GCM1: Difference between revisions

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Revision as of 18:26, 4 December 2017

Chorion-specific transcription factor GCMa is a protein that, in humans, is encoded by the GCM1 gene.^[1]^[2]

This gene encodes a DNA-binding protein with a gcm-motif (glial cell missing motif). The encoded protein is a homolog of the Drosophila glial cells missing gene (gcm). This protein binds to the GCM-motif (A/G)CCCGCAT, a novel sequence among known targets of DNA-binding proteins. The N-terminal DNA-binding domain confers the unique DNA-binding activity of this protein.^[2]

References

↑ Akiyama Y, Hosoya T, Poole AM, Hotta Y (Jan 1997). "The gcm-motif: a novel DNA-binding motif conserved in Drosophila and mammals". Proc Natl Acad Sci U S A. 93 (25): 14912–6. doi:10.1073/pnas.93.25.14912. PMC 26236. PMID 8962155.
↑ ^2.0 ^2.1 "Entrez Gene: GCM1 glial cells missing homolog 1 (Drosophila)".

Yamada K, Ogawa H, Honda S, et al. (1999). "A GCM motif protein is involved in placenta-specific expression of human aromatase gene". J. Biol. Chem. 274 (45): 32279–86. doi:10.1074/jbc.274.45.32279. PMID 10542267.
Nait-Oumesmar B, Copperman AB, Lazzarini RA (2000). "Placental expression and chromosomal localization of the human Gcm 1 gene". J. Histochem. Cytochem. 48 (7): 915–22. doi:10.1177/002215540004800704. PMID 10858268.
Yamada K, Ogawa H, Tamiya G, et al. (2001). "Genomic organization, chromosomal localization, and the complete 22 kb DNA sequence of the human GCMa/GCM1, a placenta-specific transcription factor gene". Biochem. Biophys. Res. Commun. 278 (1): 134–9. doi:10.1006/bbrc.2000.3775. PMID 11071865.
Yu C, Shen K, Lin M, et al. (2003). "GCMa regulates the syncytin-mediated trophoblastic fusion". J. Biol. Chem. 277 (51): 50062–8. doi:10.1074/jbc.M209316200. PMID 12397062.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Mungall AJ, Palmer SA, Sims SK, et al. (2003). "The DNA sequence and analysis of human chromosome 6". Nature. 425 (6960): 805–11. doi:10.1038/nature02055. PMID 14574404.
Chen CP, Chen CY, Yang YC, et al. (2005). "Decreased placental GCM1 (glial cells missing) gene expression in pre-eclampsia". Placenta. 25 (5): 413–21. doi:10.1016/j.placenta.2003.10.014. PMID 15081636.
Baczyk D, Satkunaratnam A, Nait-Oumesmar B, et al. (2004). "Complex patterns of GCM1 mRNA and protein in villous and extravillous trophoblast cells of the human placenta". Placenta. 25 (6): 553–9. doi:10.1016/j.placenta.2003.12.004. PMID 15135239.
Schubert SW, Kardash E, Khan MA, et al. (2005). "Interaction, cooperative promoter modulation, and renal colocalization of GCMa and Pitx2". J. Biol. Chem. 279 (48): 50358–65. doi:10.1074/jbc.M404587200. PMID 15385555.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Yang CS, Yu C, Chuang HC, et al. (2005). "FBW2 targets GCMa to the ubiquitin-proteasome degradation system". J. Biol. Chem. 280 (11): 10083–90. doi:10.1074/jbc.M413986200. PMID 15640526.
Knerr I, Schubert SW, Wich C, et al. (2005). "Stimulation of GCMa and syncytin via cAMP mediated PKA signaling in human trophoblastic cells under normoxic and hypoxic conditions". FEBS Lett. 579 (18): 3991–8. doi:10.1016/j.febslet.2005.06.029. PMID 16004993.
Chang CW, Chuang HC, Yu C, et al. (2005). "Stimulation of GCMa transcriptional activity by cyclic AMP/protein kinase A signaling is attributed to CBP-mediated acetylation of GCMa". Mol. Cell. Biol. 25 (19): 8401–14. doi:10.1128/MCB.25.19.8401-8414.2005. PMC 1265739. PMID 16166624.
Chuang HC, Chang CW, Chang GD, et al. (2006). "Histone deacetylase 3 binds to and regulates the GCMa transcription factor". Nucleic Acids Res. 34 (5): 1459–69. doi:10.1093/nar/gkl048. PMC 1401512. PMID 16528103.
Fujito N, Samura O, Miharu N, et al. (2007). "Increased plasma mRNAs of placenta-specific 1 (PLAC1) and glial cells-missing 1 (GCM1) in mothers with pre-eclampsia". Hiroshima J. Med. Sci. 55 (1): 9–15. PMID 16594548.
Chou CC, Chang C, Liu JH, et al. (2007). "Small ubiquitin-like modifier modification regulates the DNA binding activity of glial cell missing Drosophila homolog a.". J. Biol. Chem. 282 (37): 27239–49. doi:10.1074/jbc.M700351200. PMID 17646165.

This article on a gene on human chromosome 6 is a stub. You can help Wikipedia by expanding it.

[pmid8962155-1] Akiyama Y, Hosoya T, Poole AM, Hotta Y (Jan 1997). "The gcm-motif: a novel DNA-binding motif conserved in Drosophila and mammals". Proc Natl Acad Sci U S A. 93 (25): 14912–6. doi:10.1073/pnas.93.25.14912. PMC 26236. PMID 8962155.

[entrez-2] 2.0 ^2.1 "Entrez Gene: GCM1 glial cells missing homolog 1 (Drosophila)".

[1]

[2]

@@ Line 1: / Line 1: @@
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+{{Underlinked|date=October 2016}}
-{{PBB_Controls
+{{Infobox_gene}}
-| update_page = yes
+'''Chorion-specific transcription factor GCMa''' is a [[protein]] that, in [[Human|humans]], is encoded by the ''GCM1'' [[gene]].<ref name="pmid8962155">{{cite journal |vauthors=Akiyama Y, Hosoya T, Poole AM, Hotta Y | title = The gcm-motif: a novel DNA-binding motif conserved in Drosophila and mammals | journal = Proc Natl Acad Sci U S A | volume = 93 | issue = 25 | pages = 14912–6 |date=Jan 1997 | pmid = 8962155 | pmc = 26236 | doi =10.1073/pnas.93.25.14912  }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: GCM1 glial cells missing homolog 1 (Drosophila)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=8521| accessdate = }}</ref>
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-{{GNF_Protein_box
- | image = PBB_Protein_GCM1_image.jpg
- | image_source = [[Protein_Data_Bank|PDB]] rendering based on 1odh.
- | PDB = {{PDB2|1odh}}
- | Name = Glial cells missing homolog 1 (Drosophila)
- | HGNCid = 4197
- | Symbol = GCM1
- | AltSymbols =; GCMA; hGCMa
- | OMIM = 603715
- | ECnumber =
- | Homologene = 2702
- | MGIid = 108045
- | GeneAtlas_image1 = PBB_GE_GCM1_206269_at_tn.png
- | Function = {{GNF_GO|id=GO:0003700 |text = transcription factor activity}} {{GNF_GO|id=GO:0008134 |text = transcription factor binding}} {{GNF_GO|id=GO:0008270 |text = zinc ion binding}} {{GNF_GO|id=GO:0046872 |text = metal ion binding}}
- | Component = {{GNF_GO|id=GO:0005634 |text = nucleus}} {{GNF_GO|id=GO:0005667 |text = transcription factor complex}}
- | Process = {{GNF_GO|id=GO:0006350 |text = transcription}} {{GNF_GO|id=GO:0006355 |text = regulation of transcription, DNA-dependent}} {{GNF_GO|id=GO:0007275 |text = multicellular organismal development}} {{GNF_GO|id=GO:0009653 |text = anatomical structure morphogenesis}}
- | Orthologs = {{GNF_Ortholog_box
-    | Hs_EntrezGene = 8521
-    | Hs_Ensembl = ENSG00000137270
-    | Hs_RefseqProtein = NP_003634
-    | Hs_RefseqmRNA = NM_003643
-    | Hs_GenLoc_db =
-    | Hs_GenLoc_chr = 6
-    | Hs_GenLoc_start = 53099721
-    | Hs_GenLoc_end = 53121586
-    | Hs_Uniprot = Q9NP62
-    | Mm_EntrezGene = 14531
-    | Mm_Ensembl = ENSMUSG00000023333
-    | Mm_RefseqmRNA = NM_008103
-    | Mm_RefseqProtein = NP_032129
-    | Mm_GenLoc_db =
-    | Mm_GenLoc_chr = 9
-    | Mm_GenLoc_start = 77837642
-    | Mm_GenLoc_end = 77851322
-    | Mm_Uniprot = Q3UQD1
-  }}
-}}
-'''Glial cells missing homolog 1 (Drosophila)''', also known as '''GCM1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: GCM1 glial cells missing homolog 1 (Drosophila)| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=8521| accessdate = }}</ref>
 <!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
 {{PBB_Summary
 | section_title =
-| summary_text = This gene encodes a DNA-binding protein with a gcm-motif (glial cell missing motif). The encoded protein is a homolog of the Drosophila glial cells missing gene (gcm). This protein binds to the GCM-motif (A/G)CCCGCAT, a novel sequence among known targets of DNA-binding proteins. The N-terminal DNA-binding domain confers the unique DNA-binding activity of this protein.<ref name="entrez">{{cite web | title = Entrez Gene: GCM1 glial cells missing homolog 1 (Drosophila)| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=8521| accessdate = }}</ref>
+| summary_text = This gene encodes a DNA-binding protein with a gcm-motif (glial cell missing motif). The encoded protein is a homolog of the Drosophila glial cells missing gene (gcm). This protein binds to the GCM-motif (A/G)CCCGCAT, a novel sequence among known targets of DNA-binding proteins. The N-terminal DNA-binding domain confers the unique DNA-binding activity of this protein.<ref name="entrez">{{cite web | title = Entrez Gene: GCM1 glial cells missing homolog 1 (Drosophila)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=8521| accessdate = }}</ref>
 }}
 ==References==
-{{reflist|2}}
+{{reflist}}
 ==Further reading==
 {{refbegin | 2}}
 {{PBB_Further_reading
 | citations =
-*{{cite journal  | author=Akiyama Y, Hosoya T, Poole AM, Hotta Y |title=The gcm-motif: a novel DNA-binding motif conserved in Drosophila and mammals. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=93 |issue= 25 |pages= 14912-6 |year= 1997 |pmid= 8962155 |doi=  }}
+*{{cite journal  |vauthors=Yamada K, Ogawa H, Honda S |title=A GCM motif protein is involved in placenta-specific expression of human aromatase gene. |journal=J. Biol. Chem. |volume=274 |issue= 45 |pages= 32279–86 |year= 1999 |pmid= 10542267 |doi=10.1074/jbc.274.45.32279  |display-authors=etal}}
-*{{cite journal  | author=Yamada K, Ogawa H, Honda S, ''et al.'' |title=A GCM motif protein is involved in placenta-specific expression of human aromatase gene. |journal=J. Biol. Chem. |volume=274 |issue= 45 |pages= 32279-86 |year= 1999 |pmid= 10542267 |doi=  }}
+*{{cite journal  |vauthors=Nait-Oumesmar B, Copperman AB, Lazzarini RA |title=Placental expression and chromosomal localization of the human Gcm 1 gene. |journal=J. Histochem. Cytochem. |volume=48 |issue= 7 |pages= 915–22 |year= 2000 |pmid= 10858268 |doi=  10.1177/002215540004800704}}
-*{{cite journal  | author=Nait-Oumesmar B, Copperman AB, Lazzarini RA |title=Placental expression and chromosomal localization of the human Gcm 1 gene. |journal=J. Histochem. Cytochem. |volume=48 |issue= 7 |pages= 915-22 |year= 2000 |pmid= 10858268 |doi=  }}
+*{{cite journal  |vauthors=Yamada K, Ogawa H, Tamiya G |title=Genomic organization, chromosomal localization, and the complete 22 kb DNA sequence of the human GCMa/GCM1, a placenta-specific transcription factor gene. |journal=Biochem. Biophys. Res. Commun. |volume=278 |issue= 1 |pages= 134–9 |year= 2001 |pmid= 11071865 |doi= 10.1006/bbrc.2000.3775 |display-authors=etal}}
-*{{cite journal  | author=Yamada K, Ogawa H, Tamiya G, ''et al.'' |title=Genomic organization, chromosomal localization, and the complete 22 kb DNA sequence of the human GCMa/GCM1, a placenta-specific transcription factor gene. |journal=Biochem. Biophys. Res. Commun. |volume=278 |issue= 1 |pages= 134-9 |year= 2001 |pmid= 11071865 |doi= 10.1006/bbrc.2000.3775 }}
+*{{cite journal  |vauthors=Yu C, Shen K, Lin M |title=GCMa regulates the syncytin-mediated trophoblastic fusion. |journal=J. Biol. Chem. |volume=277 |issue= 51 |pages= 50062–8 |year= 2003 |pmid= 12397062 |doi= 10.1074/jbc.M209316200 |display-authors=etal}}
-*{{cite journal  | author=Yu C, Shen K, Lin M, ''et al.'' |title=GCMa regulates the syncytin-mediated trophoblastic fusion. |journal=J. Biol. Chem. |volume=277 |issue= 51 |pages= 50062-8 |year= 2003 |pmid= 12397062 |doi= 10.1074/jbc.M209316200 }}
+*{{cite journal  |vauthors=Strausberg RL, Feingold EA, Grouse LH |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 |display-authors=etal}}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
+*{{cite journal  |vauthors=Mungall AJ, Palmer SA, Sims SK |title=The DNA sequence and analysis of human chromosome 6. |journal=Nature |volume=425 |issue= 6960 |pages= 805–11 |year= 2003 |pmid= 14574404 |doi= 10.1038/nature02055 |display-authors=etal}}
-*{{cite journal  | author=Mungall AJ, Palmer SA, Sims SK, ''et al.'' |title=The DNA sequence and analysis of human chromosome 6. |journal=Nature |volume=425 |issue= 6960 |pages= 805-11 |year= 2003 |pmid= 14574404 |doi= 10.1038/nature02055 }}
+*{{cite journal  |vauthors=Chen CP, Chen CY, Yang YC |title=Decreased placental GCM1 (glial cells missing) gene expression in pre-eclampsia. |journal=Placenta |volume=25 |issue= 5 |pages= 413–21 |year= 2005 |pmid= 15081636 |doi= 10.1016/j.placenta.2003.10.014 |display-authors=etal}}
-*{{cite journal  | author=Chen CP, Chen CY, Yang YC, ''et al.'' |title=Decreased placental GCM1 (glial cells missing) gene expression in pre-eclampsia. |journal=Placenta |volume=25 |issue= 5 |pages= 413-21 |year= 2005 |pmid= 15081636 |doi= 10.1016/j.placenta.2003.10.014 }}
+*{{cite journal  |vauthors=Baczyk D, Satkunaratnam A, Nait-Oumesmar B |title=Complex patterns of GCM1 mRNA and protein in villous and extravillous trophoblast cells of the human placenta. |journal=Placenta |volume=25 |issue= 6 |pages= 553–9 |year= 2004 |pmid= 15135239 |doi= 10.1016/j.placenta.2003.12.004 |display-authors=etal}}
-*{{cite journal  | author=Baczyk D, Satkunaratnam A, Nait-Oumesmar B, ''et al.'' |title=Complex patterns of GCM1 mRNA and protein in villous and extravillous trophoblast cells of the human placenta. |journal=Placenta |volume=25 |issue= 6 |pages= 553-9 |year= 2004 |pmid= 15135239 |doi= 10.1016/j.placenta.2003.12.004 }}
+*{{cite journal  |vauthors=Schubert SW, Kardash E, Khan MA |title=Interaction, cooperative promoter modulation, and renal colocalization of GCMa and Pitx2. |journal=J. Biol. Chem. |volume=279 |issue= 48 |pages= 50358–65 |year= 2005 |pmid= 15385555 |doi= 10.1074/jbc.M404587200 |display-authors=etal}}
-*{{cite journal  | author=Schubert SW, Kardash E, Khan MA, ''et al.'' |title=Interaction, cooperative promoter modulation, and renal colocalization of GCMa and Pitx2. |journal=J. Biol. Chem. |volume=279 |issue= 48 |pages= 50358-65 |year= 2005 |pmid= 15385555 |doi= 10.1074/jbc.M404587200 }}
+*{{cite journal  |vauthors=Gerhard DS, Wagner L, Feingold EA |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504  | pmc=528928 |display-authors=etal}}
-*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
+*{{cite journal  |vauthors=Yang CS, Yu C, Chuang HC |title=FBW2 targets GCMa to the ubiquitin-proteasome degradation system. |journal=J. Biol. Chem. |volume=280 |issue= 11 |pages= 10083–90 |year= 2005 |pmid= 15640526 |doi= 10.1074/jbc.M413986200 |display-authors=etal}}
-*{{cite journal  | author=Yang CS, Yu C, Chuang HC, ''et al.'' |title=FBW2 targets GCMa to the ubiquitin-proteasome degradation system. |journal=J. Biol. Chem. |volume=280 |issue= 11 |pages= 10083-90 |year= 2005 |pmid= 15640526 |doi= 10.1074/jbc.M413986200 }}
+*{{cite journal  |vauthors=Knerr I, Schubert SW, Wich C |title=Stimulation of GCMa and syncytin via cAMP mediated PKA signaling in human trophoblastic cells under normoxic and hypoxic conditions. |journal=FEBS Lett. |volume=579 |issue= 18 |pages= 3991–8 |year= 2005 |pmid= 16004993 |doi= 10.1016/j.febslet.2005.06.029 |display-authors=etal}}
-*{{cite journal  | author=Knerr I, Schubert SW, Wich C, ''et al.'' |title=Stimulation of GCMa and syncytin via cAMP mediated PKA signaling in human trophoblastic cells under normoxic and hypoxic conditions. |journal=FEBS Lett. |volume=579 |issue= 18 |pages= 3991-8 |year= 2005 |pmid= 16004993 |doi= 10.1016/j.febslet.2005.06.029 }}
+*{{cite journal  |vauthors=Chang CW, Chuang HC, Yu C |title=Stimulation of GCMa transcriptional activity by cyclic AMP/protein kinase A signaling is attributed to CBP-mediated acetylation of GCMa. |journal=Mol. Cell. Biol. |volume=25 |issue= 19 |pages= 8401–14 |year= 2005 |pmid= 16166624 |doi= 10.1128/MCB.25.19.8401-8414.2005  | pmc=1265739 |display-authors=etal}}
-*{{cite journal  | author=Chang CW, Chuang HC, Yu C, ''et al.'' |title=Stimulation of GCMa transcriptional activity by cyclic AMP/protein kinase A signaling is attributed to CBP-mediated acetylation of GCMa. |journal=Mol. Cell. Biol. |volume=25 |issue= 19 |pages= 8401-14 |year= 2005 |pmid= 16166624 |doi= 10.1128/MCB.25.19.8401-8414.2005 }}
+*{{cite journal  |vauthors=Chuang HC, Chang CW, Chang GD |title=Histone deacetylase 3 binds to and regulates the GCMa transcription factor. |journal=Nucleic Acids Res. |volume=34 |issue= 5 |pages= 1459–69 |year= 2006 |pmid= 16528103 |doi= 10.1093/nar/gkl048  | pmc=1401512 |display-authors=etal}}
-*{{cite journal  | author=Chuang HC, Chang CW, Chang GD, ''et al.'' |title=Histone deacetylase 3 binds to and regulates the GCMa transcription factor. |journal=Nucleic Acids Res. |volume=34 |issue= 5 |pages= 1459-69 |year= 2006 |pmid= 16528103 |doi= 10.1093/nar/gkl048 }}
+*{{cite journal  |vauthors=Fujito N, Samura O, Miharu N |title=Increased plasma mRNAs of placenta-specific 1 (PLAC1) and glial cells-missing 1 (GCM1) in mothers with pre-eclampsia. |journal=Hiroshima J. Med. Sci. |volume=55 |issue= 1 |pages= 9–15 |year= 2007 |pmid= 16594548 |doi=  |display-authors=etal}}
-*{{cite journal  | author=Fujito N, Samura O, Miharu N, ''et al.'' |title=Increased plasma mRNAs of placenta-specific 1 (PLAC1) and glial cells-missing 1 (GCM1) in mothers with pre-eclampsia. |journal=Hiroshima J. Med. Sci. |volume=55 |issue= 1 |pages= 9-15 |year= 2007 |pmid= 16594548 |doi=  }}
+*{{cite journal  |vauthors=Chou CC, Chang C, Liu JH |title=Small ubiquitin-like modifier modification regulates the DNA binding activity of glial cell missing Drosophila homolog a. |journal=J. Biol. Chem. |volume=282 |issue= 37 |pages= 27239–49 |year= 2007 |pmid= 17646165 |doi= 10.1074/jbc.M700351200 |display-authors=etal}}
-*{{cite journal  | author=Chou CC, Chang C, Liu JH, ''et al.'' |title=Small ubiquitin-like modifier modification regulates the DNA binding activity of glial cell missing Drosophila homolog a. |journal=J. Biol. Chem. |volume=282 |issue= 37 |pages= 27239-49 |year= 2007 |pmid= 17646165 |doi= 10.1074/jbc.M700351200 }}
 }}
 {{refend}}
+{{PDB Gallery|geneid=8521}}
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+| update_page = yes
+| require_manual_inspection = no
+| update_protein_box = yes
+| update_summary = yes
+| update_citations = yes
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+{{gene-6-stub}}
-{{WikiDoc Sources}}

GCM1: Difference between revisions

Revision as of 18:26, 4 December 2017

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