STX7: Difference between revisions

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{{Infobox_gene}}
{{PBB_Controls
'''Syntaxin-7''' is a [[protein]] that in humans is encoded by the ''STX7'' [[gene]].<ref name="pmid9358037">{{cite journal | vauthors = Wang H, Frelin L, Pevsner J | title = Human syntaxin 7: a Pep12p/Vps6p homologue implicated in vesicle trafficking to lysosomes | journal = Gene | volume = 199 | issue = 1-2 | pages = 39–48 | date = October 1997 | pmid = 9358037 | pmc =  | doi = 10.1016/S0378-1119(97)00343-0 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: STX7 syntaxin 7| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=8417| accessdate = }}</ref>
| update_page = yes
| require_manual_inspection = no
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}


<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
In melanocytic cells STX7 gene expression may be regulated by [[Microphthalmia-associated transcription factor|MITF]].<ref name="pmid19067971">{{cite journal | vauthors = Hoek KS, Schlegel NC, Eichhoff OM, Widmer DS, Praetorius C, Einarsson SO, Valgeirsdottir S, Bergsteinsdottir K, Schepsky A, Dummer R, Steingrimsson E | title = Novel MITF targets identified using a two-step DNA microarray strategy | journal = Pigment Cell & Melanoma Research | volume = 21 | issue = 6 | pages = 665–76 | date = December 2008 | pmid = 19067971 | doi = 10.1111/j.1755-148X.2008.00505.x }}</ref>
{{GNF_Protein_box
| image = PBB_Protein_STX7_image.jpg
| image_source = [[Protein_Data_Bank|PDB]] rendering based on 1gl2.
| PDB = {{PDB2|1gl2}}
| Name = Syntaxin 7
| HGNCid = 11442
| Symbol = STX7
| AltSymbols =;
| OMIM = 603217
| ECnumber = 
| Homologene = 37823
| MGIid = 1858210
| GeneAtlas_image1 = PBB_GE_STX7_203457_at_tn.png
| GeneAtlas_image2 = PBB_GE_STX7_212631_at_tn.png
| GeneAtlas_image3 = PBB_GE_STX7_212632_at_tn.png
| Function = {{GNF_GO|id=GO:0005515 |text = protein binding}} {{GNF_GO|id=GO:0008565 |text = protein transporter activity}}
| Component = {{GNF_GO|id=GO:0005768 |text = endosome}} {{GNF_GO|id=GO:0005887 |text = integral to plasma membrane}} {{GNF_GO|id=GO:0016020 |text = membrane}}
| Process = {{GNF_GO|id=GO:0006886 |text = intracellular protein transport}} {{GNF_GO|id=GO:0006892 |text = post-Golgi vesicle-mediated transport}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 8417
    | Hs_Ensembl = ENSG00000079950
    | Hs_RefseqProtein = NP_003560
    | Hs_RefseqmRNA = NM_003569
    | Hs_GenLoc_db =
    | Hs_GenLoc_chr = 6
    | Hs_GenLoc_start = 132820747
    | Hs_GenLoc_end = 132876030
    | Hs_Uniprot = O15400
    | Mm_EntrezGene = 53331
    | Mm_Ensembl = ENSMUSG00000019998
    | Mm_RefseqmRNA = NM_016797
    | Mm_RefseqProtein = NP_058077
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 10
    | Mm_GenLoc_start = 23838776
    | Mm_GenLoc_end = 23878375
    | Mm_Uniprot = Q8BH40
  }}
}}
'''Syntaxin 7''', also known as '''STX7''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: STX7 syntaxin 7| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=8417| accessdate = }}</ref>


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{{PBB_Summary
| section_title =
| summary_text =
}}


==References==
== Interactions ==
{{reflist|2}}
==Further reading==
{{refbegin | 2}}
{{PBB_Further_reading
| citations =
*{{cite journal  | author=Wang H, Frelin L, Pevsner J |title=Human syntaxin 7: a Pep12p/Vps6p homologue implicated in vesicle trafficking to lysosomes. |journal=Gene |volume=199 |issue= 1-2 |pages= 39-48 |year= 1997 |pmid= 9358037 |doi=  }}
*{{cite journal  | author=Wong SH, Xu Y, Zhang T, Hong W |title=Syntaxin 7, a novel syntaxin member associated with the early endosomal compartment. |journal=J. Biol. Chem. |volume=273 |issue= 1 |pages= 375-80 |year= 1998 |pmid= 9417091 |doi=  }}
*{{cite journal  | author=Steegmaier M, Yang B, Yoo JS, ''et al.'' |title=Three novel proteins of the syntaxin/SNAP-25 family. |journal=J. Biol. Chem. |volume=273 |issue= 51 |pages= 34171-9 |year= 1999 |pmid= 9852078 |doi=  }}
*{{cite journal  | author=Prekeris R, Yang B, Oorschot V, ''et al.'' |title=Differential roles of syntaxin 7 and syntaxin 8 in endosomal trafficking. |journal=Mol. Biol. Cell |volume=10 |issue= 11 |pages= 3891-908 |year= 1999 |pmid= 10564279 |doi=  }}
*{{cite journal  | author=Nakamura N, Yamamoto A, Wada Y, Futai M |title=Syntaxin 7 mediates endocytic trafficking to late endosomes. |journal=J. Biol. Chem. |volume=275 |issue= 9 |pages= 6523-9 |year= 2000 |pmid= 10692457 |doi=  }}
*{{cite journal  | author=Scales SJ, Chen YA, Yoo BY, ''et al.'' |title=SNAREs contribute to the specificity of membrane fusion. |journal=Neuron |volume=26 |issue= 2 |pages= 457-64 |year= 2000 |pmid= 10839363 |doi=  }}
*{{cite journal  | author=Mullock BM, Smith CW, Ihrke G, ''et al.'' |title=Syntaxin 7 is localized to late endosome compartments, associates with Vamp 8, and Is required for late endosome-lysosome fusion. |journal=Mol. Biol. Cell |volume=11 |issue= 9 |pages= 3137-53 |year= 2000 |pmid= 10982406 |doi=  }}
*{{cite journal  | author=Antonin W, Holroyd C, Fasshauer D, ''et al.'' |title=A SNARE complex mediating fusion of late endosomes defines conserved properties of SNARE structure and function. |journal=EMBO J. |volume=19 |issue= 23 |pages= 6453-64 |year= 2001 |pmid= 11101518 |doi= 10.1093/emboj/19.23.6453 }}
*{{cite journal  | author=Wade N, Bryant NJ, Connolly LM, ''et al.'' |title=Syntaxin 7 complexes with mouse Vps10p tail interactor 1b, syntaxin 6, vesicle-associated membrane protein (VAMP)8, and VAMP7 in b16 melanoma cells. |journal=J. Biol. Chem. |volume=276 |issue= 23 |pages= 19820-7 |year= 2001 |pmid= 11278762 |doi= 10.1074/jbc.M010838200 }}
*{{cite journal  | author=Kim BY, Krämer H, Yamamoto A, ''et al.'' |title=Molecular characterization of mammalian homologues of class C Vps proteins that interact with syntaxin-7. |journal=J. Biol. Chem. |volume=276 |issue= 31 |pages= 29393-402 |year= 2001 |pmid= 11382755 |doi= 10.1074/jbc.M101778200 }}
*{{cite journal  | author=Rotem-Yehudar R, Galperin E, Horowitz M |title=Association of insulin-like growth factor 1 receptor with EHD1 and SNAP29. |journal=J. Biol. Chem. |volume=276 |issue= 35 |pages= 33054-60 |year= 2001 |pmid= 11423532 |doi= 10.1074/jbc.M009913200 }}
*{{cite journal  | author=Suzuki H, Fukunishi Y, Kagawa I, ''et al.'' |title=Protein-protein interaction panel using mouse full-length cDNAs. |journal=Genome Res. |volume=11 |issue= 10 |pages= 1758-65 |year= 2001 |pmid= 11591653 |doi= 10.1101/gr.180101 }}
*{{cite journal  | author=Antonin W, Fasshauer D, Becker S, ''et al.'' |title=Crystal structure of the endosomal SNARE complex reveals common structural principles of all SNAREs. |journal=Nat. Struct. Biol. |volume=9 |issue= 2 |pages= 107-11 |year= 2002 |pmid= 11786915 |doi= 10.1038/nsb746 }}
*{{cite journal  | author=Antonin W, Dulubova I, Arac D, ''et al.'' |title=The N-terminal domains of syntaxin 7 and vti1b form three-helix bundles that differ in their ability to regulate SNARE complex assembly. |journal=J. Biol. Chem. |volume=277 |issue= 39 |pages= 36449-56 |year= 2002 |pmid= 12114520 |doi= 10.1074/jbc.M204369200 }}
*{{cite journal  | author=Bogdanovic A, Bennett N, Kieffer S, ''et al.'' |title=Syntaxin 7, syntaxin 8, Vti1 and VAMP7 (vesicle-associated membrane protein 7) form an active SNARE complex for early macropinocytic compartment fusion in Dictyostelium discoideum. |journal=Biochem. J. |volume=368 |issue= Pt 1 |pages= 29-39 |year= 2002 |pmid= 12175335 |doi= 10.1042/BJ20020845 }}
*{{cite journal  | author=Collins RF, Schreiber AD, Grinstein S, Trimble WS |title=Syntaxins 13 and 7 function at distinct steps during phagocytosis. |journal=J. Immunol. |volume=169 |issue= 6 |pages= 3250-6 |year= 2002 |pmid= 12218144 |doi=  }}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  | author=Adkins JN, Varnum SM, Auberry KJ, ''et al.'' |title=Toward a human blood serum proteome: analysis by multidimensional separation coupled with mass spectrometry. |journal=Mol. Cell Proteomics |volume=1 |issue= 12 |pages= 947-55 |year= 2003 |pmid= 12543931 |doi=  }}
*{{cite journal  | author=Gevaert K, Goethals M, Martens L, ''et al.'' |title=Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. |journal=Nat. Biotechnol. |volume=21 |issue= 5 |pages= 566-9 |year= 2004 |pmid= 12665801 |doi= 10.1038/nbt810 }}
*{{cite journal  | author=Suzuki J, Ohnishi H, Wada A, ''et al.'' |title=Involvement of syntaxin 7 in human gastric epithelial cell vacuolation induced by the Helicobacter pylori-produced cytotoxin VacA. |journal=J. Biol. Chem. |volume=278 |issue= 28 |pages= 25585-90 |year= 2003 |pmid= 12730232 |doi= 10.1074/jbc.M212445200 }}
}}
{{refend}}


{{protein-stub}}
STX7 has been shown to [[Protein-protein interaction|interact]] with [[STX8]],<ref name=pmid11101518>{{cite journal | vauthors = Antonin W, Holroyd C, Fasshauer D, Pabst S, Von Mollard GF, Jahn R | title = A SNARE complex mediating fusion of late endosomes defines conserved properties of SNARE structure and function | journal = The EMBO Journal | volume = 19 | issue = 23 | pages = 6453–64 | date = December 2000 | pmid = 11101518 | pmc = 305878 | doi = 10.1093/emboj/19.23.6453 }}</ref> [[VPS18]],<ref name=pmid11382755>{{cite journal | vauthors = Kim BY, Krämer H, Yamamoto A, Kominami E, Kohsaka S, Akazawa C | title = Molecular characterization of mammalian homologues of class C Vps proteins that interact with syntaxin-7 | journal = The Journal of Biological Chemistry | volume = 276 | issue = 31 | pages = 29393–402 | date = August 2001 | pmid = 11382755 | doi = 10.1074/jbc.M101778200 }}</ref> [[Vesicle-associated membrane protein 8]]<ref name=pmid11101518/><ref name=pmid11278762>{{cite journal | vauthors = Wade N, Bryant NJ, Connolly LM, Simpson RJ, Luzio JP, Piper RC, James DE | title = Syntaxin 7 complexes with mouse Vps10p tail interactor 1b, syntaxin 6, vesicle-associated membrane protein (VAMP)8, and VAMP7 in b16 melanoma cells | journal = The Journal of Biological Chemistry | volume = 276 | issue = 23 | pages = 19820–7 | date = June 2001 | pmid = 11278762 | doi = 10.1074/jbc.M010838200 }}</ref> and [[VPS11]].<ref name=pmid11382755/>
{{WikiDoc Sources}}
 
== References ==
{{Reflist}}
 
== Further reading ==
{{Refbegin | 2}}
* {{cite journal | vauthors = Wong SH, Xu Y, Zhang T, Hong W | title = Syntaxin 7, a novel syntaxin member associated with the early endosomal compartment | journal = The Journal of Biological Chemistry | volume = 273 | issue = 1 | pages = 375–80 | date = January 1998 | pmid = 9417091 | doi = 10.1074/jbc.273.1.375 }}
* {{cite journal | vauthors = Steegmaier M, Yang B, Yoo JS, Huang B, Shen M, Yu S, Luo Y, Scheller RH | title = Three novel proteins of the syntaxin/SNAP-25 family | journal = The Journal of Biological Chemistry | volume = 273 | issue = 51 | pages = 34171–9 | date = December 1998 | pmid = 9852078 | doi = 10.1074/jbc.273.51.34171 }}
* {{cite journal | vauthors = Prekeris R, Yang B, Oorschot V, Klumperman J, Scheller RH | title = Differential roles of syntaxin 7 and syntaxin 8 in endosomal trafficking | journal = Molecular Biology of the Cell | volume = 10 | issue = 11 | pages = 3891–908 | date = November 1999 | pmid = 10564279 | pmc = 25687 | doi = 10.1091/mbc.10.11.3891 }}
* {{cite journal | vauthors = Nakamura N, Yamamoto A, Wada Y, Futai M | title = Syntaxin 7 mediates endocytic trafficking to late endosomes | journal = The Journal of Biological Chemistry | volume = 275 | issue = 9 | pages = 6523–9 | date = March 2000 | pmid = 10692457 | doi = 10.1074/jbc.275.9.6523 }}
* {{cite journal | vauthors = Scales SJ, Chen YA, Yoo BY, Patel SM, Doung YC, Scheller RH | title = SNAREs contribute to the specificity of membrane fusion | journal = Neuron | volume = 26 | issue = 2 | pages = 457–64 | date = May 2000 | pmid = 10839363 | doi = 10.1016/S0896-6273(00)81177-0 }}
* {{cite journal | vauthors = Mullock BM, Smith CW, Ihrke G, Bright NA, Lindsay M, Parkinson EJ, Brooks DA, Parton RG, James DE, Luzio JP, Piper RC | title = Syntaxin 7 is localized to late endosome compartments, associates with Vamp 8, and Is required for late endosome-lysosome fusion | journal = Molecular Biology of the Cell | volume = 11 | issue = 9 | pages = 3137–53 | date = September 2000 | pmid = 10982406 | pmc = 14981 | doi = 10.1091/mbc.11.9.3137 }}
* {{cite journal | vauthors = Antonin W, Holroyd C, Fasshauer D, Pabst S, Von Mollard GF, Jahn R | title = A SNARE complex mediating fusion of late endosomes defines conserved properties of SNARE structure and function | journal = The EMBO Journal | volume = 19 | issue = 23 | pages = 6453–64 | date = December 2000 | pmid = 11101518 | pmc = 305878 | doi = 10.1093/emboj/19.23.6453 }}
* {{cite journal | vauthors = Wade N, Bryant NJ, Connolly LM, Simpson RJ, Luzio JP, Piper RC, James DE | title = Syntaxin 7 complexes with mouse Vps10p tail interactor 1b, syntaxin 6, vesicle-associated membrane protein (VAMP)8, and VAMP7 in b16 melanoma cells | journal = The Journal of Biological Chemistry | volume = 276 | issue = 23 | pages = 19820–7 | date = June 2001 | pmid = 11278762 | doi = 10.1074/jbc.M010838200 }}
* {{cite journal | vauthors = Kim BY, Krämer H, Yamamoto A, Kominami E, Kohsaka S, Akazawa C | title = Molecular characterization of mammalian homologues of class C Vps proteins that interact with syntaxin-7 | journal = The Journal of Biological Chemistry | volume = 276 | issue = 31 | pages = 29393–402 | date = August 2001 | pmid = 11382755 | doi = 10.1074/jbc.M101778200 }}
* {{cite journal | vauthors = Rotem-Yehudar R, Galperin E, Horowitz M | title = Association of insulin-like growth factor 1 receptor with EHD1 and SNAP29 | journal = The Journal of Biological Chemistry | volume = 276 | issue = 35 | pages = 33054–60 | date = August 2001 | pmid = 11423532 | doi = 10.1074/jbc.M009913200 }}
* {{cite journal | vauthors = Suzuki H, Fukunishi Y, Kagawa I, Saito R, Oda H, Endo T, Kondo S, Bono H, Okazaki Y, Hayashizaki Y | title = Protein-protein interaction panel using mouse full-length cDNAs | journal = Genome Research | volume = 11 | issue = 10 | pages = 1758–65 | date = October 2001 | pmid = 11591653 | pmc = 311163 | doi = 10.1101/gr.180101 }}
* {{cite journal | vauthors = Antonin W, Fasshauer D, Becker S, Jahn R, Schneider TR | title = Crystal structure of the endosomal SNARE complex reveals common structural principles of all SNAREs | journal = Nature Structural Biology | volume = 9 | issue = 2 | pages = 107–11 | date = February 2002 | pmid = 11786915 | doi = 10.1038/nsb746 }}
* {{cite journal | vauthors = Antonin W, Dulubova I, Arac D, Pabst S, Plitzner J, Rizo J, Jahn R | title = The N-terminal domains of syntaxin 7 and vti1b form three-helix bundles that differ in their ability to regulate SNARE complex assembly | journal = The Journal of Biological Chemistry | volume = 277 | issue = 39 | pages = 36449–56 | date = September 2002 | pmid = 12114520 | doi = 10.1074/jbc.M204369200 }}
* {{cite journal | vauthors = Bogdanovic A, Bennett N, Kieffer S, Louwagie M, Morio T, Garin J, Satre M, Bruckert F | title = Syntaxin 7, syntaxin 8, Vti1 and VAMP7 (vesicle-associated membrane protein 7) form an active SNARE complex for early macropinocytic compartment fusion in Dictyostelium discoideum | journal = The Biochemical Journal | volume = 368 | issue = Pt 1 | pages = 29–39 | date = November 2002 | pmid = 12175335 | pmc = 1222979 | doi = 10.1042/BJ20020845 }}
* {{cite journal | vauthors = Collins RF, Schreiber AD, Grinstein S, Trimble WS | title = Syntaxins 13 and 7 function at distinct steps during phagocytosis | journal = Journal of Immunology | volume = 169 | issue = 6 | pages = 3250–6 | date = September 2002 | pmid = 12218144 | doi = 10.4049/jimmunol.169.6.3250 }}
* {{cite journal | vauthors = Adkins JN, Varnum SM, Auberry KJ, Moore RJ, Angell NH, Smith RD, Springer DL, Pounds JG | title = Toward a human blood serum proteome: analysis by multidimensional separation coupled with mass spectrometry | journal = Molecular & Cellular Proteomics | volume = 1 | issue = 12 | pages = 947–55 | date = December 2002 | pmid = 12543931 | doi = 10.1074/mcp.M200066-MCP200 }}
* {{cite journal | vauthors = Gevaert K, Goethals M, Martens L, Van Damme J, Staes A, Thomas GR, Vandekerckhove J | title = Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides | journal = Nature Biotechnology | volume = 21 | issue = 5 | pages = 566–9 | date = May 2003 | pmid = 12665801 | doi = 10.1038/nbt810 }}
* {{cite journal | vauthors = Suzuki J, Ohnishi H, Wada A, Hirayama T, Ohno H, Ueda N, Yasuda H, Iiri T, Wada Y, Futai M, Mashima H | title = Involvement of syntaxin 7 in human gastric epithelial cell vacuolation induced by the Helicobacter pylori-produced cytotoxin VacA | journal = The Journal of Biological Chemistry | volume = 278 | issue = 28 | pages = 25585–90 | date = July 2003 | pmid = 12730232 | doi = 10.1074/jbc.M212445200 }}
{{Refend}}
 
 
{{PDB Gallery|geneid=8417}}
{{Vesicular transport proteins}}
{{Gene-6-stub}}

Latest revision as of 07:15, 11 September 2017

VALUE_ERROR (nil)
Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Syntaxin-7 is a protein that in humans is encoded by the STX7 gene.[1][2]

In melanocytic cells STX7 gene expression may be regulated by MITF.[3]


Interactions

STX7 has been shown to interact with STX8,[4] VPS18,[5] Vesicle-associated membrane protein 8[4][6] and VPS11.[5]

References

  1. Wang H, Frelin L, Pevsner J (October 1997). "Human syntaxin 7: a Pep12p/Vps6p homologue implicated in vesicle trafficking to lysosomes". Gene. 199 (1–2): 39–48. doi:10.1016/S0378-1119(97)00343-0. PMID 9358037.
  2. "Entrez Gene: STX7 syntaxin 7".
  3. Hoek KS, Schlegel NC, Eichhoff OM, Widmer DS, Praetorius C, Einarsson SO, Valgeirsdottir S, Bergsteinsdottir K, Schepsky A, Dummer R, Steingrimsson E (December 2008). "Novel MITF targets identified using a two-step DNA microarray strategy". Pigment Cell & Melanoma Research. 21 (6): 665–76. doi:10.1111/j.1755-148X.2008.00505.x. PMID 19067971.
  4. 4.0 4.1 Antonin W, Holroyd C, Fasshauer D, Pabst S, Von Mollard GF, Jahn R (December 2000). "A SNARE complex mediating fusion of late endosomes defines conserved properties of SNARE structure and function". The EMBO Journal. 19 (23): 6453–64. doi:10.1093/emboj/19.23.6453. PMC 305878. PMID 11101518.
  5. 5.0 5.1 Kim BY, Krämer H, Yamamoto A, Kominami E, Kohsaka S, Akazawa C (August 2001). "Molecular characterization of mammalian homologues of class C Vps proteins that interact with syntaxin-7". The Journal of Biological Chemistry. 276 (31): 29393–402. doi:10.1074/jbc.M101778200. PMID 11382755.
  6. Wade N, Bryant NJ, Connolly LM, Simpson RJ, Luzio JP, Piper RC, James DE (June 2001). "Syntaxin 7 complexes with mouse Vps10p tail interactor 1b, syntaxin 6, vesicle-associated membrane protein (VAMP)8, and VAMP7 in b16 melanoma cells". The Journal of Biological Chemistry. 276 (23): 19820–7. doi:10.1074/jbc.M010838200. PMID 11278762.

Further reading