GRHPR: Difference between revisions

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{{Infobox_gene}}
'''Glyoxylate reductase/hydroxypyruvate reductase''' is an [[enzyme]] that in humans is encoded by the ''GRHPR'' [[gene]].<ref name="pmid10524214">{{cite journal |vauthors=Rumsby G, Cregeen DP | title = Identification and expression of a cDNA for human hydroxypyruvate/glyoxylate reductase | journal = Biochim Biophys Acta | volume = 1446 | issue = 3 | pages = 383–8 |date=Nov 1999 | pmid = 10524214 | pmc =  | doi =  10.1016/S0167-4781(99)00105-0}}</ref><ref name="pmid10484776">{{cite journal |vauthors=Cramer SD, Ferree PM, Lin K, Milliner DS, Holmes RP | title = The gene encoding hydroxypyruvate reductase (GRHPR) is mutated in patients with primary hyperoxaluria type II | journal = Hum Mol Genet | volume = 8 | issue = 11 | pages = 2063–9 |date=Dec 1999 | pmid = 10484776 | pmc =  | doi =10.1093/hmg/8.11.2063  }}</ref><ref name="entrez"/>
This gene encodes an [[enzyme]] with [[hydroxypyruvate reductase]], [[glyoxylate reductase]], and D-[[glycerate dehydrogenase]] enzymatic activities. The enzyme has widespread tissue expression and has a role in metabolism. Type II [[hyperoxaluria]] is caused by mutations in this gene.<ref name="entrez">{{cite web | title = Entrez Gene: GRHPR glyoxylate reductase/hydroxypyruvate reductase| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=9380| accessdate = }}</ref> GRHPR mutation analysis needs to pay attention to primer design, because allele dropout can cause false-positive result.<ref name="pmid18982322">{{cite journal |vauthors=Takaoka N, Takayama T, Miyazaki M, Nagata M, Ozono S | title = Modification of primers for GRHPR genotyping: avoiding allele dropout by single nucleotide polymorphisms and homology sequence. | journal = Urol Res. | volume = 36 | issue = 6 | pages = 297–302 |date=Dec 2008 | pmid = 18982322 | pmc =  | doi = 10.1007/s00240-008-0159-z }}</ref>
==References==
{{Reflist}}
==External links==
* [https://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=gene&part=ph2  GeneReviews/NCBI/NIH/UW entry on Primary Hyperoxaluria Type 2]
==Further reading==
{{Refbegin | 2}}
{{PBB_Further_reading
| citations =
*{{Cite journal  |vauthors=Takayama T, Nagata M, Ozono S, etal |title=A novel mutation in the GRHPR gene in a Japanese patient with primary hyperoxaluria type 2 |journal=Nephrol. Dial. Transplant. |volume=22 |issue= 8 |pages= 2371–4 |year= 2007 |pmid= 17510093 |doi= 10.1093/ndt/gfm271  | pmc=2413148 }}
*{{Cite journal  |vauthors=Booth MP, Conners R, Rumsby G, Brady RL |title=Structural basis of substrate specificity in human glyoxylate reductase/hydroxypyruvate reductase |journal=J. Mol. Biol. |volume=360 |issue= 1 |pages= 178–89 |year= 2006 |pmid= 16756993 |doi= 10.1016/j.jmb.2006.05.018 }}
*{{Cite journal  |vauthors=Mehrle A, Rosenfelder H, Schupp I, etal |title=The LIFEdb database in 2006 |journal=Nucleic Acids Res. |volume=34 |issue= Database issue |pages= D415–8 |year= 2006 |pmid= 16381901 |doi= 10.1093/nar/gkj139  | pmc=1347501 }}
*{{Cite journal  |vauthors=Wiemann S, Arlt D, Huber W, etal |title=From ORFeome to Biology: A Functional Genomics Pipeline |journal=Genome Res. |volume=14 |issue= 10B |pages= 2136–44 |year= 2004 |pmid= 15489336 |doi= 10.1101/gr.2576704  | pmc=528930 }}
*{{Cite journal  |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC) |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504  | pmc=528928 }}
*{{Cite journal  |vauthors=Lehner B, Sanderson CM |title=A Protein Interaction Framework for Human mRNA Degradation |journal=Genome Res. |volume=14 |issue= 7 |pages= 1315–23 |year= 2004 |pmid= 15231747 |doi= 10.1101/gr.2122004  | pmc=442147 }}
*{{Cite journal  |vauthors=Ota T, Suzuki Y, Nishikawa T, etal |title=Complete sequencing and characterization of 21,243 full-length human cDNAs |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{Cite journal  |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 }}
*{{Cite journal  |vauthors=Simpson JC, Wellenreuther R, Poustka A, etal |title=Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing |journal=EMBO Rep. |volume=1 |issue= 3 |pages= 287–92 |year= 2001 |pmid= 11256614 |doi= 10.1093/embo-reports/kvd058  | pmc=1083732 }}
*{{Cite journal  |vauthors=Hartley JL, Temple GF, Brasch MA |title=DNA Cloning Using In Vitro Site-Specific Recombination |journal=Genome Res. |volume=10 |issue= 11 |pages= 1788–95 |year= 2001 |pmid= 11076863 |doi=10.1101/gr.143000  | pmc=310948  }}
*{{Cite journal  |vauthors=Webster KE, Ferree PM, Holmes RP, Cramer SD |title=Identification of missense, nonsense, and deletion mutations in the GRHPR gene in patients with primary hyperoxaluria type II (PH2) |journal=Hum. Genet. |volume=107 |issue= 2 |pages= 176–85 |year= 2000 |pmid= 11030416 |doi=10.1007/s004390000351  }}
*{{Cite journal  |vauthors=Huang T, Yang W, Pereira AC, etal |title=Cloning and characterization of a putative human d-2-hydroxyacid dehydrogenase in chromosome 9q |journal=Biochem. Biophys. Res. Commun. |volume=268 |issue= 2 |pages= 298–301 |year= 2000 |pmid= 10679197 |doi= 10.1006/bbrc.2000.2122 }}
}}
{{Refend}}
{{PDB Gallery|geneid=9380}}
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<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{Alcohol oxidoreductases}}
{{GNF_Protein_box
| image = PBB_Protein_GRHPR_image.jpg
| image_source = [[Protein_Data_Bank|PDB]] rendering based on 2gcg.
| PDB = {{PDB2|2gcg}}, {{PDB2|2h1s}}
| Name = Glyoxylate reductase/hydroxypyruvate reductase
| HGNCid = 4570
| Symbol = GRHPR
| AltSymbols =; PH2; GLXR
| OMIM = 604296
| ECnumber = 
| Homologene = 49088
| MGIid = 1923488
| GeneAtlas_image1 = PBB_GE_GRHPR_214864_s_at_tn.png
| GeneAtlas_image2 = PBB_GE_GRHPR_201347_x_at_tn.png
| GeneAtlas_image3 = PBB_GE_GRHPR_216308_x_at_tn.png
| Function = {{GNF_GO|id=GO:0005515 |text = protein binding}} {{GNF_GO|id=GO:0008465 |text = glycerate dehydrogenase activity}} {{GNF_GO|id=GO:0016491 |text = oxidoreductase activity}} {{GNF_GO|id=GO:0016616 |text = oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor}} {{GNF_GO|id=GO:0016618 |text = hydroxypyruvate reductase activity}} {{GNF_GO|id=GO:0030267 |text = glyoxylate reductase (NADP) activity}} {{GNF_GO|id=GO:0051287 |text = NAD binding}}
| Component = {{GNF_GO|id=GO:0005575 |text = cellular_component}} {{GNF_GO|id=GO:0005737 |text = cytoplasm}}
| Process = {{GNF_GO|id=GO:0006118 |text = electron transport}} {{GNF_GO|id=GO:0006564 |text = L-serine biosynthetic process}} {{GNF_GO|id=GO:0007588 |text = excretion}} {{GNF_GO|id=GO:0008152 |text = metabolic process}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 9380
    | Hs_Ensembl = ENSG00000137106
    | Hs_RefseqProtein = NP_036335
    | Hs_RefseqmRNA = NM_012203
    | Hs_GenLoc_db = 
    | Hs_GenLoc_chr = 9
    | Hs_GenLoc_start = 37412663
    | Hs_GenLoc_end = 37426987
    | Hs_Uniprot = Q9UBQ7
    | Mm_EntrezGene = 76238
    | Mm_Ensembl = ENSMUSG00000035637
    | Mm_RefseqmRNA = NM_080289
    | Mm_RefseqProtein = NP_525028
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 4
    | Mm_GenLoc_start = 45002504
    | Mm_GenLoc_end = 45011797
    | Mm_Uniprot = Q3T9Z2
  }}
}}
'''Glyoxylate reductase/hydroxypyruvate reductase''', also known as '''GRHPR''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: GRHPR glyoxylate reductase/hydroxypyruvate reductase| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=9380| accessdate = }}</ref>
 
<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{PBB_Summary
| section_title =
| summary_text = This gene encodes an enzyme with hydroxypyruvate reductase, glyoxylate reductase, and D-glycerate dehydrogenase enzymatic activities. The enzyme has widespread tissue expression and has a role in metabolism. Type II hyperoxaluria is caused by mutations in this gene.<ref name="entrez">{{cite web | title = Entrez Gene: GRHPR glyoxylate reductase/hydroxypyruvate reductase| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=9380| accessdate = }}</ref>
}}


==References==
{{reflist|2}}
==Further reading==
{{refbegin | 2}}
{{PBB_Further_reading
| citations =
*{{cite journal  | author=Takayama T, Nagata M, Ozono S, ''et al.'' |title=A novel mutation in the GRHPR gene in a Japanese patient with primary hyperoxaluria type 2. |journal=Nephrol. Dial. Transplant. |volume=22 |issue= 8 |pages= 2371-4 |year= 2007 |pmid= 17510093 |doi= 10.1093/ndt/gfm271 }}
*{{cite journal  | author=Booth MP, Conners R, Rumsby G, Brady RL |title=Structural basis of substrate specificity in human glyoxylate reductase/hydroxypyruvate reductase. |journal=J. Mol. Biol. |volume=360 |issue= 1 |pages= 178-89 |year= 2006 |pmid= 16756993 |doi= 10.1016/j.jmb.2006.05.018 }}
*{{cite journal  | author=Mehrle A, Rosenfelder H, Schupp I, ''et al.'' |title=The LIFEdb database in 2006. |journal=Nucleic Acids Res. |volume=34 |issue= Database issue |pages= D415-8 |year= 2006 |pmid= 16381901 |doi= 10.1093/nar/gkj139 }}
*{{cite journal  | author=Wiemann S, Arlt D, Huber W, ''et al.'' |title=From ORFeome to biology: a functional genomics pipeline. |journal=Genome Res. |volume=14 |issue= 10B |pages= 2136-44 |year= 2004 |pmid= 15489336 |doi= 10.1101/gr.2576704 }}
*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{cite journal  | author=Lehner B, Sanderson CM |title=A protein interaction framework for human mRNA degradation. |journal=Genome Res. |volume=14 |issue= 7 |pages= 1315-23 |year= 2004 |pmid= 15231747 |doi= 10.1101/gr.2122004 }}
*{{cite journal  | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  | author=Simpson JC, Wellenreuther R, Poustka A, ''et al.'' |title=Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing. |journal=EMBO Rep. |volume=1 |issue= 3 |pages= 287-92 |year= 2001 |pmid= 11256614 |doi= 10.1093/embo-reports/kvd058 }}
*{{cite journal  | author=Hartley JL, Temple GF, Brasch MA |title=DNA cloning using in vitro site-specific recombination. |journal=Genome Res. |volume=10 |issue= 11 |pages= 1788-95 |year= 2001 |pmid= 11076863 |doi=  }}
*{{cite journal  | author=Webster KE, Ferree PM, Holmes RP, Cramer SD |title=Identification of missense, nonsense, and deletion mutations in the GRHPR gene in patients with primary hyperoxaluria type II (PH2). |journal=Hum. Genet. |volume=107 |issue= 2 |pages= 176-85 |year= 2000 |pmid= 11030416 |doi=  }}
*{{cite journal  | author=Huang T, Yang W, Pereira AC, ''et al.'' |title=Cloning and characterization of a putative human d-2-hydroxyacid dehydrogenase in chromosome 9q. |journal=Biochem. Biophys. Res. Commun. |volume=268 |issue= 2 |pages= 298-301 |year= 2000 |pmid= 10679197 |doi= 10.1006/bbrc.2000.2122 }}
*{{cite journal  | author=Rumsby G, Cregeen DP |title=Identification and expression of a cDNA for human hydroxypyruvate/glyoxylate reductase. |journal=Biochim. Biophys. Acta |volume=1446 |issue= 3 |pages= 383-8 |year= 1999 |pmid= 10524214 |doi=  }}
*{{cite journal  | author=Cramer SD, Ferree PM, Lin K, ''et al.'' |title=The gene encoding hydroxypyruvate reductase (GRHPR) is mutated in patients with primary hyperoxaluria type II. |journal=Hum. Mol. Genet. |volume=8 |issue= 11 |pages= 2063-9 |year= 1999 |pmid= 10484776 |doi=  }}
}}
{{refend}}


{{protein-stub}}
{{gene-9-stub}}
{{WikiDoc Sources}}

Latest revision as of 09:05, 31 August 2017

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Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Glyoxylate reductase/hydroxypyruvate reductase is an enzyme that in humans is encoded by the GRHPR gene.[1][2][3]

This gene encodes an enzyme with hydroxypyruvate reductase, glyoxylate reductase, and D-glycerate dehydrogenase enzymatic activities. The enzyme has widespread tissue expression and has a role in metabolism. Type II hyperoxaluria is caused by mutations in this gene.[3] GRHPR mutation analysis needs to pay attention to primer design, because allele dropout can cause false-positive result.[4]

References

  1. Rumsby G, Cregeen DP (Nov 1999). "Identification and expression of a cDNA for human hydroxypyruvate/glyoxylate reductase". Biochim Biophys Acta. 1446 (3): 383–8. doi:10.1016/S0167-4781(99)00105-0. PMID 10524214.
  2. Cramer SD, Ferree PM, Lin K, Milliner DS, Holmes RP (Dec 1999). "The gene encoding hydroxypyruvate reductase (GRHPR) is mutated in patients with primary hyperoxaluria type II". Hum Mol Genet. 8 (11): 2063–9. doi:10.1093/hmg/8.11.2063. PMID 10484776.
  3. 3.0 3.1 "Entrez Gene: GRHPR glyoxylate reductase/hydroxypyruvate reductase".
  4. Takaoka N, Takayama T, Miyazaki M, Nagata M, Ozono S (Dec 2008). "Modification of primers for GRHPR genotyping: avoiding allele dropout by single nucleotide polymorphisms and homology sequence". Urol Res. 36 (6): 297–302. doi:10.1007/s00240-008-0159-z. PMID 18982322.

External links

Further reading