TCF21 (gene)
Transcription factor 21 | |||||||||||
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Identifiers | |||||||||||
Symbols | TCF21 ; POD1 | ||||||||||
External IDs | Template:OMIM5 Template:MGI HomoloGene: 2414 | ||||||||||
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RNA expression pattern | |||||||||||
File:PBB GE TCF21 204931 at tn.png | |||||||||||
More reference expression data | |||||||||||
Orthologs | |||||||||||
Template:GNF Ortholog box | |||||||||||
Species | Human | Mouse | |||||||||
Entrez | n/a | n/a | |||||||||
Ensembl | n/a | n/a | |||||||||
UniProt | n/a | n/a | |||||||||
RefSeq (mRNA) | n/a | n/a | |||||||||
RefSeq (protein) | n/a | n/a | |||||||||
Location (UCSC) | n/a | n/a | |||||||||
PubMed search | n/a | n/a |
Transcription factor 21, also known as TCF21, is a human gene.[1]
TCF21 encodes a transcription factor of the basic helix-loop-helix family. The TCF21 product is mesoderm specific, and expressed in embryonic epicardium, mesenchyme-derived tissues of lung, gut, gonad, and both mesenchymal and glomerular epithelial cells in the kidney. Two transcript variants encoding the same protein have been found for this gene.[1]
References
Further reading
- Littlewood TD, Evan GI (1995). "Transcription factors 2: helix-loop-helix". Protein profile. 2 (6): 621–702. PMID 7553065.
- Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. PMID 8889548.
- Quaggin SE, Vanden Heuvel GB, Igarashi P (1998). "Pod-1, a mesoderm-specific basic-helix-loop-helix protein expressed in mesenchymal and glomerular epithelial cells in the developing kidney". Mech. Dev. 71 (1–2): 37–48. PMID 9507058.
- Hidai H, Bardales R, Goodwin R; et al. (1998). "Cloning of capsulin, a basic helix-loop-helix factor expressed in progenitor cells of the pericardium and the coronary arteries". Mech. Dev. 73 (1): 33–43. PMID 9545526.
- Robb L, Mifsud L, Hartley L; et al. (1999). "epicardin: A novel basic helix-loop-helix transcription factor gene expressed in epicardium, branchial arch myoblasts, and mesenchyme of developing lung, gut, kidney, and gonads". Dev. Dyn. 213 (1): 105–13. doi:10.1002/(SICI)1097-0177(199809)213:1<105::AID-AJA10>3.0.CO;2-1. PMID 9733105.
- Quaggin SE, Schwartz L, Cui S; et al. (2000). "The basic-helix-loop-helix protein pod1 is critically important for kidney and lung organogenesis". Development. 126 (24): 5771–83. PMID 10572052.
- Suzuki H, Fukunishi Y, Kagawa I; et al. (2001). "Protein-protein interaction panel using mouse full-length cDNAs". Genome Res. 11 (10): 1758–65. doi:10.1101/gr.180101. PMID 11591653.
- Strausberg RL, Feingold EA, Grouse LH; et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMID 12477932.
- Funato N, Ohyama K, Kuroda T, Nakamura M (2003). "Basic helix-loop-helix transcription factor epicardin/capsulin/Pod-1 suppresses differentiation by negative regulation of transcription". J. Biol. Chem. 278 (9): 7486–93. doi:10.1074/jbc.M212248200. PMID 12493738.
- Mungall AJ, Palmer SA, Sims SK; et al. (2003). "The DNA sequence and analysis of human chromosome 6". Nature. 425 (6960): 805–11. doi:10.1038/nature02055. PMID 14574404.
- Ota T, Suzuki Y, Nishikawa T; et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
- Colland F, Jacq X, Trouplin V; et al. (2004). "Functional proteomics mapping of a human signaling pathway". Genome Res. 14 (7): 1324–32. doi:10.1101/gr.2334104. PMID 15231748.
- Gerhard DS, Wagner L, Feingold EA; et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMID 15489334.
- Smith LT, Lin M, Brena RM; et al. (2006). "Epigenetic regulation of the tumor suppressor gene TCF21 on 6q23-q24 in lung and head and neck cancer". Proc. Natl. Acad. Sci. U.S.A. 103 (4): 982–7. doi:10.1073/pnas.0510171102. PMID 16415157.
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