Hac1p gene transcriptions

Associate Editor(s)-in-Chief: Henry A. Hoff

Human genes

Interactions

Consensus sequences

The upstream activating sequence (UAS) for Hac1p is 5'-CAGCGTG-3'.^[1]

Samplings

Copying 5'-CAGCGTG-3' in "⌘F" yields none between ZSCAN22 and A1BG and none between ZNF497 and A1BG as can be found by the computer programs.

For the Basic programs testing consensus sequence CAGCGTG (starting with SuccessablesHac.bas) written to compare nucleotide sequences with the sequences on either the template strand (-), or coding strand (+), of the DNA, in the negative direction (-), or the positive direction (+), the programs are, are looking for, and found:

negative strand, negative direction, looking for CAGCGTG, 0.
negative strand, positive direction, looking for CAGCGTG, 0.
positive strand, negative direction, looking for CAGCGTG, 1, CAGCGTG at 740.
positive strand, positive direction, looking for CAGCGTG, 0.
complement, negative strand, negative direction, looking for GTCGCAC, 1, GTCGCAC at 740.
complement, negative strand, positive direction, looking for GTCGCAC, 0.
complement, positive strand, negative direction, looking for GTCGCAC, 0.
complement, positive strand, positive direction, looking for GTCGCAC, 0.
inverse complement, negative strand, negative direction, looking for CACGCTG, 0.
inverse complement, negative strand, positive direction, looking for CACGCTG, 1, CACGCTG at 778.
inverse complement, positive strand, negative direction, looking for CACGCTG, 0.
inverse complement, positive strand, positive direction, looking for CACGCTG, 0.
inverse negative strand, negative direction, looking for GTGCGAC, 0.
inverse negative strand, positive direction, looking for GTGCGAC, 0.
inverse positive strand, negative direction, looking for GTGCGAC, 0.
inverse positive strand, positive direction, looking for GTGCGAC, 1, GTGCGAC at 778.

Hac distal promoters

Positive strand: CAGCGTG at 740, and complement.

Negative strand: CACGCTG at 778, and complement.

References

↑ Hongting Tang, Yanling Wu, Jiliang Deng, Nanzhu Chen, Zhaohui Zheng, Yongjun Wei, Xiaozhou Luo, and Jay D. Keasling (6 August 2020). "Promoter Architecture and Promoter Engineering in Saccharomyces cerevisiae". Metabolites. 10 (8): 320–39. doi:10.3390/metabo10080320. PMID 32781665 Check |pmid= value (help). Retrieved 18 September 2020.

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transcriptions Shoot specific element gene transcriptions Sip4p gene transcriptions Smp1p gene transcriptions Sp1 gene transcriptions Spaceflight gene expressions Specificity protein gene transcriptions STAT gene transcriptions Ste12p gene transcriptions Sterol response element gene transcriptions Sucrose box gene transcriptions Synaptic Activity-Responsive Elements TACTAAC box gene transcriptions TAGteam gene transcriptions Tapetum box gene transcriptions TATA binding protein associated factor gene transcriptions TATA binding protein gene transcriptions TATA box actin/cytoskeleton/contractile family TATA box albumin family TATA box aldolase family TATA box alkaline phosphatase family TATA box annexin family TATA box cytochrome superfamily TATA box gene transcriptions TATA box heat shock family TATA box histone family TATA box human genes TATA box keratin family TATA box lipase family TATA box peptidase family TATA box platelet-derived growth factor family TATA box selenium-binding 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