SLC35C1: Difference between revisions

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Latest revision as of 06:32, 11 September 2017

GDP-fucose transporter 1 is a protein that in humans is encoded by the SLC35C1 gene.^[1]^[2]^[3]

Defects can be associated with Congenital disorder of glycosylation type IIc.

References

↑ Luhn K, Wild MK, Eckhardt M, Gerardy-Schahn R, Vestweber D (Apr 2001). "The gene defective in leukocyte adhesion deficiency II encodes a putative GDP-fucose transporter". Nat Genet. 28 (1): 69–72. doi:10.1038/88289. PMID 11326279.
↑ Lubke T, Marquardt T, Etzioni A, Hartmann E, von Figura K, Korner C (Apr 2001). "Complementation cloning identifies CDG-IIc, a new type of congenital disorders of glycosylation, as a GDP-fucose transporter deficiency". Nat Genet. 28 (1): 73–6. doi:10.1038/88299. PMID 11326280.
↑ "Entrez Gene: SLC35C1 solute carrier family 35, member C1".

Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
Hidalgo A, Ma S, Peired AJ, et al. (2003). "Insights into leukocyte adhesion deficiency type 2 from a novel mutation in the GDP-fucose transporter gene". Blood. 101 (5): 1705–12. doi:10.1182/blood-2002-09-2840. PMID 12406889.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Helmus Y, Denecke J, Yakubenia S, et al. (2006). "Leukocyte adhesion deficiency II patients with a dual defect of the GDP-fucose transporter". Blood. 107 (10): 3959–66. doi:10.1182/blood-2005-08-3334. PMID 16455955.

External links

GeneReviews/NCBI/NIH/UW entry on Congenital Disorders of Glycosylation Overview

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

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[pmid11326279-1] Luhn K, Wild MK, Eckhardt M, Gerardy-Schahn R, Vestweber D (Apr 2001). "The gene defective in leukocyte adhesion deficiency II encodes a putative GDP-fucose transporter". Nat Genet. 28 (1): 69–72. doi:10.1038/88289. PMID 11326279.

[pmid11326280-2] Lubke T, Marquardt T, Etzioni A, Hartmann E, von Figura K, Korner C (Apr 2001). "Complementation cloning identifies CDG-IIc, a new type of congenital disorders of glycosylation, as a GDP-fucose transporter deficiency". Nat Genet. 28 (1): 73–6. doi:10.1038/88299. PMID 11326280.

[entrez-3] "Entrez Gene: SLC35C1 solute carrier family 35, member C1".

[1]

[2]

[3]

@@ Line 1: / Line 1: @@
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+{{Infobox_gene}}
-{{PBB_Controls
+'''GDP-fucose transporter 1''' is a [[protein]] that in humans is encoded by the ''SLC35C1'' [[gene]].<ref name="pmid11326279">{{cite journal | vauthors = Luhn K, Wild MK, Eckhardt M, Gerardy-Schahn R, Vestweber D | title = The gene defective in leukocyte adhesion deficiency II encodes a putative GDP-fucose transporter | journal = Nat Genet | volume = 28 | issue = 1 | pages = 69–72 |date=Apr 2001 | pmid = 11326279 | pmc =  | doi = 10.1038/88289 }}</ref><ref name="pmid11326280">{{cite journal | vauthors = Lubke T, Marquardt T, Etzioni A, Hartmann E, von Figura K, Korner C | title = Complementation cloning identifies CDG-IIc, a new type of congenital disorders of glycosylation, as a GDP-fucose transporter deficiency | journal = Nat Genet | volume = 28 | issue = 1 | pages = 73–6 |date=Apr 2001 | pmid = 11326280 | pmc =  | doi = 10.1038/88299 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: SLC35C1 solute carrier family 35, member C1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=55343| accessdate = }}</ref>
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- | image =
- | image_source =
- | PDB =
- | Name = Solute carrier family 35, member C1
- | HGNCid = 20197
- | Symbol = SLC35C1
- | AltSymbols =; FLJ11320; FLJ14841; FUCT1
- | OMIM = 605881
- | ECnumber =
- | Homologene = 41258
- | MGIid = 2443301
-  | GeneAtlas_image1 = PBB_GE_SLC35C1_218485_s_at_tn.png
- | Function = {{GNF_GO|id=GO:0005351 |text = sugar:hydrogen ion symporter activity}}
- | Component = {{GNF_GO|id=GO:0016020 |text = membrane}} {{GNF_GO|id=GO:0016021 |text = integral to membrane}}
- | Process = {{GNF_GO|id=GO:0006810 |text = transport}}
- | Orthologs = {{GNF_Ortholog_box
-    | Hs_EntrezGene = 55343
-    | Hs_Ensembl = ENSG00000181830
-    | Hs_RefseqProtein = NP_060859
-    | Hs_RefseqmRNA = NM_018389
-    | Hs_GenLoc_db =
-    | Hs_GenLoc_chr = 11
-    | Hs_GenLoc_start = 45783217
-    | Hs_GenLoc_end = 45791142
-    | Hs_Uniprot = Q96A29
-    | Mm_EntrezGene = 228368
-    | Mm_Ensembl = ENSMUSG00000049922
-    | Mm_RefseqmRNA = NM_145832
-    | Mm_RefseqProtein = NP_665831
-    | Mm_GenLoc_db =
-    | Mm_GenLoc_chr = 2
-    | Mm_GenLoc_start = 92253594
-    | Mm_GenLoc_end = 92261357
-    | Mm_Uniprot =
-  }}
-}}
-'''Solute carrier family 35, member C1''', also known as '''SLC35C1''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: SLC35C1 solute carrier family 35, member C1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=55343| accessdate = }}</ref>
 <!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
@@ Line 53: / Line 7: @@
 | summary_text =
 }}
+Defects can be associated with [[Congenital disorder of glycosylation type IIc]].
 ==See also==
 * [[Solute carrier family]]
+* [[EamA]]
 ==References==
-{{reflist|2}}
+{{reflist}}
 ==Further reading==
@@ Line 64: / Line 21: @@
 {{PBB_Further_reading
 | citations =
-*{{cite journal  | author=Maruyama K, Sugano S |title=Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. |journal=Gene |volume=138 |issue= 1-2 |pages= 171-4 |year= 1994 |pmid= 8125298 |doi=  }}
+*{{cite journal  | vauthors=Maruyama K, Sugano S |title=Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. |journal=Gene |volume=138 |issue= 1–2 |pages= 171–4 |year= 1994 |pmid= 8125298 |doi=10.1016/0378-1119(94)90802-8  }}
-*{{cite journal  | author=Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, ''et al.'' |title=Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library. |journal=Gene |volume=200 |issue= 1-2 |pages= 149-56 |year= 1997 |pmid= 9373149 |doi=  }}
+*{{cite journal   |vauthors=Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, etal |title=Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library |journal=Gene |volume=200 |issue= 1–2 |pages= 149–56 |year= 1997 |pmid= 9373149 |doi=10.1016/S0378-1119(97)00411-3  }}
-*{{cite journal  | author=Lühn K, Wild MK, Eckhardt M, ''et al.'' |title=The gene defective in leukocyte adhesion deficiency II encodes a putative GDP-fucose transporter. |journal=Nat. Genet. |volume=28 |issue= 1 |pages= 69-72 |year= 2001 |pmid= 11326279 |doi= 10.1038/88289 }}
+*{{cite journal   |vauthors=Hidalgo A, Ma S, Peired AJ, etal |title=Insights into leukocyte adhesion deficiency type 2 from a novel mutation in the GDP-fucose transporter gene |journal=Blood |volume=101 |issue= 5 |pages= 1705–12 |year= 2003 |pmid= 12406889 |doi= 10.1182/blood-2002-09-2840 }}
-*{{cite journal  | author=Lübke T, Marquardt T, Etzioni A, ''et al.'' |title=Complementation cloning identifies CDG-IIc, a new type of congenital disorders of glycosylation, as a GDP-fucose transporter deficiency. |journal=Nat. Genet. |volume=28 |issue= 1 |pages= 73-6 |year= 2001 |pmid= 11326280 |doi= 10.1038/88299 }}
+*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 }}
-*{{cite journal  | author=Hidalgo A, Ma S, Peired AJ, ''et al.'' |title=Insights into leukocyte adhesion deficiency type 2 from a novel mutation in the GDP-fucose transporter gene. |journal=Blood |volume=101 |issue= 5 |pages= 1705-12 |year= 2003 |pmid= 12406889 |doi= 10.1182/blood-2002-09-2840 }}
+*{{cite journal   |vauthors=Ota T, Suzuki Y, Nishikawa T, etal |title=Complete sequencing and characterization of 21,243 full-length human cDNAs |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
+*{{cite journal   |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC) |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504  | pmc=528928 }}
-*{{cite journal  | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
+*{{cite journal   |vauthors=Helmus Y, Denecke J, Yakubenia S, etal |title=Leukocyte adhesion deficiency II patients with a dual defect of the GDP-fucose transporter |journal=Blood |volume=107 |issue= 10 |pages= 3959–66 |year= 2006 |pmid= 16455955 |doi= 10.1182/blood-2005-08-3334 }}
-*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
-*{{cite journal  | author=Helmus Y, Denecke J, Yakubenia S, ''et al.'' |title=Leukocyte adhesion deficiency II patients with a dual defect of the GDP-fucose transporter. |journal=Blood |volume=107 |issue= 10 |pages= 3959-66 |year= 2006 |pmid= 16455955 |doi= 10.1182/blood-2005-08-3334 }}
 }}
 {{refend}}
-{{membrane-protein-stub}}
+==External links==
+* [https://www.ncbi.nlm.nih.gov/books/NBK1332/  GeneReviews/NCBI/NIH/UW entry on Congenital Disorders of Glycosylation Overview]
 {{NLM content}}
 {{Membrane transport proteins}}
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+{{PBB_Controls
+| update_page = yes
+| require_manual_inspection = no
+| update_protein_box = yes
+| update_summary = yes
+| update_citations = yes
+}}
 [[Category:Solute carrier family]]
-{{WikiDoc Sources}}
+{{membrane-protein-stub}}

SLC35C1: Difference between revisions

Latest revision as of 06:32, 11 September 2017

Contents

See also

References

Further reading

External links

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