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Gram-Positive Cocci: 

Enterococcus faecalis  ●  Enterococcus faecium  ●  Staphylococcus aureus  ●  Staphylococcus, coagulase-negative species  ●  Staphylococcus epidermidis  ●  Staphylococcus haemolyticus  ●  Staphylococcus lugdunensis  ●  Staphylococcus saprophyticus  ●  Streptobacillus moniliformis  ●  Streptococcus anginosus  ●  Streptococcus pneumoniae  ●  Streptococcus pyogenes  ●  Streptococcus agalactiae


Gram-Positive Bacilli:  Actinomyces israelii  ●  Arcanobacterium haemolyticum  ●  Bacillus anthracis  ●  Bacillus cereus  ●  Bacillus subtilis  ●  Clostridium difficile  ●  Clostridium perfringens  ●  Clostridium tetani  ●  Corynebacterium diphtheriae  ●  Corynebacterium jeikeium  ●  Corynebacterium urealyticum  ●  Coxiella burnetii  ●  Ehrlichia  ●  Erysipelothrix rhusiopathiae  ●  Listeria monocytogenes  ●  Lactobacillus  ●  Leuconostoc  ●  Nocardia  ●  Propionibacterium acnes  ●  Rhodococcus equi  ●  Rickettsia rickettsii  ●  Rickettsia prowazekii  ●  Rickettsia typhi


Gram-Negative Cocci and Coccobacilli:  Aggregatibacter aphrophilus  ●  Bordetella pertussis  ●  Brucella  ●  Eikenella corrodens  ●  Haemophilus ducreyi  ●  Haemophilus influenzae  ●  Neisseria gonorrhoeae  ●  Neisseria meningitidis  ●  Moraxella catarrhalis  ●  Pasteurella multocida


Gram-Negative Bacilli:  Achromobacter xylosoxidans  ●  Acinetobacter baumannii  ●  Aeromonas hydrophila  ●  Bartonella bacilliformis  ●  Bartonella henselae  ●  Bartonella quintana  ●  Burkholderia cepacia  ●  Burkholderia pseudomallei  ●  Campylobacter fetus  ●  Campylobacter jejuni  ●  Capnocytophaga  ●  Citrobacter freundii  ●  Citrobacter koseri  ●  Elizabethkingia meningoseptica  ●  Enterobacter aerogenes  ●  Enterobacter cloacae  ●  Escherichia coli  ●  Francisella tularensis  ●  Helicobacter pylori  ●  Klebsiella pneumoniae  ●  Klebsiella rhinoscleromatis  ●  Legionella pneumophila  ●  Morganella morganii  ●  Plesiomonas shigelloides  ●  Proteus vulgaris  ●  Providencia  ●  Pseudomonas aeruginosa  ●  Salmonella  ●  Serratia marcescens  ●  Shigella  ●  Stenotrophomonas maltophilia  ●  Vibrio cholerae  ●  Vibrio parahaemolyticus  ●  Vibrio vulnificus


Anaerobic Gram-Negative Bacilli:  Bacteroides fragilis  ●  Fusobacterium necrophorum


Mycobacteria:  Mycobacterium tuberculosis  ●  Mycobacterium abscessus  ●  Mycobacterium bovis  ●  Mycobacterium avium-intracellulare  ●  Mycobacterium celatum  ●  Mycobacterium chelonae  ●  Mycobacterium foruitum  ●  Mycobacterium haemophilum  ●  Mycobacterium genavense  ●  Mycobacterium gordonae  ●  Mycobacterium kansasii  ●  Mycobacterium marinum  ●  Mycobacterium scrofulaceum  ●  Mycobacterium simiae  ●  Mycobacterium ulcerans  ●  Mycobacterium xenopi  ●  Mycobacterium leprae


Spirochetes:  Borrelia burgdorferi  ●  Borrelia recurrentis  ●  Leptospira  ●  Treponema pallidum


Miscellaneous:  Gardnerella vaginalis  ●  Stenotrophomonas maltophilia  ●  Acinetobacter baumannii  ●  Chlamydia pneumoniae  ●  Chlamydia psittaci  ●  Mycoplasma pneumoniae


Fungi:  Aspergillosis  ●  Blastomycosis  ●  Candidiasis  ●  Chromoblastomycosis  ●  Coccidioidomycosis  ●  Cryptococcosis  ●  Dermatophytosis  ●  Onychomycosis  ●  Paracoccidioidomycosis  ●  Tinea capitis  ●  Tinea corporis  ●  Tinea cruris  ●  Tinea pedis  ●  Tinea versicolor


Intestinal Protozoa:  Balantidium coli  ●  Blastocystis hominis  ●  Cryptosporidium parvum  ●  Cryptosporidium hominis  ●  Cyclospora cayetanensis  ●  Dientamoeba fragilis  ●  Entamoeba histolytica  ●  Giardia lamblia  ●  Isospora belli  ●  Microsporidiosis


Extratestinal Protozoa:  Acanthamoeba  ●  African trypanosomiasis  ●  American trypanosomiasis  ●  Babesia microti  ●  Balamuthia mandrillaris  ●  Leishmaniasis  ●  Naegleria fowleri  ●  Plasmodium  ●  Toxoplasma gondii  ●  Trichomonas vaginalis


Intestinal Nematodes (Roundworms):  Ascaris lumbricoides  ●  Capillaria philippinensis  ●  Enterobius vermicularis  ●  Necator americanus  ●  Ancylostoma duodenale  ●  Strongyloides stercoralis  ●  Trichuris trichiura


Extraintestinal Nematodes (Roundworms):  Ancylostoma braziliense  ●  Ancylostoma duodenale  ●  Angiostrongylus cantonensis  ●  Filariasis  ●  Onchocerciasis  ●  Strongyloides stercoralis  ●  Trichuris trichiura  ●  Wuchereria bancrofti


Parasites – Trematodes (Flukes):  Clonorchis sinensis  ●  Dicrocoelium dendriticum  ●  Fasciola hepatica  ●  Paragonimus westermani  ●  Schistosomiasis  ● 


Parasites – Cestodes (Tapeworms):  Echinococcus  ●  Neurocysticercosis  ●  Sparganosis


Parasites – Ectoparasites:  Body lice  ●  Head lice  ●  Myiasis  ●  Pubic lice  ●  Scabies


Viruses:  Adenovirus  ●  Avian influenza  ●  BK virus  ●  Chikungunya virus  ●  Cytomegalovirus  ●  Dengue virus  ●  Ebola virus  ●  Enterovirus D68  ●  Epstein-Barr virus  ●  Hantavirus  ●  Hepatitis A virus  ●  Hepatitis B virus  ●  Hepatitis C virus  ●  Hepatitis D virus  ●  Hepatitis E virus  ●  Herpes simplex virus  ●  HIV/AIDS  ●  Human herpesvirus 6  ●  Human herpesvirus 7  ●  Human herpesvirus 8 (KSHV)  ●  Human papillomavirus  ●  Influenza A  ●  Influenza B  ●  JC virus  ●  Marburg virus  ●  Measles  ●  Middle East respiratory syndrome  ●  Paramyxovirus  ●  Parvovirus B19  ●  Rabies  ●  Respiratory Syncytial Virus  ●  Rhinovirus  ●  Rotavirus  ●  SARS  ●  Smallpox  ●  Swine influenza  ●  Varicella-zoster virus  ●  West Nile virus  ● 

Yellow Fever


==A==
  • Acanthamoeba
  • Achromobacter xylosoxidans
  • Acinetobacter baumannii
  • Actinomyces israelii
  • Adenovirus
  • Aeromonas hydrophila
  • African trypanosomiasis
  • Aggregatibacter aphrophilus
  • American trypanosomiasis
  • Ancylostoma braziliense
  • Ancylostoma duodenale
  • Angiostrongylus cantonensis
  • Arcanobacterium haemolyticum
  • Ascaris lumbricoides
  • Aspergillosis
  • Avian influenza
  • B

  • Babesia microti
  • Bacillus anthracis
  • Bacillus cereus
  • Bacillus subtilis
  • Bacteroides fragilis
  • Balamuthia mandrillaris
  • Balantidium coli
  • Bartonella bacilliformis
  • Blastocystis hominis
  • Bartonella henselae
  • Bartonella quintana
  • BK virus
  • Blastomycosis
  • Body lice
  • Bordetella pertussis
  • Borrelia burgdorferi
  • Borrelia recurrentis
  • Brucella
  • Brugia malayi
  • Burkholderia cepacia
  • Burkholderia pseudomallei
  • C

  • Campylobacter fetus
  • Campylobacter jejuni
  • Candidiasis
  • Capillaria philippinensis
  • Capnocytophaga
  • Chikungunya virus
  • Chlamydia pneumoniae
  • Chlamydia psittaci
  • Chromoblastomycosis
  • Citrobacter freundii
  • Citrobacter koseri
  • Clonorchis sinensis
  • Clostridium difficile
  • Clostridium perfringens
  • Clostridium tetani
  • Coccidioidomycosis
  • Corynebacterium diphtheriae
  • Corynebacterium jeikeium
  • Corynebacterium urealyticum
  • Coxiella burnetii
  • Cryptococcosis
  • Cryptosporidium parvum
  • Cryptosporidium hominis
  • Cyclospora cayetanensis
  • Cytomegalovirus
  • D

  • Dengue virus
  • Dermatophytosis
  • Dicrocoelium dendriticum
  • Dientamoeba fragilis
  • E

  • Ebola virus
  • Echinococcus
  • Ehrlichia
  • Eikenella corrodens
  • Elizabethkingia meningoseptica
  • Entamoeba histolytica
  • Enterobacter aerogenes
  • Enterobacter cloacae
  • Enterobius vermicularis
  • Enterococcus faecalis
  • Enterococcus faecium
  • Enterovirus D68
  • Epstein-Barr virus
  • Erysipelothrix rhusiopathiae
  • Escherichia coli
  • F

  • Fasciola hepatica
  • Filariasis
  • Francisella tularensis
  • Fusobacterium necrophorum
  • G

  • Gardnerella vaginalis
  • Giardia lamblia
  • Gnathostoma spinigerum
  • H

  • Haemophilus ducreyi
  • Haemophilus influenzae
  • Hantavirus
  • Head lice
  • Helicobacter pylori
  • Hepatitis A virus
  • Hepatitis B virus
  • Hepatitis C virus
  • Hepatitis D virus
  • Hepatitis E virus
  • Herpes simplex virus
  • Histoplasmosis
  • HIV/AIDS
  • Human herpesvirus 6
  • Human herpesvirus 7
  • Human herpesvirus 8 (KSHV)
  • Human papillomavirus
  • I

  • Influenza A
  • Influenza B
  • Isospora belli
  • J

  • JC virus
  • K

  • Klebsiella pneumoniae
  • Klebsiella rhinoscleromatis
  • L

  • Lactobacillus
  • Legionella pneumophila
  • Leishmaniasis
  • Leptospira
  • Leuconostoc
  • Listeria monocytogenes
  • M

  • Marburg virus
  • Measles
  • Microsporidiosis
  • Middle East respiratory syndrome
  • Moraxella catarrhalis
  • Morganella morganii
  • Mucormycosis
  • Mycobacterium abscessus
  • Mycobacterium avium-intracellulare
  • Mycobacterium bovis
  • Mycobacterium celatum
  • Mycobacterium chelonae
  • Mycobacterium foruitum
  • Mycobacterium genavense
  • Mycobacterium gordonae
  • Mycobacterium haemophilum
  • Mycobacterium kansasii
  • Mycobacterium leprae
  • Mycobacterium marinum
  • Mycobacterium scrofulaceum
  • Mycobacterium simiae
  • Mycobacterium tuberculosis
  • Mycobacterium ulcerans
  • Mycobacterium xenopi
  • Mycoplasma pneumoniae
  • Myiasis
  • N

  • Naegleria fowleri
  • Necator americanus
  • Neisseria gonorrhoeae
  • Neisseria meningitidis
  • Neurocysticercosis
  • Nocardia
  • O

  • Onchocerciasis
  • Onychomycosis
  • P

  • Paracoccidioidomycosis
  • Paragonimus westermani
  • Paramyxovirus
  • Parvovirus B19
  • Pasteurella multocida
  • Penicilliosis
  • Plasmodium
  • Plesiomonas shigelloides
  • Pneumocystis jiroveci
  • Propionibacterium acnes
  • Proteus vulgaris
  • Providencia
  • Pseudomonas aeruginosa
  • Pubic lice
  • R

  • Rabies
  • Respiratory Syncytial Virus
  • Rhinovirus
  • Rhodococcus equi
  • Rickettsia prowazekii
  • Rickettsia rickettsii
  • Rickettsia typhi
  • Rotavirus
  • S

  • Salmonella
  • SARS
  • Scabies
  • Schistosomiasis
  • Serratia marcescens
  • Shigella
  • Smallpox
  • Sparganosis
  • Sporotrichosis
  • Staphylococcus aureus
  • Staphylococcus epidermidis
  • Staphylococcus haemolyticus
  • Staphylococcus lugdunensis
  • Staphylococcus saprophyticus
  • Staphylococcus, coagulase-negative species
  • Stenotrophomonas maltophilia
  • Streptobacillus moniliformis
  • Streptococcus agalactiae
  • Streptococcus anginosus
  • Streptococcus pneumoniae
  • Streptococcus pyogenes
  • Strongyloides stercoralis
  • Swine influenza
  • T

  • Tinea capitis
  • Tinea corporis
  • Tinea cruris
  • Tinea pedis
  • Tinea versicolor
  • Toxocariasis
  • Toxoplasma gondii
  • Treponema pallidum
  • Trichinella spiralis
  • Trichomonas vaginalis
  • Trichuris trichiura
  • V

  • Varicella-zoster virus
  • Vibrio cholerae
  • Vibrio parahaemolyticus
  • Vibrio vulnificus
  • W

  • West Nile virus
  • Wuchereria bancrofti
  • Y

  • Yellow Fever