Sandbox Pathogen-Based Infections
- Bacterial Infections
- Gram Positive
- Enterococci
- Enterococcus faecalis
- Enterococcus faecium
- Staphylococci
- Staphylococcus aureus, MRSA
- Staphylococcus aureus, MSSA
- Staphylococcus, Coagulase-negative species
- Staphylococcus epidermidis
- Staphylococcus haemolyticus
- Staphylococcus lugdunensis
- Staphylococcus saprophyticus
- Streptococci
- Streptococcus anginosus group
- Streptococcus pneumoniae
- Streptobacillus moniliformis
- Streptococcus pyogenes
- Streptococcus agalactiae
- Gram-positive bacilli
- Actinomyces israelii
- Arcanobacterium (C.) haemolyticum
- Bacillus species
- Bacillus anthracis
- Bacillus cereus, Bacillus subtilis
- Clostridium species
- Clostridium difficile
- Clostridium perfringens
- Clostridium tetani
- Corynebacterium species
- Corynebacterium diphtheriae
- Corynebacterium jeikeium
- Corynebacterium urealyticum
- Erysipelothrix rhusiopathiae
- Gastroenteritis, Listeria monocytogenes
- Lactobacillus sp.
- Leuconostoc
- Nocardia sp.
- Propionibacterium acnes
- Rhodococcus equi
- Rickettsia
- Coxiella burnetii, Q Fever
- Ehrlichia sp., Anaplasma
- Gram-Negative Cocci & Coccobacilli
- Aggregatibacter aphrophilus
- Brucella sp.
- Haemophilus ducreyi
- Haemophilus influenzae
- Neisseria gonorrhoeae
- Neisseria meningitidis
- Pasteurella multocida
- Eikenella corrodens
- Bordetella pertussis
- Moraxella catarrhalis
- Spirochetes
- Leptospira spp.
- Borrelia sp.
- Treponema pallidum
- Gram-Negative Bacilli
- Enterics
- Aeromonas hydrophila
- Citrobacter koseri (diversus), Citrobacter freundii
- Enterobacter cloacae, Enterobacter aerogenes
- Escherichia coli
- Klebsiella rhinoscleromatis, ozaenae
- Klebsiella pneumoniae
- Morganella morganii
- Morganella sp., Providencia sp.
- Proteus species
- Proteus vulgaris
- Providencia sp.
- Salmonella sp.
- Serratia marcescens
- Shigella sp.
- Campylobacter
- Campylobacter fetus
- Campylobacter jejuni
- Bartonella sp.
- Non-fermenting Gram-negative bacilli
- Acinetobacter baumannii
- Achromobacter xylosoxidans
- Alcaligenes xylosoxidans
- Bordetella pertussis
- Burkholderia cepacia
- Burkholderia pseudomallei (Pseudomonas pseudomallei)
- Stenotrophomonas maltophilia
- Elizabethkingia (Chryseobacterium) meningoseptica
- Moraxella catarrhalis
- Pseudomonas aeruginosa
- Capnocytophaga sp.
- Francisella tularensis
- Helicobacter pylori
- Legionella sp.
- Plesiomonas shigelloides
- Vibrio spp.
- Vibrio cholerae
- Vibrio parahaemolyticus
- Vibrio vulnificus, V. alginolyticus, V. damsela
- Atypical Organisms
- Chlamydophila pneumoniae
- Chlamydophila psittaci
- Coxiella burnetii
- Legionella sp.
- Pneumonia, Mycoplasma
- Misc. Organisms
- Gardnerella vaginalis
- Eikenella corrodens
- Bordetella pertussis
- Bartonella sp.
- Stenotrophomonas: maltophilia
- Acinetobacter baumannii
- Anaerobic Gram-Negative Bacilli
- Bacteroides fragilis
- Bacteroides sp., Overview
- Fusobacterium necrophorum
- Fungal Infections
- Aspergillosis
- Allergic Bronchopulmonary (ABPA)
- Allergic Fungal Sinusitis
- Aspergilloma
- Chronic Cavitary Pulmonary
- Aspergillosis, Invasive
- Transplants, Aspergillus Prevention
- Blastomycosis
- Blastomycosis, Overview
- Cutaneous, Pulmonary or Extrapulmonary
- CNS, Meningitis
- See also,
- Lobomycosis
- Paracoccidioidomycosis
- Candidiasis
- Candidemia, Disseminated
- Chronic, Disseminated
- CNS, Meningitis
- Cutaneous
- Endocarditis
- Endophthalmitis, Candida
- Esophageal
- Neonatal
- Oropharyngeal
- Osteomyelitis
- Transplants, Prevention
- Urinary Tract Infection
- Vulvovaginitis
- Chromoblastomycosis
- Coccidioidomycosis
- Disseminated
- Meningitis
- Prophylaxis
- Pulmonary
- Cryptococcosis
- Pulmonary, Non-Meningeal
- Meningitis, Immunocompetent
- Meningitis, HIV/AIDS
- Dermatophytosis
- Onychomycosis
- Tinea capitis
- Tinea corporis, Tinea pedis, Tinea cruris
- Tinea versicolor
- Exserohilum rostratum
- Fusariosis
- Histoplasmosis
- CNS, Meningitis
- Mediastinal
- Pericarditis
- Progressive Disseminated
- Prophylaxis
- Pulmonary
- Mucormycosis
- Paracoccidioidomycosis
- Lobomycosis
- Penicilliosis
- Phaeohyphomycosis
- Scedosporiosis
- Sporotrichosis
- Pneumocystis jiroveci (carinii)(PCP)
- Pneumonia, Pneumocystis (PCP)
- Transplants, Prevention
- Mycobacterial Infections
- M. tuberculosis Infection
- Mycobacterium tuberculosis, Overview
- Treatment Algorithm
- Diagnostic testing (TST and Newer Tests)
- Exposure, Negative TST
- Latent Infection, High Risk
- Latent infection, Positive TST
- Pulmonary
- Susceptible Organism
- Mono-drug-resistant
- Multi-drug-resistant (MDR)
- Extensively-drug-resistant (XDR)
- Extrapulmonary
- Bone
- Arthritis
- Meningitis
- Pregnancy Considerations
- Treatment Failure, Relapse
- HIV/AIDS
- Atypical Mycobacterial Infections
- Atypical Mycobacteria
- M. abscessus
- M. bovis
- Bacillus Calmette-Guerin
- M. avium-intracellulare complex (MAC, MAI)
- Immunocompetent
- Immunocompromised
- M. celatum
- M. chelonae
- M. foruitum
- M. haemophilum
- M. genavense
- M. gordonae
- M. kansasii
- M. marinum
- M. scrofulaceum
- M. simiae
- M. ulcerans (Buruli Ulcer)
- M. xenopi
- M. leprae (Leprosy)
- Parasitic Infections
- Antiparasitic Drugs, Sources
- Eosinophilia
- Intestinal Protozoa
- Balantidium coli
- Blastocystis hominis
- Cryptosporidium parvum, hominis
- Cyclospora cayetanensis
- Dientamoeba fragilis
- Entamoeba histolytica (Amebiasis)
- Giardia lamblia, Giardiasis
- Cystoisospora belli (Isospora belli)
- Microsporidiosis
- Non-pathogenic intestinal protozoa
- Extraintestinal Protozoa
- Amebic meningoencephalitis
- Amebic meningoencephalitis
- Acanthaamoeba sp.
- Balamuthia mandrillaris
- Naegleria fowleri
- Sappinia diploidea
- Babesia microti (Babesiosis)
- Leishmaniasis
- Malaria
- Malaria, Overview
- Chloroquine-sensitive, Prophylaxis
- Chloroquine-resistant, Prophylaxis
- Self-initiated Treatment
- Severe
- Uncomplicated, Non-P. falciparum
- Uncomplicated, P. falciparum
- Toxoplasma gondii
- Immunocompetent
- HIV/AIDS
- Transplants, Prevention
- Trichomonas vaginalis
- Trypanosomiasis
- American
- East African
- West African
- Transplants, Prevention
- Intestinal Nematodes (Roundworms)
- Anisakis simplex, Anisakiasis
- Ascaris lumbricoides, Ascariasis
- Capillaria philippinensis, Capillariasis
- Enterobius vermicularis (Pinworm)
- Gongylonemiasis
- Hookworm, Necator americanus and Ancylostoma duodenale
- Strongyloides stercoralis, Strongyloidiasis
- Trichostrongylus orientalis
- Trichuris trichiura, Whipworm
- Extraintestinal Nematodes (Roundworms)
- Ancylostoma braziliense, caninum (Cutaneous Larva Migrans)
- Angiostrongylus cantonensis, Angiostrongyliasis
- Baylisascariasis, Raccoon ascaris
- Dracunculus medinensis, Guinea Worm
- Filariasis
- Filariasis, Overview
- Body Cavity (mansonellosis)
- Cutaneous (Loiasis, onchocerciasis)
- Dirofilariasis
- Lymphatic (W. bancrofti, B. malayi)
- Gnathostoma spinigerum, Eosinophilic Myeloencephalitis
- Toxocariasis
- Trichinella spiralis, Trichinosis
- Trematodes (Flukes)
- Clonorchis sinensis, liver fluke
- Dicrocoelium dendriticum
- Fasciola buski, intestinal fluke
- Fasciola hepatica, sheep liver fluke
- Heterophyes heterophyes (intestinal fluke); Metagonimus yokogawai (intestinal fluke)
- Paragonimus westermani, lung fluke
- Schistosomiasis
- Cestodes (Tapeworms)
- Echinococcus
- Intestinal tapeworms
- Neurocysticercosis
- Sparganosis, Spirometra mansonoides
- Ectoparasites
- Body Lice
- Head Lice
- Pubic Lice
- Scabies
- Myiasis
- Viral Infections
- Adenovirus
- Coronavirus (SARS)
- Cytomegalovirus
- Cytomegalovirus, Gastrointestinal Disease
- Cytomegalovirus in Transplant Recipients
- Cytomegalovirus Neurologic Disease
- Pneumonia, Cytomegalovirus
- Pregnancy
- Prevention
- Solid Organ
- Stem Cell
- Retinitis, Cytomegalovirus
- Enterovirus
- Erythema Multiforme
- Hemorrhagic Fever Viruses
- Crimean-Congo
- Ebola, Marburg
- Hantavirus Pulmonary Syndrome
- Renal Syndromes
- Dengue
- West Nile Virus
- Yellow Fever Virus
- Chikungunya Fever
- Hepatitis
- Hepatitis Overview
- HAV, Acute, Treatment
- Immunization (HAV, HBV)
- Hepatitis B (HBV)
- HBV Clinical Presentation
- HBV Epidemiology
- HBV, Exposure Management
- HBV Natural History
- HBV, Prophylaxis, Transplants
- HBV Treatment
- Transplants, Hepatitis B Prevention
- Hepatitis C (HCV)
- HCV Epidemiology
- HCV Diagnosis
- HCV Natural History
- HCV Clinical Presentation and Staging
- HCV Treatment Setting
- HCV Treatment
- HCV Drugs In Development
- HCV, Exposure Management
- Herpesviruses
- Cytomegalovirus
- Cytomegalovirus, Gastrointestinal Disease
- Cytomegalovirus in Transplant Recipients
- Cytomegalovirus Neurologic Disease
- Pneumonia, Cytomegalovirus
- Pregnancy
- CMV Prevention
- Solid Organ
- Stem Cell
- Retinitis, Cytomegalovirus
- Epstein-Barr Virus (Mono)
- HHV-6, HHV-7, HHV-8
- Herpes simplex virus (HSV Types 1, 2)
- Bell's Palsy
- Encephalitis
- Genital
- Gingivostomatitis
- Oral Labial
- Stomatitis
- Herpes simiae
- Varicella-Zoster virus (VZV), Chickenpox
- Herpes-Zoster, Shingles
- Transplants and Hematological Malignancy, HSV and VZV Prevention
- HIV, AIDS
- Antiretroviral Therapy, Overview
- Antiretrovrial Therapy, Treatment Naive Adult
- HIV/Hepatitis Exposure Management
- HIV Exposure, Hepatitis Exposure, Overview
- Occupational
- Non-occupational
- Human Metapneumovirus (HMPV)
- Human Papillomavirus (HPV)
- Influenza
- Influenza Virus, Overview
- Influenza A
- Seasonal A/H1N1
- Swine A/H1N1
- A/H3N2
- Influenza B
- Influenza, Avian H5N1
- Influenza, Prevention
- Measles
- Middle East Respiratory Syndrome, MERS
- Monkey Pox
- Monkey Pox
- See Also, Gastroenteritis, Empiric Therapy
- Nipah Virus
- Orf, Ecthyma contagiosum
- Paramyxovirus
- Parvo B19 Virus
- Papovavirus, Polyomavirus
- Progressive Multifocal Leukoencephalopathy (PML)
- BK Virus Induced Neuropathy
- Progressive multifocal leukoencephalopathy, JC virus
- Rabies
- Rabies, Post-Exposure Prophylaxis
- See Also, Bites
- Respiratory Syncytial Virus
- Rhinovirus
- Rotavirus
- SFTSV (Severe Fever Thrombocytopenia Syndrome Virus)
- Smallpox
- HIV/AIDS Therapy
- HIV/AIDS Overview
- HIV Risk Assessment
- Recommendations for HIV Testing
- Natural History of HIV
- HIV Clinical Staging, Classification
- HIV Infection in Children, Overview
- HIV in the Fetus and Newborn, Overview
- HIV in Women and Pregnancy, Overview
- Patient Evaluation & Prevention
- Pre-Exposure Prophylaxis (PrEP)
- Initial Evaluation of the HIV-Infected Adult
- Initial Evaluation of HIV-Infected Child
- HIV Exposure, Hepatitis Exposure, Overview
- HIV, Occupational Exposure
- HIV, Non-occupational Exposure
- Immunization, Routine, HIV+ Adults
- Immunization, Travel, HIV+ Adults
- Immunization, Routine, HIV+ Child
- HIV and Travel Considerations
- Diagnostic & Resistance Testing
- HIV Diagnosis & Testing, Overview
- Rapid HIV Antibody Screening Testing
- HIV Enzyme Immunoassay Antibody Tests
- HIV Combined Antigen Antibody Tests & Home Tests
- Detection & Quantitation of HIV-1 RNA, Viral Load
- CD4 & CD8 T-Lymphocyte Counts
- HTLV Diagnosis & Testing
- ARV Drug Resistance Testing, Overview
- Genotype Resistance Testing
- Phenotype Resistance Testing
- Diagnosis of HIV-2 Infection
- Diagnosis of Primary/Acute HIV Infection
- Genotype Resistance Mutations: NRTIs
- Genotype Resistance Mutations: NNRTI
- Genotype Resistance Mutations: PI
- Genotype Resistance Mutations: All Other
- Treatment: Antiretroviral Therapy, ART
- Antiretroviral Therapy (ART), Overview
- Antiretroviral Therapy (ART), Adult
- ARV Regimens Not Recommended, Adult
- ART Treatment Failure, Adult
- Starting ART in Children
- Recommended ART Regimens in Children
- Response to ART in Children
- ART in Pregnancy
- ARV Drugs: Adverse Effects By Clinical Presentation
- Primary (Acute, Early) HIV Infection
- HIV-2
- Antiretroviral Agents
- Antiretroviral Drugs, Overview
- Nucleoside, Nucleotide Agents (NRTIs)
- Abacavir
- Didanosine
- Emtricitabine
- Lamivudine
- Stavudine
- Tenofovir disoproxil fumarate
- Zidovudine
- Non-nucleoside Agents (NNRTIs)
- Delavirdine
- Efavirenz
- Etravirine
- Nevirapine
- Rilpivirine
- NRTI/NNRTI Combinations
- Atripla
- Combivir
- Complera, Eviplera
- Epzicom
- Trizivir
- Truvada
- Protease Inhibitors (PIs)
- Atazanavir
- Darunavir
- Fosamprenavir
- Indinavir
- Lopinavir-Ritonavir
- Nelfinavir
- Ritonavir
- Saquinavir
- Tipranavir
- Fusion Inhibitor
- Enfuvirtide
- CCR-5 Antagonist
- Maraviroc
- Strand Transfer Integrase Inhibitor (STII)
- Raltegravir
- Elvitegravir (Stribild)
- ARV Drug Cost Comparison
- Antiretroviral Drug-Drug Interactions
- Overlapping Toxicities: ARV Drugs & Other Drugs
- HIV ARV Drugs in Development
- HIV-related Syndromes
- Editorial Note to Readers
- Immune Reconstitution Inflammatory Syndrome, IRIS
- ART: Effect on Specific OIs
- Clinical Syndromes, OIs in HIV+ Children
- HIV/AIDS-associated Malignancies
- Stimulating Erythropoiesis and Granulocyte Production