, Chattopadhyay S | title = Direct interaction with and activation of p53 by SMAR1 retards cell-cycle progression at G2/M phase and delays tumor growth in mice | journal = International Journal of Cancer | volume = 103 | issue = 5 | pages = 606–15 | date = Feb 2003 | pmid = 12494467 | doi = 10.1002/ijc.10881 }}
*{{cite journal | author=Hillier LD, Lennon G, Becker M, ''et al.'' |title=Generation and analysis of 280,000 human expressed sequence tags. |journal=Genome Res. |volume=6 |issue= 9 |pages= 807-28 |year= 1997 |pmid= 8889549 |doi=  }}
* {{cite journal | vauthors = Brandenberger R, Wei H, Zhang S, Lei S, Murage J, Fisk GJ, Li Y, Xu C, Fang R, Guegler K, Rao MS, Mandalam R, Lebkowski J, Stanton LW | title = Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation | journal = Nature Biotechnology | volume = 22 | issue = 6 | pages = 707–16 | date = Jun 2004 | pmid = 15146197 | doi = 10.1038/nbt971 }}
*{{cite journal  | author=Birot A, Duret L, Bartholin L, ''et al.'' |title=Identification and molecular analysis of BANP. |journal=Gene |volume=253 |issue= 2 |pages= 189-96 |year= 2000 |pmid= 10940556 |doi=  }}
* {{cite journal | vauthors = Kaul-Ghanekar R, Jalota A, Pavithra L, Tucker P, Chattopadhyay S | title = SMAR1 and Cux/CDP modulate chromatin and act as negative regulators of the TCRbeta enhancer (Ebeta) | journal = Nucleic Acids Research | volume = 32 | issue = 16 | pages = 4862–75 | year = 2004 | pmid = 15371550 | pmc = 519105 | doi = 10.1093/nar/gkh807 }}
*{{cite journal  | author=Chattopadhyay S, Kaul R, Charest A, ''et al.'' |title=SMAR1, a novel, alternatively spliced gene product, binds the Scaffold/Matrix-associated region at the T cell receptor beta locus. |journal=Genomics |volume=68 |issue= 1 |pages= 93-6 |year= 2001 |pmid= 10950932 |doi= 10.1006/geno.2000.6279 }}
* {{cite journal | vauthors = Kaul-Ghanekar R, Majumdar S, Jalota A, Gulati N, Dubey N, Saha B, Chattopadhyay S | title = Abnormal V(D)J recombination of T cell receptor beta locus in SMAR1 transgenic mice | journal = The Journal of Biological Chemistry | volume = 280 | issue = 10 | pages = 9450–9 | date = Mar 2005 | pmid = 15623522 | doi = 10.1074/jbc.M412206200 }}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
* {{cite journal | vauthors = Jalota A, Singh K, Pavithra L, Kaul-Ghanekar R, Jameel S, Chattopadhyay S | title = Tumor suppressor SMAR1 activates and stabilizes p53 through its arginine-serine-rich motif | journal = The Journal of Biological Chemistry | volume = 280 | issue = 16 | pages = 16019–29 | date = Apr 2005 | pmid = 15701641 | doi = 10.1074/jbc.M413200200 }}
*{{cite journal | author=Kaul R, Mukherjee S, Ahmed F, ''et al.'' |title=Direct interaction with and activation of p53 by SMAR1 retards cell-cycle progression at G2/M phase and delays tumor growth in mice. |journal=Int. J. Cancer |volume=103 |issue= 5 |pages= 606-15 |year= 2003 |pmid= 12494467 |doi= 10.1002/ijc.10881 }}
* {{cite journal | vauthors = Rampalli S, Pavithra L, Bhatt A, Kundu TK, Chattopadhyay S | title = Tumor suppressor SMAR1 mediates cyclin D1 repression by recruitment of the SIN3/histone deacetylase 1 complex | journal = Molecular and Cellular Biology | volume = 25 | issue = 19 | pages = 8415–29 | date = Oct 2005 | pmid = 16166625 | pmc = 1265755 | doi = 10.1128/MCB.25.19.8415-8429.2005 }}
*{{cite journal | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
* {{cite journal | vauthors = Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M | title = Towards a proteome-scale map of the human protein-protein interaction network | journal = Nature | volume = 437 | issue = 7062 | pages = 1173–8 | date = Oct 2005 | pmid = 16189514 | doi = 10.1038/nature04209 }}
*{{cite journal  | author=Brandenberger R, Wei H, Zhang S, ''et al.'' |title=Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. |journal=Nat. Biotechnol. |volume=22 |issue= 6 |pages= 707-16 |year= 2005 |pmid= 15146197 |doi= 10.1038/nbt971 }}
* {{cite journal | vauthors = Kimura K, Wakamatsu A, Suzuki Y, Ota T, Nishikawa T, Yamashita R, Yamamoto J, Sekine M, Tsuritani K, Wakaguri H, Ishii S, Sugiyama T, Saito K, Isono Y, Irie R, Kushida N, Yoneyama T, Otsuka R, Kanda K, Yokoi T, Kondo H, Wagatsuma M, Murakawa K, Ishida S, Ishibashi T, Takahashi-Fujii A, Tanase T, Nagai K, Kikuchi H, Nakai K, Isogai T, Sugano S | title = Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes | journal = Genome Research | volume = 16 | issue = 1 | pages = 55–65 | date = Jan 2006 | pmid = 16344560 | pmc = 1356129 | doi = 10.1101/gr.4039406 }}
*{{cite journal | author=Kaul-Ghanekar R, Jalota A, Pavithra L, ''et al.'' |title=SMAR1 and Cux/CDP modulate chromatin and act as negative regulators of the TCRbeta enhancer (Ebeta). |journal=Nucleic Acids Res. |volume=32 |issue= 16 |pages= 4862-75 |year= 2004 |pmid= 15371550 |doi= 10.1093/nar/gkh807 }}
*{{cite journal | author=Kaul-Ghanekar R, Majumdar S, Jalota A, ''et al.'' |title=Abnormal V(D)J recombination of T cell receptor beta locus in SMAR1 transgenic mice. |journal=J. Biol. Chem. |volume=280 |issue= 10 |pages= 9450-9 |year= 2005 |pmid= 15623522 |doi= 10.1074/jbc.M412206200 }}
*{{cite journal | author=Jalota A, Singh K, Pavithra L, ''et al.'' |title=Tumor suppressor SMAR1 activates and stabilizes p53 through its arginine-serine-rich motif. |journal=J. Biol. Chem. |volume=280 |issue= 16 |pages= 16019-29 |year= 2005 |pmid= 15701641 |doi= 10.1074/jbc.M413200200 }}
*{{cite journal | author=Rampalli S, Pavithra L, Bhatt A, ''et al.'' |title=Tumor suppressor SMAR1 mediates cyclin D1 repression by recruitment of the SIN3/histone deacetylase 1 complex. |journal=Mol. Cell. Biol. |volume=25 |issue= 19 |pages= 8415-29 |year= 2005 |pmid= 16166625 |doi= 10.1128/MCB.25.19.8415-8429.2005 }}
*{{cite journal | author=Rual JF, Venkatesan K, Hao T, ''et al.'' |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173-8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
*{{cite journal | author=Kimura K, Wakamatsu A, Suzuki Y, ''et al.'' |title=Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. |journal=Genome Res. |volume=16 |issue= 1 |pages= 55-65 |year= 2006 |pmid= 16344560 |doi= 10.1101/gr.4039406 }}
}}
{{refend}}
{{refend}}


{{protein-stub}}
{{protein-stub}}
{{WikiDoc Sources}}

Latest revision as of 21:55, 25 November 2017

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Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez

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Ensembl

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UniProt

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RefSeq (mRNA)

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RefSeq (protein)

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Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Protein BANP is a protein that in humans is encoded by the BANP gene.[1][2][3] It is a member of the human gene family, "BEN-domain containing", which includes eight other genes: BEND2, BEND3, BEND4, BEND5, BEND6, BEND7, NACC1 (BEND8), and NACC2 (BEND9).

Function

This gene encodes a protein that binds to matrix attachment regions. The protein functions as a tumor suppressor and cell cycle regulator. Alternate transcriptional splice variants, encoding different isoforms, have been characterized.[3]

References

  1. ↑ Birot A, Duret L, Bartholin L, Santalucia B, Tigaud I, Magaud J, Rouault J (Aug 2000). "Identification and molecular analysis of BANP". Gene. 253 (2): 189–96. doi:10.1016/S0378-1119(00)00244-4. PMID 10940556.
  2. ↑ Chattopadhyay S, Kaul R, Charest A, Housman D, Chen J (Aug 2000). "SMAR1, a novel, alternatively spliced gene product, binds the Scaffold/Matrix-associated region at the T cell receptor beta locus". Genomics. 68 (1): 93–6. doi:10.1006/geno.2000.6279. PMID 10950932.
  3. ↑ 3.0 3.1 "Entrez Gene: BANP BTG3 associated nuclear protein".

External links

Further reading


Retrieved from "https://www.wikidoc.org/index.php?title=BANP&oldid=1417415"