NFIC (gene): Difference between revisions

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Nuclear factor 1 C-type is a protein that in humans is encoded by the NFIC gene.^[1]^[2]^[3]

References

↑ Santoro C, Mermod N, Andrews PC, Tjian R (Aug 1988). "A family of human CCAAT-box-binding proteins active in transcription and DNA replication: cloning and expression of multiple cDNAs". Nature. 334 (6179): 218–24. doi:10.1038/334218a0. PMID 3398920.
↑ Qian F, Kruse U, Lichter P, Sippel AE (Dec 1995). "Chromosomal localization of the four genes (NFIA, B, C, and X) for the human transcription factor nuclear factor I by FISH". Genomics. 28 (1): 66–73. doi:10.1006/geno.1995.1107. PMID 7590749.
↑ "Entrez Gene: NFIC nuclear factor I/C (CCAAT-binding transcription factor)".

Blau J, Xiao H, McCracken S, et al. (1996). "Three functional classes of transcriptional activation domain". Mol. Cell. Biol. 16 (5): 2044–55. PMC 231191. PMID 8628270.
Wenzelides S, Altmann H, Wendler W, Winnacker EL (1996). "CTF5--a new transcriptional activator of the NFI/CTF family". Nucleic Acids Res. 24 (12): 2416–21. doi:10.1093/nar/24.12.2416. PMC 145930. PMID 8710515.
Liu Y, Bernard HU, Apt D (1997). "NFI-B3, a novel transcriptional repressor of the nuclear factor I family, is generated by alternative RNA processing". J. Biol. Chem. 272 (16): 10739–45. doi:10.1074/jbc.272.16.10739. PMID 9099724.
Nogues G, Kadener S, Cramer P, et al. (2003). "Transcriptional activators differ in their abilities to control alternative splicing". J. Biol. Chem. 277 (45): 43110–4. doi:10.1074/jbc.M208418200. PMID 12221105.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Norquay LD, Yang X, Sheppard P, et al. (2003). "RFX1 and NF-1 associate with P sequences of the human growth hormone locus in pituitary chromatin". Mol. Endocrinol. 17 (6): 1027–38. doi:10.1210/me.2003-0025. PMID 12624117.
Wickenheisser JK, Nelson-DeGrave VL, Quinn PG, McAllister JM (2004). "Increased cytochrome P450 17alpha-hydroxylase promoter function in theca cells isolated from patients with polycystic ovary syndrome involves nuclear factor-1". Mol. Endocrinol. 18 (3): 588–605. doi:10.1210/me.2003-0090. PMID 14684846.
Grimwood J, Gordon LA, Olsen A, et al. (2004). "The DNA sequence and biology of human chromosome 19". Nature. 428 (6982): 529–35. doi:10.1038/nature02399. PMID 15057824.
Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. doi:10.1073/pnas.0404720101. PMC 514446. PMID 15302935.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Zhao LH, Ba XQ, Wang XG, et al. (2005). "BAF complex is closely related to and interacts with NF1/CTF and RNA polymerase II in gene transcriptional activation". Acta Biochim. Biophys. Sin. (Shanghai). 37 (7): 440–6. doi:10.1111/j.1745-7270.2005.00061.x. PMID 15999204.
Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514.
Nilsson J, Bjursell G, Kannius-Janson M (2006). "Nuclear Jak2 and transcription factor NF1-C2: a novel mechanism of prolactin signaling in mammary epithelial cells". Mol. Cell. Biol. 26 (15): 5663–74. doi:10.1128/MCB.02095-05. PMC 1592781. PMID 16847321.
Olsen JV, Blagoev B, Gnad F, et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983.
Hebbar PB, Archer TK (2007). "Chromatin-dependent cooperativity between site-specific transcription factors in vivo". J. Biol. Chem. 282 (11): 8284–91. doi:10.1074/jbc.M610554200. PMC 2528297. PMID 17186943.

External links

NFIC+protein,+human at the US National Library of Medicine Medical Subject Headings (MeSH)

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

This article on a gene on human chromosome 19 is a stub. You can help Wikipedia by expanding it.

[pmid3398920-1] Santoro C, Mermod N, Andrews PC, Tjian R (Aug 1988). "A family of human CCAAT-box-binding proteins active in transcription and DNA replication: cloning and expression of multiple cDNAs". Nature. 334 (6179): 218–24. doi:10.1038/334218a0. PMID 3398920.

[pmid7590749-2] Qian F, Kruse U, Lichter P, Sippel AE (Dec 1995). "Chromosomal localization of the four genes (NFIA, B, C, and X) for the human transcription factor nuclear factor I by FISH". Genomics. 28 (1): 66–73. doi:10.1006/geno.1995.1107. PMID 7590749.

[entrez-3] "Entrez Gene: NFIC nuclear factor I/C (CCAAT-binding transcription factor)".

[1]

[2]

[3]

@@ Line 1: / Line 1: @@
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+{{Underlinked|date=June 2016}}
-{{PBB_Controls
+{{DISPLAYTITLE:''NFIC'' (gene)}}
-| update_page = yes
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-| require_manual_inspection = no
+'''Nuclear factor 1 C-type''' is a [[protein]] that in humans is encoded by the ''NFIC'' [[gene]].<ref name="pmid3398920">{{cite journal | vauthors = Santoro C, Mermod N, Andrews PC, Tjian R | title = A family of human CCAAT-box-binding proteins active in transcription and DNA replication: cloning and expression of multiple cDNAs | journal = Nature | volume = 334 | issue = 6179 | pages = 218–24 |date=Aug 1988 | pmid = 3398920 | pmc =  | doi = 10.1038/334218a0 }}</ref><ref name="pmid7590749">{{cite journal | vauthors = Qian F, Kruse U, Lichter P, Sippel AE | title = Chromosomal localization of the four genes (NFIA, B, C, and X) for the human transcription factor nuclear factor I by FISH | journal = Genomics | volume = 28 | issue = 1 | pages = 66–73 |date=Dec 1995 | pmid = 7590749 | pmc =  | doi = 10.1006/geno.1995.1107 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: NFIC nuclear factor I/C (CCAAT-binding transcription factor)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=4782| accessdate = }}</ref>
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-{{GNF_Protein_box
- | image =
- | image_source =
- | PDB =
- | Name = Nuclear factor I/C (CCAAT-binding transcription factor)
- | HGNCid = 7786
- | Symbol = NFIC
- | AltSymbols =; CTF; CTF5; MGC20153; NF-I; NFI
- | OMIM = 600729
- | ECnumber =
- | Homologene = 4088
- | MGIid = 109591
-  | GeneAtlas_image1 = PBB_GE_NFIC_206929_s_at_tn.png
- | GeneAtlas_image2 = PBB_GE_NFIC_213298_at_tn.png
- | Function = {{GNF_GO|id=GO:0003700 |text = transcription factor activity}}
- | Component = {{GNF_GO|id=GO:0005622 |text = intracellular}} {{GNF_GO|id=GO:0005634 |text = nucleus}}
- | Process = {{GNF_GO|id=GO:0006260 |text = DNA replication}} {{GNF_GO|id=GO:0006350 |text = transcription}} {{GNF_GO|id=GO:0006355 |text = regulation of transcription, DNA-dependent}} {{GNF_GO|id=GO:0006366 |text = transcription from RNA polymerase II promoter}} {{GNF_GO|id=GO:0042475 |text = odontogenesis (sensu Vertebrata)}}
- | Orthologs = {{GNF_Ortholog_box
-    | Hs_EntrezGene = 4782
-    | Hs_Ensembl = ENSG00000141905
-    | Hs_RefseqProtein = NP_005588
-    | Hs_RefseqmRNA = NM_005597
-    | Hs_GenLoc_db =
-    | Hs_GenLoc_chr = 19
-    | Hs_GenLoc_start = 3310616
-    | Hs_GenLoc_end = 3414603
-    | Hs_Uniprot = P08651
-    | Mm_EntrezGene = 18029
-    | Mm_Ensembl = ENSMUSG00000055053
-    | Mm_RefseqmRNA = NM_008688
-    | Mm_RefseqProtein = NP_032714
-    | Mm_GenLoc_db =
-    | Mm_GenLoc_chr = 10
-    | Mm_GenLoc_start = 80799320
-    | Mm_GenLoc_end = 80830302
-    | Mm_Uniprot = Q3UHA6
-  }}
-}}
-'''Nuclear factor I/C (CCAAT-binding transcription factor)''', also known as '''NFIC''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: NFIC nuclear factor I/C (CCAAT-binding transcription factor)| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=4782| accessdate = }}</ref>
 <!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
 {{PBB_Summary
@@ Line 56: / Line 10: @@
 ==References==
-{{reflist|2}}
+{{reflist}}
 ==Further reading==
 {{refbegin | 2}}
 {{PBB_Further_reading
 | citations =
-*{{cite journal  | author=Santoro C, Mermod N, Andrews PC, Tjian R |title=A family of human CCAAT-box-binding proteins active in transcription and DNA replication: cloning and expression of multiple cDNAs. |journal=Nature |volume=334 |issue= 6179 |pages= 218-24 |year= 1988 |pmid= 3398920 |doi= 10.1038/334218a0 }}
+*{{cite journal   |vauthors=Blau J, Xiao H, McCracken S, etal |title=Three functional classes of transcriptional activation domain. |journal=Mol. Cell. Biol. |volume=16 |issue= 5 |pages= 2044–55 |year= 1996 |pmid= 8628270 |doi=  | pmc=231191  }}
-*{{cite journal  | author=Qian F, Kruse U, Lichter P, Sippel AE |title=Chromosomal localization of the four genes (NFIA, B, C, and X) for the human transcription factor nuclear factor I by FISH. |journal=Genomics |volume=28 |issue= 1 |pages= 66-73 |year= 1995 |pmid= 7590749 |doi= 10.1006/geno.1995.1107 }}
+*{{cite journal  | vauthors=Wenzelides S, Altmann H, Wendler W, Winnacker EL |title=CTF5--a new transcriptional activator of the NFI/CTF family. |journal=Nucleic Acids Res. |volume=24 |issue= 12 |pages= 2416–21 |year= 1996 |pmid= 8710515 |doi=10.1093/nar/24.12.2416  | pmc=145930  }}
-*{{cite journal  | author=Blau J, Xiao H, McCracken S, ''et al.'' |title=Three functional classes of transcriptional activation domain. |journal=Mol. Cell. Biol. |volume=16 |issue= 5 |pages= 2044-55 |year= 1996 |pmid= 8628270 |doi=  }}
+*{{cite journal  | vauthors=Liu Y, Bernard HU, Apt D |title=NFI-B3, a novel transcriptional repressor of the nuclear factor I family, is generated by alternative RNA processing. |journal=J. Biol. Chem. |volume=272 |issue= 16 |pages= 10739–45 |year= 1997 |pmid= 9099724 |doi=10.1074/jbc.272.16.10739  }}
-*{{cite journal  | author=Wenzelides S, Altmann H, Wendler W, Winnacker EL |title=CTF5--a new transcriptional activator of the NFI/CTF family. |journal=Nucleic Acids Res. |volume=24 |issue= 12 |pages= 2416-21 |year= 1996 |pmid= 8710515 |doi=  }}
+*{{cite journal   |vauthors=Nogues G, Kadener S, Cramer P, etal |title=Transcriptional activators differ in their abilities to control alternative splicing. |journal=J. Biol. Chem. |volume=277 |issue= 45 |pages= 43110–4 |year= 2003 |pmid= 12221105 |doi= 10.1074/jbc.M208418200 }}
-*{{cite journal  | author=Liu Y, Bernard HU, Apt D |title=NFI-B3, a novel transcriptional repressor of the nuclear factor I family, is generated by alternative RNA processing. |journal=J. Biol. Chem. |volume=272 |issue= 16 |pages= 10739-45 |year= 1997 |pmid= 9099724 |doi=  }}
+*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 }}
-*{{cite journal  | author=Nogues G, Kadener S, Cramer P, ''et al.'' |title=Transcriptional activators differ in their abilities to control alternative splicing. |journal=J. Biol. Chem. |volume=277 |issue= 45 |pages= 43110-4 |year= 2003 |pmid= 12221105 |doi= 10.1074/jbc.M208418200 }}
+*{{cite journal   |vauthors=Norquay LD, Yang X, Sheppard P, etal |title=RFX1 and NF-1 associate with P sequences of the human growth hormone locus in pituitary chromatin. |journal=Mol. Endocrinol. |volume=17 |issue= 6 |pages= 1027–38 |year= 2003 |pmid= 12624117 |doi= 10.1210/me.2003-0025 }}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
+*{{cite journal  | vauthors=Wickenheisser JK, Nelson-DeGrave VL, Quinn PG, McAllister JM |title=Increased cytochrome P450 17alpha-hydroxylase promoter function in theca cells isolated from patients with polycystic ovary syndrome involves nuclear factor-1. |journal=Mol. Endocrinol. |volume=18 |issue= 3 |pages= 588–605 |year= 2004 |pmid= 14684846 |doi= 10.1210/me.2003-0090 }}
-*{{cite journal  | author=Norquay LD, Yang X, Sheppard P, ''et al.'' |title=RFX1 and NF-1 associate with P sequences of the human growth hormone locus in pituitary chromatin. |journal=Mol. Endocrinol. |volume=17 |issue= 6 |pages= 1027-38 |year= 2003 |pmid= 12624117 |doi= 10.1210/me.2003-0025 }}
+*{{cite journal   |vauthors=Grimwood J, Gordon LA, Olsen A, etal |title=The DNA sequence and biology of human chromosome 19. |journal=Nature |volume=428 |issue= 6982 |pages= 529–35 |year= 2004 |pmid= 15057824 |doi= 10.1038/nature02399 }}
-*{{cite journal  | author=Wickenheisser JK, Nelson-DeGrave VL, Quinn PG, McAllister JM |title=Increased cytochrome P450 17alpha-hydroxylase promoter function in theca cells isolated from patients with polycystic ovary syndrome involves nuclear factor-1. |journal=Mol. Endocrinol. |volume=18 |issue= 3 |pages= 588-605 |year= 2004 |pmid= 14684846 |doi= 10.1210/me.2003-0090 }}
+*{{cite journal   |vauthors=Beausoleil SA, Jedrychowski M, Schwartz D, etal |title=Large-scale characterization of HeLa cell nuclear phosphoproteins. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 33 |pages= 12130–5 |year= 2004 |pmid= 15302935 |doi= 10.1073/pnas.0404720101  | pmc=514446 }}
-*{{cite journal  | author=Grimwood J, Gordon LA, Olsen A, ''et al.'' |title=The DNA sequence and biology of human chromosome 19. |journal=Nature |volume=428 |issue= 6982 |pages= 529-35 |year= 2004 |pmid= 15057824 |doi= 10.1038/nature02399 }}
+*{{cite journal   |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504  | pmc=528928 }}
-*{{cite journal  | author=Beausoleil SA, Jedrychowski M, Schwartz D, ''et al.'' |title=Large-scale characterization of HeLa cell nuclear phosphoproteins. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 33 |pages= 12130-5 |year= 2004 |pmid= 15302935 |doi= 10.1073/pnas.0404720101 }}
+*{{cite journal   |vauthors=Zhao LH, Ba XQ, Wang XG, etal |title=BAF complex is closely related to and interacts with NF1/CTF and RNA polymerase II in gene transcriptional activation. |journal=Acta Biochim. Biophys. Sin. (Shanghai) |volume=37 |issue= 7 |pages= 440–6 |year= 2005 |pmid= 15999204 |doi=10.1111/j.1745-7270.2005.00061.x  }}
-*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
+*{{cite journal   |vauthors=Rual JF, Venkatesan K, Hao T, etal |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
-*{{cite journal  | author=Zhao LH, Ba XQ, Wang XG, ''et al.'' |title=BAF complex is closely related to and interacts with NF1/CTF and RNA polymerase II in gene transcriptional activation. |journal=Acta Biochim. Biophys. Sin. (Shanghai) |volume=37 |issue= 7 |pages= 440-6 |year= 2005 |pmid= 15999204 |doi=  }}
+*{{cite journal  | vauthors=Nilsson J, Bjursell G, Kannius-Janson M |title=Nuclear Jak2 and transcription factor NF1-C2: a novel mechanism of prolactin signaling in mammary epithelial cells. |journal=Mol. Cell. Biol. |volume=26 |issue= 15 |pages= 5663–74 |year= 2006 |pmid= 16847321 |doi= 10.1128/MCB.02095-05  | pmc=1592781 }}
-*{{cite journal  | author=Rual JF, Venkatesan K, Hao T, ''et al.'' |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173-8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
+*{{cite journal   |vauthors=Olsen JV, Blagoev B, Gnad F, etal |title=Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. |journal=Cell |volume=127 |issue= 3 |pages= 635–48 |year= 2006 |pmid= 17081983 |doi= 10.1016/j.cell.2006.09.026 }}
-*{{cite journal  | author=Nilsson J, Bjursell G, Kannius-Janson M |title=Nuclear Jak2 and transcription factor NF1-C2: a novel mechanism of prolactin signaling in mammary epithelial cells. |journal=Mol. Cell. Biol. |volume=26 |issue= 15 |pages= 5663-74 |year= 2006 |pmid= 16847321 |doi= 10.1128/MCB.02095-05 }}
+*{{cite journal  | vauthors=Hebbar PB, Archer TK |title=Chromatin-dependent cooperativity between site-specific transcription factors in vivo. |journal=J. Biol. Chem. |volume=282 |issue= 11 |pages= 8284–91 |year= 2007 |pmid= 17186943 |doi= 10.1074/jbc.M610554200  | pmc=2528297 }}
-*{{cite journal  | author=Olsen JV, Blagoev B, Gnad F, ''et al.'' |title=Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. |journal=Cell |volume=127 |issue= 3 |pages= 635-48 |year= 2006 |pmid= 17081983 |doi= 10.1016/j.cell.2006.09.026 }}
-*{{cite journal  | author=Hebbar PB, Archer TK |title=Chromatin-dependent cooperativity between site-specific transcription factors in vivo. |journal=J. Biol. Chem. |volume=282 |issue= 11 |pages= 8284-91 |year= 2007 |pmid= 17186943 |doi= 10.1074/jbc.M610554200 }}
 }}
 {{refend}}
@@ Line 84: / Line 37: @@
 * {{MeshName|NFIC+protein,+human}}
+{{NLM content}}
+{{Transcription factors|g1}}
+<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
+{{PBB_Controls
+| update_page = yes
+| require_manual_inspection = no
+| update_protein_box = yes
+| update_summary = yes
+| update_citations = yes
+}}
-{{protein-stub}}
-{{NLM content}}
-{{Transcription factors}}
 [[Category:Transcription factors]]
-{{WikiDoc Sources}}
+{{gene-19-stub}}

NFIC (gene): Difference between revisions

Revision as of 12:52, 5 September 2017

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