Small nuclear ribonucleoprotein polypeptide E: Difference between revisions
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{{ | '''Small nuclear ribonucleoprotein E''' is a [[protein]] that in humans is encoded by the ''SNRPE'' [[gene]].<ref name="pmid1835977">{{cite journal | vauthors = Fautsch MP, Wieben ED | title = Transcriptional regulation of the small nuclear ribonucleoprotein E protein gene. Identification of cis-acting sequences with homology to genes encoding ribosomal proteins | journal = The Journal of Biological Chemistry | volume = 266 | issue = 34 | pages = 23288–95 | date = December 1991 | pmid = 1835977 | pmc = | doi = }}</ref><ref name="pmid2143747">{{cite journal | vauthors = Neiswanger K, Stanford DR, Sparkes RS, Nishimura D, Mohandas T, Klisak I, Heinzmann C, Wieben ED | title = Assignment of the gene for the small nuclear ribonucleoprotein E (SNRPE) to human chromosome 1q25-q43 | journal = Genomics | volume = 7 | issue = 4 | pages = 503–8 | date = August 1990 | pmid = 2143747 | pmc = | doi = 10.1016/0888-7543(90)90192-W }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: SNRPE small nuclear ribonucleoprotein polypeptide E| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=6635| accessdate = }}</ref> | ||
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== Interactions == | |||
< | Small nuclear ribonucleoprotein polypeptide E has been shown to [[Protein-protein interaction|interact]] with [[DDX20]]<ref name=pmid10601333>{{cite journal | vauthors = Charroux B, Pellizzoni L, Perkinson RA, Shevchenko A, Mann M, Dreyfuss G | title = Gemin3: A novel DEAD box protein that interacts with SMN, the spinal muscular atrophy gene product, and is a component of gems | journal = The Journal of Cell Biology | volume = 147 | issue = 6 | pages = 1181–94 | date = December 1999 | pmid = 10601333 | pmc = 2168095 | doi = 10.1083/jcb.147.6.1181 }}</ref> and [[Small nuclear ribonucleoprotein polypeptide F]].<ref name=pmid9417867>{{cite journal | vauthors = Fury MG, Zhang W, Christodoulopoulos I, Zieve GW | title = Multiple protein: protein interactions between the snRNP common core proteins | journal = Experimental Cell Research | volume = 237 | issue = 1 | pages = 63–9 | date = November 1997 | pmid = 9417867 | doi = 10.1006/excr.1997.3750 }}</ref> | ||
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==References== | == References == | ||
{{reflist | {{reflist}} | ||
==Further reading== | |||
== Further reading == | |||
{{refbegin | 2}} | {{refbegin | 2}} | ||
* {{cite journal | vauthors = Sauterer RA, Goyal A, Zieve GW | title = Cytoplasmic assembly of small nuclear ribonucleoprotein particles from 6 S and 20 S RNA-free intermediates in L929 mouse fibroblasts | journal = The Journal of Biological Chemistry | volume = 265 | issue = 2 | pages = 1048–58 | date = January 1990 | pmid = 1688550 | doi = }} | |||
* {{cite journal | vauthors = Stanford DR, Rohleder A, Neiswanger K, Wieben ED | title = DNA sequence of a human Sm autoimmune antigen. The multigene family contains a processed pseudogene | journal = The Journal of Biological Chemistry | volume = 262 | issue = 21 | pages = 9931–4 | date = July 1987 | pmid = 2440864 | doi = }} | |||
*{{cite journal | * {{cite journal | vauthors = Feeney RJ, Sauterer RA, Feeney JL, Zieve GW | title = Cytoplasmic assembly and nuclear accumulation of mature small nuclear ribonucleoprotein particles | journal = The Journal of Biological Chemistry | volume = 264 | issue = 10 | pages = 5776–83 | date = April 1989 | pmid = 2522439 | doi = }} | ||
*{{cite journal | * {{cite journal | vauthors = Stanford DR, Perry CA, Holicky EL, Rohleder AM, Wieben ED | title = The small nuclear ribonucleoprotein E protein gene contains four introns and has upstream similarities to genes for ribosomal proteins | journal = The Journal of Biological Chemistry | volume = 263 | issue = 33 | pages = 17772–9 | date = November 1988 | pmid = 2972723 | doi = }} | ||
*{{cite journal | * {{cite journal | vauthors = Stanford DR, Kehl M, Perry CA, Holicky EL, Harvey SE, Rohleder AM, Rehder K, Luhrmann R, Wieben ED | title = The complete primary structure of the human snRNP E protein | journal = Nucleic Acids Research | volume = 16 | issue = 22 | pages = 10593–605 | date = November 1988 | pmid = 2974536 | pmc = 338926 | doi = 10.1093/nar/16.22.10593 }} | ||
*{{cite journal | * {{cite journal | vauthors = Woppmann A, Rinke J, Lührmann R | title = Direct cross-linking of snRNP proteins F and 70K to snRNAs by ultra-violet radiation in situ | journal = Nucleic Acids Research | volume = 16 | issue = 23 | pages = 10985–1004 | date = December 1988 | pmid = 2974540 | pmc = 338992 | doi = 10.1093/nar/16.23.10985 }} | ||
*{{cite journal | * {{cite journal | vauthors = Kamiyama T, Aoki N, Yuasa Y | title = B-raf oncogene: activation by rearrangements and assignment to human chromosome 7 | journal = Japanese Journal of Cancer Research | volume = 84 | issue = 3 | pages = 250–6 | date = March 1993 | pmid = 8098025 | doi = 10.1111/j.1349-7006.1993.tb02864.x }} | ||
*{{cite journal | * {{cite journal | vauthors = Plessel G, Lührmann R, Kastner B | title = Electron microscopy of assembly intermediates of the snRNP core: morphological similarities between the RNA-free (E.F.G) protein heteromer and the intact snRNP core | journal = Journal of Molecular Biology | volume = 265 | issue = 2 | pages = 87–94 | date = January 1997 | pmid = 9020971 | doi = 10.1006/jmbi.1996.0713 }} | ||
*{{cite journal | * {{cite journal | vauthors = Liu Q, Fischer U, Wang F, Dreyfuss G | title = The spinal muscular atrophy disease gene product, SMN, and its associated protein SIP1 are in a complex with spliceosomal snRNP proteins | journal = Cell | volume = 90 | issue = 6 | pages = 1013–21 | date = September 1997 | pmid = 9323129 | doi = 10.1016/S0092-8674(00)80367-0 }} | ||
*{{cite journal | * {{cite journal | vauthors = Fury MG, Zhang W, Christodoulopoulos I, Zieve GW | title = Multiple protein: protein interactions between the snRNP common core proteins | journal = Experimental Cell Research | volume = 237 | issue = 1 | pages = 63–9 | date = November 1997 | pmid = 9417867 | doi = 10.1006/excr.1997.3750 }} | ||
*{{cite journal | * {{cite journal | vauthors = Kambach C, Walke S, Young R, Avis JM, de la Fortelle E, Raker VA, Lührmann R, Li J, Nagai K | title = Crystal structures of two Sm protein complexes and their implications for the assembly of the spliceosomal snRNPs | journal = Cell | volume = 96 | issue = 3 | pages = 375–87 | date = February 1999 | pmid = 10025403 | doi = 10.1016/S0092-8674(00)80550-4 }} | ||
*{{cite journal | * {{cite journal | vauthors = Charroux B, Pellizzoni L, Perkinson RA, Shevchenko A, Mann M, Dreyfuss G | title = Gemin3: A novel DEAD box protein that interacts with SMN, the spinal muscular atrophy gene product, and is a component of gems | journal = The Journal of Cell Biology | volume = 147 | issue = 6 | pages = 1181–94 | date = December 1999 | pmid = 10601333 | pmc = 2168095 | doi = 10.1083/jcb.147.6.1181 }} | ||
*{{cite journal | * {{cite journal | vauthors = Charroux B, Pellizzoni L, Perkinson RA, Yong J, Shevchenko A, Mann M, Dreyfuss G | title = Gemin4. A novel component of the SMN complex that is found in both gems and nucleoli | journal = The Journal of Cell Biology | volume = 148 | issue = 6 | pages = 1177–86 | date = March 2000 | pmid = 10725331 | pmc = 2174312 | doi = 10.1083/jcb.148.6.1177 }} | ||
*{{cite journal | * {{cite journal | vauthors = Urlaub H, Raker VA, Kostka S, Lührmann R | title = Sm protein-Sm site RNA interactions within the inner ring of the spliceosomal snRNP core structure | journal = The EMBO Journal | volume = 20 | issue = 1-2 | pages = 187–96 | date = January 2001 | pmid = 11226169 | pmc = 140196 | doi = 10.1093/emboj/20.1.187 }} | ||
*{{cite journal | * {{cite journal | vauthors = Gubitz AK, Mourelatos Z, Abel L, Rappsilber J, Mann M, Dreyfuss G | title = Gemin5, a novel WD repeat protein component of the SMN complex that binds Sm proteins | journal = The Journal of Biological Chemistry | volume = 277 | issue = 7 | pages = 5631–6 | date = February 2002 | pmid = 11714716 | doi = 10.1074/jbc.M109448200 }} | ||
* {{cite journal | vauthors = Pellizzoni L, Baccon J, Rappsilber J, Mann M, Dreyfuss G | title = Purification of native survival of motor neurons complexes and identification of Gemin6 as a novel component | journal = The Journal of Biological Chemistry | volume = 277 | issue = 9 | pages = 7540–5 | date = March 2002 | pmid = 11748230 | doi = 10.1074/jbc.M110141200 }} | |||
*{{cite journal | * {{cite journal | vauthors = Friesen WJ, Wyce A, Paushkin S, Abel L, Rappsilber J, Mann M, Dreyfuss G | title = A novel WD repeat protein component of the methylosome binds Sm proteins | journal = The Journal of Biological Chemistry | volume = 277 | issue = 10 | pages = 8243–7 | date = March 2002 | pmid = 11756452 | doi = 10.1074/jbc.M109984200 }} | ||
*{{cite journal | * {{cite journal | vauthors = Jurica MS, Licklider LJ, Gygi SR, Grigorieff N, Moore MJ | title = Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis | journal = RNA | volume = 8 | issue = 4 | pages = 426–39 | date = April 2002 | pmid = 11991638 | pmc = 1370266 | doi = 10.1017/S1355838202021088 }} | ||
*{{cite journal | |||
*{{cite journal | |||
}} | |||
{{refend}} | {{refend}} | ||
{{ | {{Ribonucleoproteins}} | ||
{{ | |||
{{gene-1-stub}} |
Latest revision as of 01:20, 28 November 2018
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External IDs | GeneCards: [1] | ||||||
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Species | Human | Mouse | |||||
Entrez |
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Ensembl |
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UniProt |
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RefSeq (mRNA) |
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Location (UCSC) | n/a | n/a | |||||
PubMed search | n/a | n/a | |||||
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Small nuclear ribonucleoprotein E is a protein that in humans is encoded by the SNRPE gene.[1][2][3]
Interactions
Small nuclear ribonucleoprotein polypeptide E has been shown to interact with DDX20[4] and Small nuclear ribonucleoprotein polypeptide F.[5]
References
- ↑ Fautsch MP, Wieben ED (December 1991). "Transcriptional regulation of the small nuclear ribonucleoprotein E protein gene. Identification of cis-acting sequences with homology to genes encoding ribosomal proteins". The Journal of Biological Chemistry. 266 (34): 23288–95. PMID 1835977.
- ↑ Neiswanger K, Stanford DR, Sparkes RS, Nishimura D, Mohandas T, Klisak I, Heinzmann C, Wieben ED (August 1990). "Assignment of the gene for the small nuclear ribonucleoprotein E (SNRPE) to human chromosome 1q25-q43". Genomics. 7 (4): 503–8. doi:10.1016/0888-7543(90)90192-W. PMID 2143747.
- ↑ "Entrez Gene: SNRPE small nuclear ribonucleoprotein polypeptide E".
- ↑ Charroux B, Pellizzoni L, Perkinson RA, Shevchenko A, Mann M, Dreyfuss G (December 1999). "Gemin3: A novel DEAD box protein that interacts with SMN, the spinal muscular atrophy gene product, and is a component of gems". The Journal of Cell Biology. 147 (6): 1181–94. doi:10.1083/jcb.147.6.1181. PMC 2168095. PMID 10601333.
- ↑ Fury MG, Zhang W, Christodoulopoulos I, Zieve GW (November 1997). "Multiple protein: protein interactions between the snRNP common core proteins". Experimental Cell Research. 237 (1): 63–9. doi:10.1006/excr.1997.3750. PMID 9417867.
Further reading
- Sauterer RA, Goyal A, Zieve GW (January 1990). "Cytoplasmic assembly of small nuclear ribonucleoprotein particles from 6 S and 20 S RNA-free intermediates in L929 mouse fibroblasts". The Journal of Biological Chemistry. 265 (2): 1048–58. PMID 1688550.
- Stanford DR, Rohleder A, Neiswanger K, Wieben ED (July 1987). "DNA sequence of a human Sm autoimmune antigen. The multigene family contains a processed pseudogene". The Journal of Biological Chemistry. 262 (21): 9931–4. PMID 2440864.
- Feeney RJ, Sauterer RA, Feeney JL, Zieve GW (April 1989). "Cytoplasmic assembly and nuclear accumulation of mature small nuclear ribonucleoprotein particles". The Journal of Biological Chemistry. 264 (10): 5776–83. PMID 2522439.
- Stanford DR, Perry CA, Holicky EL, Rohleder AM, Wieben ED (November 1988). "The small nuclear ribonucleoprotein E protein gene contains four introns and has upstream similarities to genes for ribosomal proteins". The Journal of Biological Chemistry. 263 (33): 17772–9. PMID 2972723.
- Stanford DR, Kehl M, Perry CA, Holicky EL, Harvey SE, Rohleder AM, Rehder K, Luhrmann R, Wieben ED (November 1988). "The complete primary structure of the human snRNP E protein". Nucleic Acids Research. 16 (22): 10593–605. doi:10.1093/nar/16.22.10593. PMC 338926. PMID 2974536.
- Woppmann A, Rinke J, Lührmann R (December 1988). "Direct cross-linking of snRNP proteins F and 70K to snRNAs by ultra-violet radiation in situ". Nucleic Acids Research. 16 (23): 10985–1004. doi:10.1093/nar/16.23.10985. PMC 338992. PMID 2974540.
- Kamiyama T, Aoki N, Yuasa Y (March 1993). "B-raf oncogene: activation by rearrangements and assignment to human chromosome 7". Japanese Journal of Cancer Research. 84 (3): 250–6. doi:10.1111/j.1349-7006.1993.tb02864.x. PMID 8098025.
- Plessel G, Lührmann R, Kastner B (January 1997). "Electron microscopy of assembly intermediates of the snRNP core: morphological similarities between the RNA-free (E.F.G) protein heteromer and the intact snRNP core". Journal of Molecular Biology. 265 (2): 87–94. doi:10.1006/jmbi.1996.0713. PMID 9020971.
- Liu Q, Fischer U, Wang F, Dreyfuss G (September 1997). "The spinal muscular atrophy disease gene product, SMN, and its associated protein SIP1 are in a complex with spliceosomal snRNP proteins". Cell. 90 (6): 1013–21. doi:10.1016/S0092-8674(00)80367-0. PMID 9323129.
- Fury MG, Zhang W, Christodoulopoulos I, Zieve GW (November 1997). "Multiple protein: protein interactions between the snRNP common core proteins". Experimental Cell Research. 237 (1): 63–9. doi:10.1006/excr.1997.3750. PMID 9417867.
- Kambach C, Walke S, Young R, Avis JM, de la Fortelle E, Raker VA, Lührmann R, Li J, Nagai K (February 1999). "Crystal structures of two Sm protein complexes and their implications for the assembly of the spliceosomal snRNPs". Cell. 96 (3): 375–87. doi:10.1016/S0092-8674(00)80550-4. PMID 10025403.
- Charroux B, Pellizzoni L, Perkinson RA, Shevchenko A, Mann M, Dreyfuss G (December 1999). "Gemin3: A novel DEAD box protein that interacts with SMN, the spinal muscular atrophy gene product, and is a component of gems". The Journal of Cell Biology. 147 (6): 1181–94. doi:10.1083/jcb.147.6.1181. PMC 2168095. PMID 10601333.
- Charroux B, Pellizzoni L, Perkinson RA, Yong J, Shevchenko A, Mann M, Dreyfuss G (March 2000). "Gemin4. A novel component of the SMN complex that is found in both gems and nucleoli". The Journal of Cell Biology. 148 (6): 1177–86. doi:10.1083/jcb.148.6.1177. PMC 2174312. PMID 10725331.
- Urlaub H, Raker VA, Kostka S, Lührmann R (January 2001). "Sm protein-Sm site RNA interactions within the inner ring of the spliceosomal snRNP core structure". The EMBO Journal. 20 (1–2): 187–96. doi:10.1093/emboj/20.1.187. PMC 140196. PMID 11226169.
- Gubitz AK, Mourelatos Z, Abel L, Rappsilber J, Mann M, Dreyfuss G (February 2002). "Gemin5, a novel WD repeat protein component of the SMN complex that binds Sm proteins". The Journal of Biological Chemistry. 277 (7): 5631–6. doi:10.1074/jbc.M109448200. PMID 11714716.
- Pellizzoni L, Baccon J, Rappsilber J, Mann M, Dreyfuss G (March 2002). "Purification of native survival of motor neurons complexes and identification of Gemin6 as a novel component". The Journal of Biological Chemistry. 277 (9): 7540–5. doi:10.1074/jbc.M110141200. PMID 11748230.
- Friesen WJ, Wyce A, Paushkin S, Abel L, Rappsilber J, Mann M, Dreyfuss G (March 2002). "A novel WD repeat protein component of the methylosome binds Sm proteins". The Journal of Biological Chemistry. 277 (10): 8243–7. doi:10.1074/jbc.M109984200. PMID 11756452.
- Jurica MS, Licklider LJ, Gygi SR, Grigorieff N, Moore MJ (April 2002). "Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis". RNA. 8 (4): 426–39. doi:10.1017/S1355838202021088. PMC 1370266. PMID 11991638.
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