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{{ | '''Synaptotagmin binding, cytoplasmic RNA interacting protein''', also known as '''Heterogeneous nuclear ribonucleoprotein Q''' is a [[protein]] that in humans is encoded by the ''SYNCRIP'' [[gene]].<ref name="pmid9847309">{{cite journal | vauthors = Harris CE, Boden RA, Astell CR | title = A novel heterogeneous nuclear ribonucleoprotein-like protein interacts with NS1 of the minute virus of mice | journal = Journal of Virology | volume = 73 | issue = 1 | pages = 72–80 | date = January 1999 | pmid = 9847309 | pmc = 103810 | doi = }}</ref><ref name="pmid11352648">{{cite journal | vauthors = Lau PP, Chang BH, Chan L | title = Two-hybrid cloning identifies an RNA-binding protein, GRY-RBP, as a component of apobec-1 editosome | journal = Biochemical and Biophysical Research Communications | volume = 282 | issue = 4 | pages = 977–83 | date = April 2001 | pmid = 11352648 | pmc = | doi = 10.1006/bbrc.2001.4679 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=10492| accessdate = }}</ref> | ||
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== Interactions == | |||
< | SYNCRIP has been shown to [[Protein-protein interaction|interact]] with [[ACF (gene)|ACF]],<ref name=pmid11352648 /><ref name=pmid11134005>{{cite journal | vauthors = Blanc V, Navaratnam N, Henderson JO, Anant S, Kennedy S, Jarmuz A, Scott J, Davidson NO | title = Identification of GRY-RBP as an apolipoprotein B RNA-binding protein that interacts with both apobec-1 and apobec-1 complementation factor to modulate C to U editing | journal = The Journal of Biological Chemistry | volume = 276 | issue = 13 | pages = 10272–83 | date = March 2001 | pmid = 11134005 | doi = 10.1074/jbc.M006435200 }}</ref> [[APOBEC1]],<ref name=pmid11352648/> [[SYT7]]<ref name=pmid10734137>{{cite journal | vauthors = Mizutani A, Fukuda M, Ibata K, Shiraishi Y, Mikoshiba K | title = SYNCRIP, a cytoplasmic counterpart of heterogeneous nuclear ribonucleoprotein R, interacts with ubiquitous synaptotagmin isoforms | journal = The Journal of Biological Chemistry | volume = 275 | issue = 13 | pages = 9823–31 | date = March 2000 | pmid = 10734137 | doi = 10.1074/jbc.275.13.9823 }}</ref> and [[SYT9]],<ref name=pmid10734137/> | ||
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==References== | == References == | ||
{{ | {{Reflist}} | ||
{{protein- | == Further reading == | ||
{{ | {{Refbegin | 2}} | ||
* {{cite journal | vauthors = Maruyama K, Sugano S | title = Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides | journal = Gene | volume = 138 | issue = 1-2 | pages = 171–4 | date = January 1994 | pmid = 8125298 | doi = 10.1016/0378-1119(94)90802-8 }} | |||
* {{cite journal | vauthors = Fu C, Chan AC | title = Identification of two tyrosine phosphoproteins, pp70 and pp68, which interact with phospholipase Cgamma, Grb2, and Vav after B cell antigen receptor activation | journal = The Journal of Biological Chemistry | volume = 272 | issue = 43 | pages = 27362–8 | date = October 1997 | pmid = 9341187 | doi = 10.1074/jbc.272.43.27362 }} | |||
* {{cite journal | vauthors = Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S | title = Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library | journal = Gene | volume = 200 | issue = 1-2 | pages = 149–56 | date = October 1997 | pmid = 9373149 | doi = 10.1016/S0378-1119(97)00411-3 }} | |||
* {{cite journal | vauthors = Neubauer G, King A, Rappsilber J, Calvio C, Watson M, Ajuh P, Sleeman J, Lamond A, Mann M | title = Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex | journal = Nature Genetics | volume = 20 | issue = 1 | pages = 46–50 | date = September 1998 | pmid = 9731529 | doi = 10.1038/1700 }} | |||
* {{cite journal | vauthors = Mizutani A, Fukuda M, Ibata K, Shiraishi Y, Mikoshiba K | title = SYNCRIP, a cytoplasmic counterpart of heterogeneous nuclear ribonucleoprotein R, interacts with ubiquitous synaptotagmin isoforms | journal = The Journal of Biological Chemistry | volume = 275 | issue = 13 | pages = 9823–31 | date = March 2000 | pmid = 10734137 | doi = 10.1074/jbc.275.13.9823 }} | |||
* {{cite journal | vauthors = Grosset C, Chen CY, Xu N, Sonenberg N, Jacquemin-Sablon H, Shyu AB | title = A mechanism for translationally coupled mRNA turnover: interaction between the poly(A) tail and a c-fos RNA coding determinant via a protein complex | journal = Cell | volume = 103 | issue = 1 | pages = 29–40 | date = September 2000 | pmid = 11051545 | doi = 10.1016/S0092-8674(00)00102-1 }} | |||
* {{cite journal | vauthors = Blanc V, Navaratnam N, Henderson JO, Anant S, Kennedy S, Jarmuz A, Scott J, Davidson NO | title = Identification of GRY-RBP as an apolipoprotein B RNA-binding protein that interacts with both apobec-1 and apobec-1 complementation factor to modulate C to U editing | journal = The Journal of Biological Chemistry | volume = 276 | issue = 13 | pages = 10272–83 | date = March 2001 | pmid = 11134005 | doi = 10.1074/jbc.M006435200 }} | |||
* {{cite journal | vauthors = Mourelatos Z, Abel L, Yong J, Kataoka N, Dreyfuss G | title = SMN interacts with a novel family of hnRNP and spliceosomal proteins | journal = The EMBO Journal | volume = 20 | issue = 19 | pages = 5443–52 | date = October 2001 | pmid = 11574476 | pmc = 125643 | doi = 10.1093/emboj/20.19.5443 }} | |||
* {{cite journal | vauthors = Rossoll W, Kröning AK, Ohndorf UM, Steegborn C, Jablonka S, Sendtner M | title = Specific interaction of Smn, the spinal muscular atrophy determining gene product, with hnRNP-R and gry-rbp/hnRNP-Q: a role for Smn in RNA processing in motor axons? | journal = Human Molecular Genetics | volume = 11 | issue = 1 | pages = 93–105 | date = January 2002 | pmid = 11773003 | doi = 10.1093/hmg/11.1.93 }} | |||
* {{cite journal | vauthors = Jurica MS, Licklider LJ, Gygi SR, Grigorieff N, Moore MJ | title = Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis | journal = RNA | volume = 8 | issue = 4 | pages = 426–39 | date = April 2002 | pmid = 11991638 | pmc = 1370266 | doi = 10.1017/S1355838202021088 }} | |||
* {{cite journal | vauthors = Hresko RC, Mueckler M | title = Identification of pp68 as the Tyrosine-phosphorylated Form of SYNCRIP/NSAP1. A cytoplasmic RNA-binding protein | journal = The Journal of Biological Chemistry | volume = 277 | issue = 28 | pages = 25233–8 | date = July 2002 | pmid = 11994298 | doi = 10.1074/jbc.M202556200 }} | |||
* {{cite journal | vauthors = Carty SM, Greenleaf AL | title = Hyperphosphorylated C-terminal repeat domain-associating proteins in the nuclear proteome link transcription to DNA/chromatin modification and RNA processing | journal = Molecular & Cellular Proteomics | volume = 1 | issue = 8 | pages = 598–610 | date = August 2002 | pmid = 12376575 | doi = 10.1074/mcp.M200029-MCP200 }} | |||
* {{cite journal | vauthors = Angenstein F, Evans AM, Settlage RE, Moran ST, Ling SC, Klintsova AY, Shabanowitz J, Hunt DF, Greenough WT | title = A receptor for activated C kinase is part of messenger ribonucleoprotein complexes associated with polyA-mRNAs in neurons | journal = The Journal of Neuroscience | volume = 22 | issue = 20 | pages = 8827–37 | date = October 2002 | pmid = 12388589 | doi = }} | |||
* {{cite journal | vauthors = Hinsby AM, Olsen JV, Bennett KL, Mann M | title = Signaling initiated by overexpression of the fibroblast growth factor receptor-1 investigated by mass spectrometry | journal = Molecular & Cellular Proteomics | volume = 2 | issue = 1 | pages = 29–36 | date = January 2003 | pmid = 12601080 | doi = 10.1074/mcp.M200075-MCP200 }} | |||
* {{cite journal | vauthors = Moraes KC, Quaresma AJ, Maehnss K, Kobarg J | title = Identification and characterization of proteins that selectively interact with isoforms of the mRNA binding protein AUF1 (hnRNP D) | journal = Biological Chemistry | volume = 384 | issue = 1 | pages = 25–37 | date = January 2003 | pmid = 12674497 | doi = 10.1515/BC.2003.004 }} | |||
* {{cite journal | vauthors = Kim JH, Paek KY, Ha SH, Cho S, Choi K, Kim CS, Ryu SH, Jang SK | title = A cellular RNA-binding protein enhances internal ribosomal entry site-dependent translation through an interaction downstream of the hepatitis C virus polyprotein initiation codon | journal = Molecular and Cellular Biology | volume = 24 | issue = 18 | pages = 7878–90 | date = September 2004 | pmid = 15340051 | pmc = 515056 | doi = 10.1128/MCB.24.18.7878-7890.2004 }} | |||
* {{cite journal | vauthors = Quaresma AJ, Bressan GC, Gava LM, Lanza DC, Ramos CH, Kobarg J | title = Human hnRNP Q re-localizes to cytoplasmic granules upon PMA, thapsigargin, arsenite and heat-shock treatments | journal = Experimental Cell Research | volume = 315 | issue = 6 | pages = 968–80 | date = April 2009 | pmid = 19331829 | pmc = | doi = 10.1016/j.yexcr.2009.01.012 }} | |||
* {{cite journal | vauthors = Moraes KC, Quaresma AJ, Maehnss K, Kobarg J | title = Identification and characterization of proteins that selectively interact with isoforms of the mRNA binding protein AUF1 (hnRNP D) | journal = Biological Chemistry | volume = 384 | issue = 1 | pages = 25–37 | date = January 2003 | pmid = 12674497 | doi = 10.1515/BC.2003.004 | ISSN = 1431-6730 }} | |||
{{Refend}} | |||
{{PDB Gallery|geneid=10492}} | |||
{{Gene-6-stub}} |
Latest revision as of 01:20, 28 November 2018
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External IDs | GeneCards: [1] | ||||||
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Species | Human | Mouse | |||||
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Location (UCSC) | n/a | n/a | |||||
PubMed search | n/a | n/a | |||||
Wikidata | |||||||
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Synaptotagmin binding, cytoplasmic RNA interacting protein, also known as Heterogeneous nuclear ribonucleoprotein Q is a protein that in humans is encoded by the SYNCRIP gene.[1][2][3]
Interactions
SYNCRIP has been shown to interact with ACF,[2][4] APOBEC1,[2] SYT7[5] and SYT9,[5]
References
- ↑ Harris CE, Boden RA, Astell CR (January 1999). "A novel heterogeneous nuclear ribonucleoprotein-like protein interacts with NS1 of the minute virus of mice". Journal of Virology. 73 (1): 72–80. PMC 103810. PMID 9847309.
- ↑ 2.0 2.1 2.2 Lau PP, Chang BH, Chan L (April 2001). "Two-hybrid cloning identifies an RNA-binding protein, GRY-RBP, as a component of apobec-1 editosome". Biochemical and Biophysical Research Communications. 282 (4): 977–83. doi:10.1006/bbrc.2001.4679. PMID 11352648.
- ↑ "Entrez Gene: SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein".
- ↑ Blanc V, Navaratnam N, Henderson JO, Anant S, Kennedy S, Jarmuz A, Scott J, Davidson NO (March 2001). "Identification of GRY-RBP as an apolipoprotein B RNA-binding protein that interacts with both apobec-1 and apobec-1 complementation factor to modulate C to U editing". The Journal of Biological Chemistry. 276 (13): 10272–83. doi:10.1074/jbc.M006435200. PMID 11134005.
- ↑ 5.0 5.1 Mizutani A, Fukuda M, Ibata K, Shiraishi Y, Mikoshiba K (March 2000). "SYNCRIP, a cytoplasmic counterpart of heterogeneous nuclear ribonucleoprotein R, interacts with ubiquitous synaptotagmin isoforms". The Journal of Biological Chemistry. 275 (13): 9823–31. doi:10.1074/jbc.275.13.9823. PMID 10734137.
Further reading
- Maruyama K, Sugano S (January 1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
- Fu C, Chan AC (October 1997). "Identification of two tyrosine phosphoproteins, pp70 and pp68, which interact with phospholipase Cgamma, Grb2, and Vav after B cell antigen receptor activation". The Journal of Biological Chemistry. 272 (43): 27362–8. doi:10.1074/jbc.272.43.27362. PMID 9341187.
- Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S (October 1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
- Neubauer G, King A, Rappsilber J, Calvio C, Watson M, Ajuh P, Sleeman J, Lamond A, Mann M (September 1998). "Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex". Nature Genetics. 20 (1): 46–50. doi:10.1038/1700. PMID 9731529.
- Mizutani A, Fukuda M, Ibata K, Shiraishi Y, Mikoshiba K (March 2000). "SYNCRIP, a cytoplasmic counterpart of heterogeneous nuclear ribonucleoprotein R, interacts with ubiquitous synaptotagmin isoforms". The Journal of Biological Chemistry. 275 (13): 9823–31. doi:10.1074/jbc.275.13.9823. PMID 10734137.
- Grosset C, Chen CY, Xu N, Sonenberg N, Jacquemin-Sablon H, Shyu AB (September 2000). "A mechanism for translationally coupled mRNA turnover: interaction between the poly(A) tail and a c-fos RNA coding determinant via a protein complex". Cell. 103 (1): 29–40. doi:10.1016/S0092-8674(00)00102-1. PMID 11051545.
- Blanc V, Navaratnam N, Henderson JO, Anant S, Kennedy S, Jarmuz A, Scott J, Davidson NO (March 2001). "Identification of GRY-RBP as an apolipoprotein B RNA-binding protein that interacts with both apobec-1 and apobec-1 complementation factor to modulate C to U editing". The Journal of Biological Chemistry. 276 (13): 10272–83. doi:10.1074/jbc.M006435200. PMID 11134005.
- Mourelatos Z, Abel L, Yong J, Kataoka N, Dreyfuss G (October 2001). "SMN interacts with a novel family of hnRNP and spliceosomal proteins". The EMBO Journal. 20 (19): 5443–52. doi:10.1093/emboj/20.19.5443. PMC 125643. PMID 11574476.
- Rossoll W, Kröning AK, Ohndorf UM, Steegborn C, Jablonka S, Sendtner M (January 2002). "Specific interaction of Smn, the spinal muscular atrophy determining gene product, with hnRNP-R and gry-rbp/hnRNP-Q: a role for Smn in RNA processing in motor axons?". Human Molecular Genetics. 11 (1): 93–105. doi:10.1093/hmg/11.1.93. PMID 11773003.
- Jurica MS, Licklider LJ, Gygi SR, Grigorieff N, Moore MJ (April 2002). "Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis". RNA. 8 (4): 426–39. doi:10.1017/S1355838202021088. PMC 1370266. PMID 11991638.
- Hresko RC, Mueckler M (July 2002). "Identification of pp68 as the Tyrosine-phosphorylated Form of SYNCRIP/NSAP1. A cytoplasmic RNA-binding protein". The Journal of Biological Chemistry. 277 (28): 25233–8. doi:10.1074/jbc.M202556200. PMID 11994298.
- Carty SM, Greenleaf AL (August 2002). "Hyperphosphorylated C-terminal repeat domain-associating proteins in the nuclear proteome link transcription to DNA/chromatin modification and RNA processing". Molecular & Cellular Proteomics. 1 (8): 598–610. doi:10.1074/mcp.M200029-MCP200. PMID 12376575.
- Angenstein F, Evans AM, Settlage RE, Moran ST, Ling SC, Klintsova AY, Shabanowitz J, Hunt DF, Greenough WT (October 2002). "A receptor for activated C kinase is part of messenger ribonucleoprotein complexes associated with polyA-mRNAs in neurons". The Journal of Neuroscience. 22 (20): 8827–37. PMID 12388589.
- Hinsby AM, Olsen JV, Bennett KL, Mann M (January 2003). "Signaling initiated by overexpression of the fibroblast growth factor receptor-1 investigated by mass spectrometry". Molecular & Cellular Proteomics. 2 (1): 29–36. doi:10.1074/mcp.M200075-MCP200. PMID 12601080.
- Moraes KC, Quaresma AJ, Maehnss K, Kobarg J (January 2003). "Identification and characterization of proteins that selectively interact with isoforms of the mRNA binding protein AUF1 (hnRNP D)". Biological Chemistry. 384 (1): 25–37. doi:10.1515/BC.2003.004. PMID 12674497.
- Kim JH, Paek KY, Ha SH, Cho S, Choi K, Kim CS, Ryu SH, Jang SK (September 2004). "A cellular RNA-binding protein enhances internal ribosomal entry site-dependent translation through an interaction downstream of the hepatitis C virus polyprotein initiation codon". Molecular and Cellular Biology. 24 (18): 7878–90. doi:10.1128/MCB.24.18.7878-7890.2004. PMC 515056. PMID 15340051.
- Quaresma AJ, Bressan GC, Gava LM, Lanza DC, Ramos CH, Kobarg J (April 2009). "Human hnRNP Q re-localizes to cytoplasmic granules upon PMA, thapsigargin, arsenite and heat-shock treatments". Experimental Cell Research. 315 (6): 968–80. doi:10.1016/j.yexcr.2009.01.012. PMID 19331829.
- Moraes KC, Quaresma AJ, Maehnss K, Kobarg J (January 2003). "Identification and characterization of proteins that selectively interact with isoforms of the mRNA binding protein AUF1 (hnRNP D)". Biological Chemistry. 384 (1): 25–37. doi:10.1515/BC.2003.004. ISSN 1431-6730. PMID 12674497.
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